Results for the query structure 1an2

Database Search Result
Name of database:DNA-Protein complexes (2262 PDB)
Size of database:2262 structures
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No.
Target Structure
Z-score
Structure Overlap
RMSD
# CA , C3' atoms of target
# CA , C3' atoms of query
Match Size
Match Size of Protein
Match Size of DNA
#Identical Residues
Target SCOP ids
Target Description
1 1an2 11.22 100.00 0.00 108 108 108 86 22 108 a.38.1.1 DNA & PROTEIN (TRANSCRIPTION FACTOR MAX (TF MAX))
2 1nlw 7.69 85.19 1.12 378 108 92 74 18 29 a.38.1.1 DNA & MAX PROTEIN
3 1nkp 6.66 89.81 1.58 411 108 97 79 18 38 a.38.1.1 DNA & MAX PROTEIN
4 1hlo 5.84 69.44 1.06 175 108 75 64 11 63 a.38.1.1 DNA & PROTEIN (TRANSCRIPTION FACTOR MAX)
5 4h10 5.75 69.44 1.17 153 108 75 60 15 24 No_SCOP_id ARYL HYDROCARBON RECEPTOR NUCLEAR TRANSLOCATOR-LIKE PROTEIN 1 & CIRCADIAN LOCOMOTER OUTPUT CYCLES PROTEIN KAPUT & E-BOX DNA SENSE STRAND & E-BOX DNA ANTISENSE STRAND
6 1mdy 5.55 64.81 1.06 310 108 70 55 15 17 a.38.1.1 DNA & PROTEIN (MYOD BHLH DOMAIN)
7 4ati 5.22 66.67 1.23 160 108 72 56 16 24 No_SCOP_id MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR & DNA & DNA
8 2ql2 5.14 63.89 1.11 294 108 69 54 15 21 No_SCOP_id TRANSCRIPTION FACTOR E2-ALPHA & NEUROGENIC DIFFERENTIATION FACTOR 1 & DNA & DNA
9 2dgc 4.69 66.18 1.33 68 108 45 45 0 5 h.1.3.1 DNA & PROTEIN (GCN4)
10 4atk 4.31 64.81 1.37 152 108 70 54 16 20 No_SCOP_id MICROPHTHALMIA-ASSOCIATED TRANSCRIPTION FACTOR & DNA
11 1am9 4.23 70.37 1.64 389 108 76 58 18 24 a.38.1.1 DNA & PROTEIN (STEROL REGULATORY ELEMENT BINDING PROTEIN 1A)
12 1dgc 4.08 62.16 1.42 74 108 46 46 0 10 h.1.3.1 DNA & PROTEIN (GCN4)
13 1h88 3.90 60.19 1.46 345 108 65 65 0 13 a.4.1.3;h.1.3.1 CCAAT/ENHANCER BINDING PROTEIN BETA & MYB PROTO-ONCOGENE PROTEIN & DNA & DNA
14 2l45 3.58 52.00 1.21 25 108 13 13 0 1 No_SCOP_id C-TERMINAL ZINC KNUCLE OF THE HIV-NCP7 & DNA
15 1hjb 3.41 58.33 1.54 613 108 63 63 0 10 b.2.5.6;h.1.3.1 CCAAT/ENHANCER BINDING PROTEIN BETA & RUNT-RELATED TRANSCRIPTION FACTOR 1 & DNA & DNA
16 2wty 3.37 62.04 1.70 230 108 67 65 2 5 No_SCOP_id TRANSCRIPTION FACTOR MAFB & DNA & DNA
17 1h8a 3.33 58.33 1.51 292 108 63 63 0 12 a.4.1.3;h.1.3.1 CAAT/ENHANCER BINDING PROTEIN BETA & MYB TRANSFORMING PROTEIN & DNA & DNA
18 1h89 3.16 54.63 1.48 295 108 59 58 1 10 a.4.1.3;h.1.3.1 CAAT/ENHANCER BINDING PROTEIN BETA & MYB PROTO-ONCOGENE PROTEIN & DNA & DNA
19 1gd2 3.16 63.89 1.84 360 108 69 66 3 7 h.1.3.1 DNA & TRANSCRIPTION FACTOR PAP1
20 1nwq 3.08 52.78 1.44 162 108 57 56 1 12 h.1.3.1 DNA & CCAAT/ENHANCER BINDING PROTEIN ALPHA
21 1io4 2.96 54.63 1.61 433 108 59 59 0 12 b.2.5.6;b.54.1.1;h.1.3.1 CSF-1R PROMOTER & CSF-1R PROMOTER & CAAT/ENHANCER BINDING PROTEIN BETA & RUNT-RELATED TRANSCRIPTION FACTOR 1 & CORE-BINDING FACTOR, BETA SUBUNIT
22 1gu5 2.67 58.33 1.82 164 108 63 63 0 13 h.1.3.1 CAAT/ENHANCER BINDING PROTEIN BETA & DNA & DNA
23 1dh3 2.63 50.00 1.56 152 108 54 54 0 7 h.1.3.1 DNA & TRANSCRIPTION FACTOR CREB
24 3ltn 2.63 49.07 1.60 1442 108 53 53 0 7 e.11.1.0;e.78.1.1 DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
25 1s9k 2.63 52.78 1.63 425 108 57 55 2 5 b.1.18.1;b.2.5.3;h.1.3.1 HUMAN IL-2 ARRE1 PROMOTER ELEMENT, PLUS STRAND & HUMAN IL-2 ARRE1 PROMOTER ELEMENT, MINUS STRAND & NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2 & PROTO-ONCOGENE PROTEIN C-FOS & TRANSCRIPTION FACTOR AP-1
26 1gtw 2.63 58.33 1.87 164 108 63 62 1 13 h.1.3.1 CAAT/ENHANCER BINDING PROTEIN BETA & DNA & DNA
27 1llm 2.50 52.78 1.75 198 108 57 56 1 5 g.37.1.1 DNA & CHIMERA OF ZIF23-GCN4
28 3hpo 2.46 42.59 1.27 597 108 46 46 0 3 No_SCOP_id DNA POLYMERASE I, LARGE FRAGMENT & DNA & DNA
29 3k9f 2.42 44.44 1.44 1442 108 48 48 0 1 e.11.1.1;e.78.1.1 DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
30 2e43 2.42 53.70 1.70 158 108 58 57 1 11 h.1.3.1 CCAAT/ENHANCER-BINDING PROTEIN BETA & DNA & DNA
31 1hvn 2.34 43.48 1.49 23 108 10 10 0 0 g.40.1.1 DNA & HIV-1 NUCLEOCAPSID ZINC FINGER
32 3d71 2.34 46.30 1.62 300 108 50 50 0 6 a.6.1.3;d.60.1.1 MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR & BMR PROMOTER DNA
33 2e42 2.34 54.63 1.79 164 108 59 59 0 12 h.1.3.1 CCAAT/ENHANCER-BINDING PROTEIN BETA & DNA & DNA
34 1jnm 2.30 40.74 1.21 153 108 44 44 0 1 h.1.3.1 DNA & PROTO-ONCOGENE C-JUN
35 3a5t 2.30 43.52 1.54 210 108 47 47 0 3 No_SCOP_id TRANSCRIPTION FACTOR MAFG & DNA & DNA
36 3l4j 2.30 48.15 1.66 772 108 52 52 0 4 e.11.1.1 DNA TOPOISOMERASE 2 & DNA & DNA & DNA & DNA
37 1gu4 2.30 55.56 1.87 164 108 60 60 0 12 h.1.3.1 CAAT/ENHANCER BINDING PROTEIN BETA & DNA & DNA
38 1r8e 2.26 43.52 1.49 298 108 47 47 0 5 a.6.1.3;d.60.1.1 DNA & MULTIDRUG-EFFLUX TRANSPORTER REGULATOR
39 3rad 2.26 45.37 1.54 1417 108 49 49 0 1 No_SCOP_id DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
40 3l4k 2.26 49.07 1.71 772 108 53 53 0 4 e.11.1.1 DNA TOPOISOMERASE 2 & DNA & DNA & DNA & DNA
41 2wt7 2.26 55.56 1.89 185 108 60 59 1 6 No_SCOP_id PROTO-ONCOGENE PROTEIN C-FOS & TRANSCRIPTION FACTOR MAFB & MODIFIED T-MARE MOTIF & MODIFIED T-MARE MOTIF
42 1bg1 2.22 53.70 1.95 576 108 58 58 0 2 a.47.1.1;b.2.5.5;d.93.1.1 DNA & PROTEIN (TRANSCRIPTION FACTOR STAT3B)
43 3ksb 2.18 42.59 1.46 1409 108 46 46 0 1 e.11.1.1;e.78.1.1 DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA
44 3px4 2.18 42.59 1.60 1165 108 46 46 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
45 3ted 2.18 50.00 1.71 253 108 54 54 0 7 No_SCOP_id CHROMO DOMAIN-CONTAINING PROTEIN 1 & DNA & DNA
46 2c9n 2.18 52.78 1.79 140 108 57 56 1 10 h.1.3.1 BZLF1 TRANS-ACTIVATOR PROTEIN & DNA & DNA
47 1clq 2.18 53.70 1.97 926 108 58 58 0 3 c.55.3.5;e.8.1.1 DNA & PROTEIN (DNA POLYMERASE)
48 1exi 2.13 36.11 1.06 296 108 39 39 0 5 a.6.1.3;d.60.1.1 DNA & MULTIDRUG-EFFLUX TRANSPORTER REGULATOR
49 1u4b 2.13 39.81 1.41 602 108 43 43 0 3 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH 8-OXOGUANINE & DNA POLYMERASE I
50 3uiq 2.13 44.44 1.63 932 108 48 48 0 5 c.55.3.5;e.8.1.1 DNA POLYMERASE & DNA & DNA
51 4dse 2.09 41.67 1.47 1162 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA & DNA
52 4dsf 2.09 41.67 1.47 1162 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA & DNA
53 3thv 2.09 41.67 1.57 1198 108 45 45 0 2 No_SCOP_id DNA POLYMERASE I & DNA & DNA
54 2gm4 2.09 46.30 1.78 423 108 50 50 0 3 a.4.1.2;c.53.1.1 DNA & TRANSPOSON GAMMA-DELTA RESOLVASE
55 1a02 2.05 40.74 1.36 425 108 44 44 0 5 b.1.18.1;b.2.5.3;h.1.3.1 DNA & AP-1 FRAGMENT JUN
56 3ez5 2.05 39.81 1.40 1201 108 43 43 0 3 c.55.3.5;e.8.1.1 DNA POLYMERASE I & DNA & DNA
57 1qss 2.05 43.52 1.45 564 108 47 47 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
58 4ds5 2.05 41.67 1.46 1179 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA & DNA
59 2hvh 2.05 39.81 1.49 1196 108 43 43 0 3 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
60 4dqp 2.05 41.67 1.55 1195 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA & DNA
61 3px0 2.05 41.67 1.56 1176 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
62 3tan 2.05 42.59 1.56 601 108 46 46 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
63 3bdp 2.05 40.74 1.57 599 108 44 44 0 3 c.55.3.5;e.8.1.1 DNA & PROTEIN (DNA POLYMERASE I)
64 3ht3 2.05 43.52 1.60 1198 108 47 47 0 1 No_SCOP_id DNA POLYMERASE I, LARGE FRAGMENT & DNA & DNA
65 2dpd 2.01 41.67 1.49 274 108 45 45 0 3 a.4.5.7 DNA & REPLICATION TERMINATION PROTEIN
66 3pv8 2.01 41.67 1.56 1198 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
67 3on0 2.01 39.81 1.58 488 108 43 43 0 5 No_SCOP_id PROTEIN TRAM & SBMA
68 3epl 2.01 45.37 1.75 941 108 49 49 0 6 No_SCOP_id TRNA ISOPENTENYLTRANSFERASE & TRNA & TRNA
69 2h7h 2.01 50.00 1.77 154 108 54 53 1 3 h.1.3.1 DNA & VIRAL JUN TRANSFORMING PROTEIN
70 3ktq 1.97 43.52 1.46 564 108 47 47 0 5 c.55.3.5;e.8.1.1 DNA & PROTEIN (LARGE FRAGMENT OF DNA POLYMERASE I)
71 3d70 1.97 42.59 1.56 299 108 46 46 0 5 a.6.1.3;d.60.1.1 BMR PROMOTER DNA & MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR
72 3vea 1.97 54.63 1.96 344 108 59 51 8 5 No_SCOP_id MACRODOMAIN TER PROTEIN & DNA & DNA
73 1flo 1.97 55.56 2.07 1751 108 60 60 0 4 a.60.9.1;d.163.1.1 SYMMETRIZED FRT DNA SITES & SYMMETRIZED FRT DNA SITES & FLP RECOMBINASE
74 1exj 1.93 37.04 1.27 296 108 40 40 0 4 a.6.1.3;d.60.1.1 DNA & MULTIDRUG-EFFLUX TRANSPORTER REGULATOR
75 4dqi 1.93 40.74 1.51 1198 108 44 44 0 2 No_SCOP_id DNA POLYMERASE I & DNA & DNA
76 1knz 1.93 40.74 1.53 1188 108 44 44 0 3 e.34.1.1 5'-R(*UP*GP*AP*CP*C)-3' & NONSTRUCTURAL RNA-BINDING PROTEIN 34
77 3k0s 1.93 51.85 1.97 1575 108 56 56 0 6 No_SCOP_id DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
78 2hhw 1.89 39.81 1.38 1196 108 43 43 0 3 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
79 2dpu 1.89 42.59 1.50 136 108 46 46 0 3 a.4.5.7 DNA & REPLICATION TERMINATION PROTEIN
80 1dc1 1.89 42.59 1.58 645 108 46 45 1 0 c.52.1.11 DNA & BSOBI RESTRICTION ENDONUCLEASE
81 4dqr 1.89 41.67 1.58 1198 108 45 45 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA & DNA
82 1ig9 1.89 45.37 1.84 932 108 49 49 0 6 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
83 3q3d 1.85 37.96 1.35 299 108 41 41 0 4 No_SCOP_id MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR & BMRR PROMOTER DNA
84 4dl5 1.85 43.52 1.76 442 108 47 47 0 2 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
85 2c9l 1.85 53.70 2.01 162 108 58 56 2 11 h.1.3.1 BZLF1 TRANS-ACTIVATOR PROTEIN & DNA & DNA
86 3v1z 1.81 37.96 1.49 605 108 41 41 0 1 c.52.1.7 ENDONUCLEASE BSE634IR & DNA
87 2ajq 1.81 40.74 1.61 1688 108 44 44 0 3 c.47.1.1;c.55.3.5;e.8.1.1 DNA PRIMER & DNA TEMPLATE & T7 DNA POLYMERASE & THIOREDOXIN 1
88 3an2 1.81 42.59 1.66 944 108 46 45 1 3 No_SCOP_id HISTONE H3-LIKE CENTROMERIC PROTEIN A & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 147 MER DNA
89 1t2k 1.81 45.37 1.77 403 108 49 49 0 4 a.4.5.23;h.1.3.1 31-MER & 31-MER & INTERFERON REGULATORY FACTOR 3 & TRANSCRIPTION FACTOR AP-1 & CYCLIC-AMP-DEPENDENT TRANSCRIPTION FACTOR ATF-2
90 3p57 1.81 43.52 1.80 733 108 47 47 0 4 d.88.1.1 MYOCYTE-SPECIFIC ENHANCER FACTOR 2A & DNA & DNA & HISTONE ACETYLTRANSFERASE P300
91 3r8f 1.81 44.44 1.81 1288 108 48 48 0 2 No_SCOP_id CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA & DNA
92 4dm0 1.81 50.00 1.95 500 108 54 52 2 5 c.55.3.4 TRANSPOSASE FOR TRANSPOSON TN5 & DNA TRANSFERRED STRAND & DNA NON-TRANSFERRED STRAND
93 3d6z 1.76 38.89 1.45 301 108 42 42 0 4 a.6.1.3;d.60.1.1 MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR & BMR PROMOTER DNA
94 2hvi 1.76 39.81 1.46 1200 108 43 43 0 3 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
95 1jt0 1.76 42.59 1.59 805 108 46 44 2 3 a.4.1.9;a.121.1.1 QACA OPERATOR & HYPOTHETICAL TRANSCRIPTIONAL REGULATOR IN QACA 5'REGION
96 3raf 1.76 39.81 1.59 1418 108 43 43 0 3 No_SCOP_id DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
97 3ti0 1.76 39.81 1.61 1198 108 43 43 0 3 No_SCOP_id DNA POLYMERASE I & DNA & DNA
98 3px6 1.76 40.74 1.62 1200 108 44 44 0 2 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
99 2wtf 1.76 43.52 1.78 1061 108 47 47 0 2 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
100 1o3t 1.76 43.52 1.82 458 108 47 47 0 2 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR PROTEIN
101 3q1m 1.72 35.19 1.20 299 108 38 38 0 3 No_SCOP_id MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR & 23 BP PROMOTER DNA
102 4dqq 1.72 39.81 1.45 1203 108 43 43 0 3 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA & DNA
103 1f4k 1.72 39.81 1.51 272 108 43 43 0 3 a.4.5.7 DNA & REPLICATION TERMINATION PROTEIN
104 3v20 1.72 37.96 1.54 604 108 41 40 1 2 c.52.1.7 ENDONUCLEASE BSE634IR & DNA
105 1kfs 1.72 39.81 1.64 604 108 43 43 0 2 c.55.3.5;e.8.1.1 DNA & PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7))
106 2efw 1.72 43.52 1.69 529 108 47 47 0 2 a.4.5.7 REPLICATION TERMINATION PROTEIN & DNA & DNA
107 1m1a 1.72 43.52 1.71 1059 108 47 43 4 5 a.22.1.1 PALINDROMIC 146 BASE PAIR DNA FRAGMENT & HISTONE H3.2 & HISTONE H4 & HISTONE H2A.1 & HISTONE H2B.1
108 1ivs 1.72 41.67 1.72 1874 108 45 45 0 3 a.2.7.3;a.27.1.1;b.51.1.1;c.26.1.1 TRNA (VAL) & VALYL-TRNA SYNTHETASE
109 2r8k 1.72 45.37 1.93 1060 108 49 49 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
110 1q9y 1.72 48.15 2.01 932 108 52 52 0 6 c.55.3.5;e.8.1.1 5'-AC(8-OXOGUANOSINE)GGTAAGCAGTCCGCG-3' & 5'-GCGGACTGCTTAC(DIDEOXYCYTIDINE)-3' & DNA POLYMERASE
111 1rtd 1.68 41.67 1.72 2028 108 45 45 0 2 c.55.3.1;e.8.1.2 DNA TEMPLATE FOR REVERSE TRANSCRIPTASE & DNA PRIMER FOR REVERSE TRANSCRIPTASE & PROTEIN (REVERSE TRANSCRIPTASE) & PROTEIN (REVERSE TRANSCRIPTASE)
112 2bpa 1.68 46.30 1.90 641 108 50 50 0 0 b.121.5.1 PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174) & PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174) & PROTEIN (SUBUNIT OF BACTERIOPHAGE PHIX174) & DNA
113 2bte 1.68 50.93 2.00 1908 108 55 55 0 5 No_SCOP_id AMINOACYL-TRNA SYNTHETASE & TRNALEU TRANSCRIPT WITH ANTICODON CAG
114 1ysa 1.64 40.74 1.54 154 108 44 44 0 2 h.1.3.1 DNA & PROTEIN (GCN4)
115 1qtm 1.64 40.74 1.58 564 108 44 44 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
116 2qsg 1.64 41.67 1.73 602 108 45 42 3 1 a.189.1.0 DNA REPAIR PROTEIN RAD4 & UV EXCISION REPAIR PROTEIN RAD23 & NATIVE STRAND OF THE CPD-MISMATCH DNA & DAMAGED STRAND OF THE CPD-MISMATCH DNA
117 1c0w 1.64 38.89 1.74 784 108 42 42 0 3 a.4.5.24;a.76.1.1;b.34.1.2 DNA & DIPHTHERIA TOXIN REPRESSOR
118 1oh5 1.64 44.44 1.87 1577 108 48 47 1 5 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
119 1rb8 1.64 46.30 1.95 639 108 50 50 0 0 b.121.5.1 CAPSID PROTEIN & MAJOR SPIKE PROTEIN & SMALL CORE PROTEIN & DNA
120 3ecp 1.64 50.93 2.04 498 108 55 53 2 5 c.55.3.4 TN5 TRANSPOSASE & DNA TRANSFERRED STRAND & DNA NON-TRANSFERRED STRAND
121 1oh8 1.64 52.78 2.10 1570 108 57 57 0 6 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
122 1oh6 1.64 54.63 2.17 1574 108 59 59 0 6 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
123 3cmy 1.63 32.00 1.20 75 108 24 19 5 0 a.4.1.1 PAIRED BOX PROTEIN PAX-3 & DNA & DNA
124 4dle 1.60 37.96 1.51 534 108 41 41 0 5 No_SCOP_id DNA POLYMERASE I, THERMOSTABLE & DNA PRIMER & DNA TEMPLATE
125 1qp9 1.60 38.89 1.58 373 108 42 42 0 4 g.38.1.1;h.1.3.1 DNA & CYP1(HAP1-PC7) ACTIVATORY PROTEIN
126 3rae 1.60 39.81 1.70 1417 108 43 43 0 3 e.11.1.0;e.78.1.1 DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
127 2gij 1.60 38.89 1.71 509 108 42 42 0 1 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINCII
128 2hap 1.60 44.44 1.76 191 108 48 44 4 1 g.38.1.1;h.1.3.1 DNA & PROTEIN (HEME ACTIVATOR PROTEIN)
129 1tw8 1.60 41.67 1.77 1077 108 45 45 0 2 c.52.1.19 DNA & HINC II ENDONUCLEASE
130 2gih 1.60 39.81 1.80 536 108 43 43 0 1 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINCII
131 2vtb 1.60 40.74 1.83 2967 108 44 44 0 4 No_SCOP_id CRYPTOCHROME DASH & CRYPTOCHROME DASH & DNA
132 3ksa 1.60 44.44 1.92 1422 108 48 48 0 5 No_SCOP_id DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
133 3lap 1.60 50.00 2.04 1005 108 54 49 5 2 No_SCOP_id ARGININE REPRESSOR & DNA & DNA
134 1uaa 1.60 49.07 2.07 1285 108 53 53 0 2 c.37.1.19 DNA & PROTEIN (ATP-DEPENDENT DNA HELICASE REP.)
135 1ig7 1.57 37.93 1.48 87 108 33 33 0 2 a.4.1.1 DNA & HOMEOTIC PROTEIN MSX-1
136 3fof 1.56 36.11 1.38 1330 108 39 39 0 2 No_SCOP_id DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
137 1hbx 1.56 35.19 1.39 673 108 38 38 0 2 a.4.5.21;d.88.1.1 SERUM RESPONSE FACTOR & ETS-DOMAIN PROTEIN ELK-4 & DNA & DNA
138 1n6j 1.56 36.11 1.40 237 108 39 39 0 5 d.88.1.1 DNA & CALCINEURIN-BINDING PROTEIN CABIN 1
139 1p3b 1.56 37.04 1.48 1048 108 40 40 0 3 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
140 2xb2 1.56 37.04 1.50 1409 108 40 39 1 4 No_SCOP_id EUKARYOTIC INITIATION FACTOR 4A-III & RNA POLY-U-RIBONUCLEOTIDE & REGULATOR OF NONSENSE TRANSCRIPTS 3B & PUTATIVE REGULATOR OF NONSENSE TRANSCRIPTS 3B & RNA-BINDING PROTEIN 8A & PROTEIN MAGO NASHI HOMOLOG & PROTEIN CASC3
141 2db3 1.56 36.11 1.51 1705 108 39 38 1 3 No_SCOP_id 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3' & ATP-DEPENDENT RNA HELICASE VASA
142 1run 1.56 37.96 1.55 460 108 41 41 0 1 a.4.5.4;b.82.3.2 DNA & PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP) )
143 1tau 1.56 41.67 1.68 809 108 45 45 0 5 a.60.7.1;c.55.3.5;c.120.1.2;e.8.1.1 DNA & PROTEIN (TAQ POLYMERASE)
144 2isz 1.56 37.04 1.72 626 108 40 40 0 4 a.4.5.24;a.76.1.1 MBTA/MBTB OPERATOR STRAND 1 & MBTA/MBTB OPERATOR STRAND 2 & IRON-DEPENDENT REPRESSOR IDER
145 3e42 1.56 38.89 1.74 516 108 42 42 0 1 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA
146 3rel 1.56 41.67 1.83 1049 108 45 42 3 3 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (146-MER)
147 2ix1 1.56 43.52 1.84 656 108 47 47 0 5 b.40.4.5;b.40.4.16 EXORIBONUCLEASE 2 & DNA
148 1ph6 1.56 43.52 1.85 704 108 47 47 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
149 1ph4 1.56 43.52 1.91 712 108 47 47 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
150 1qu3 1.56 48.15 1.99 955 108 52 52 0 4 a.27.1.1;b.51.1.1;c.26.1.1 ISOLEUCYL-TRNA & ISOLEUCYL-TRNA SYNTHETASE
151 3hx0 1.56 48.15 2.03 1401 108 52 50 2 3 No_SCOP_id DNA POLYMERASE LAMBDA & DNA & DNA & DNA
152 1hwt 1.52 35.19 1.52 367 108 38 38 0 3 g.38.1.1;h.1.3.1 DNA & PROTEIN (HEME ACTIVATOR PROTEIN)
153 1wb9 1.52 38.89 1.59 1577 108 42 42 0 3 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
154 1tkd 1.52 36.11 1.63 836 108 39 39 0 1 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
155 3e43 1.52 39.81 1.79 516 108 43 43 0 1 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA
156 3e44 1.52 37.96 1.79 516 108 41 41 0 1 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA & DNA
157 1njw 1.52 39.81 1.80 603 108 43 43 0 6 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
158 1ph2 1.52 42.59 1.81 708 108 46 46 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
159 3azn 1.52 40.74 1.81 1048 108 44 41 3 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
160 3rek 1.52 41.67 1.82 1049 108 45 42 3 3 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A TYPE1 & HISTONE H2B 1.1 & DNA (146-MER)
161 2pyo 1.52 40.74 1.83 1067 108 44 41 3 2 a.22.1.1 DNA (147-MER) & DNA (147-MER) & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
162 3kuy 1.52 40.74 1.83 1053 108 44 41 3 2 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B & DNA (145-MER) & DNA (145-MER)
163 1jb7 1.52 44.44 1.91 712 108 48 48 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
164 3lds 1.52 47.22 1.97 933 108 51 51 0 4 c.55.3.5;e.8.1.1 DNA POLYMERASE & DNA & DNA
165 2wtu 1.52 47.22 1.99 1561 108 51 51 0 3 No_SCOP_id DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
166 1fos 1.52 52.78 2.04 314 108 57 56 1 6 h.1.3.1 DNA & C-JUN PROTO-ONCOGENE PROTEIN
167 3lnq 1.51 40.70 1.85 86 108 35 35 0 3 a.4.1.1 HOMEOBOX PROTEIN ARISTALESS & DNA & DNA
168 2oh2 1.48 34.26 1.42 918 108 37 36 1 2 No_SCOP_id DNA & DNA POLYMERASE KAPPA
169 3q2y 1.48 37.04 1.59 299 108 40 40 0 5 No_SCOP_id MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR & 23 BP PROMOTER
170 1mnm 1.48 37.04 1.60 372 108 40 40 0 2 a.4.1.1;d.88.1.1 DNA (STE6 OPERATOR DNA) & DNA (STE6 OPERATOR DNA) & PROTEIN (MCM1 TRANSCRIPTIONAL REGULATOR) & PROTEIN (MAT ALPHA-2 TRANSCRIPTIONAL REPRESSOR)
171 1t7p 1.48 36.11 1.62 790 108 39 39 0 1 c.47.1.1;c.55.3.5;e.8.1.1 DNA & PROTEIN (THIOREDOXIN)
172 1tk8 1.48 36.11 1.63 832 108 39 39 0 1 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
173 1d0e 1.48 37.96 1.67 538 108 41 41 0 4 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
174 1jfi 1.48 39.81 1.69 417 108 43 43 0 3 a.22.1.3;d.129.1.1 DNA & TATA-BOX-BINDING PROTEIN (TBP)
175 1tl8 1.48 39.81 1.69 607 108 43 43 0 5 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
176 3azh 1.48 39.81 1.73 1045 108 43 40 3 1 No_SCOP_id HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
177 3azm 1.48 38.89 1.73 1045 108 42 39 3 3 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
178 1nkc 1.48 38.89 1.76 610 108 42 42 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
179 1nk8 1.48 39.81 1.77 603 108 43 43 0 6 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
180 2nqb 1.48 40.74 1.77 1054 108 44 41 3 3 a.22.1.1 ALPHA-SATELLITE DNA & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
181 2qsh 1.48 39.81 1.77 602 108 43 42 1 1 a.189.1.0 DNA REPAIR PROTEIN RAD4 & UV EXCISION REPAIR PROTEIN RAD23 & TOP STRAND OF THE MISMATCH DNA & BOTTOM STRAND OF THE MISMATCH DNA
182 3c1c 1.48 39.81 1.77 1041 108 43 40 3 2 a.22.1.1 HISTONE H3-LIKE & HISTONE H4 & HISTONE H2A TYPE 1 & HISTONE 2, H2BF & PALINDROMIC 146BP HUMAN ALPHA SATELLITE DNA
183 3lel 1.48 40.74 1.77 2128 108 44 41 3 2 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 147-MER DNA & 147-MER DNA
184 1nk4 1.48 39.81 1.79 599 108 43 43 0 6 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
185 3azl 1.48 40.74 1.79 1050 108 44 41 3 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
186 3afa 1.48 40.74 1.81 1050 108 44 41 3 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
187 3uta 1.48 39.81 1.81 1055 108 43 40 3 3 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 145-MER DNA & 145-MER DNA
188 3mnn 1.48 41.67 1.83 1055 108 45 42 3 3 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (145-MER) & DNA (145-MER)
189 1aoi 1.48 41.67 1.85 1097 108 45 42 3 1 a.22.1.1 PALINDROMIC 146 BP DNA REPEAT 8/9 FROM HUMAN X- CHROMOSOME ALPHA SATELLITE DNA & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
190 2va2 1.48 42.59 1.85 743 108 46 46 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
191 1ph1 1.48 44.44 1.91 712 108 48 48 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
192 3azg 1.48 41.67 1.91 1047 108 45 42 3 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
193 1ph3 1.48 43.52 1.95 712 108 47 47 0 2 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
194 1wz2 1.48 45.37 1.99 2072 108 49 49 0 1 No_SCOP_id TRNA & LEUCYL-TRNA SYNTHETASE
195 1mje 1.48 44.44 2.02 648 108 48 48 0 3 a.170.1.1;a.171.1.1;b.40.4.3 DNA & BREAST CANCER 2
196 1wbb 1.48 52.78 2.13 1577 108 57 57 0 5 a.113.1.0;c.37.1.0;c.55.6.0;d.75.2.0 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
197 3mgh 1.48 49.07 2.15 682 108 53 53 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
198 2p2r 1.44 32.91 1.33 79 108 26 26 0 3 d.51.1.1 POLY(RC)-BINDING PROTEIN 2 & C-RICH STRAND OF HUMAN TELOMERIC DNA
199 1r8d 1.44 36.11 1.44 268 108 39 39 0 2 a.6.1.3 26-MER & 26-MER & TRANSCRIPTION ACTIVATOR MTAN
200 1srs 1.44 36.11 1.45 201 108 39 39 0 2 d.88.1.1 DNA & PROTEIN (SERUM RESPONSE FACTOR (SRF))
201 3k5m 1.44 35.19 1.48 800 108 38 38 0 1 c.55.3.5;e.8.1.1 DNA POLYMERASE II & DNA & DNA
202 1nkb 1.44 37.04 1.54 607 108 40 40 0 3 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
203 1zla 1.44 37.96 1.63 1064 108 41 38 3 1 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & XENOPUS LAEVIS-LIKE HISTONE H2A & HISTONE H2B & LATENT NUCLEAR ANTIGEN
204 1tk0 1.44 36.11 1.64 818 108 39 39 0 1 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
205 1wbd 1.44 40.74 1.65 1577 108 44 44 0 2 a.113.1.0;c.37.1.0;c.55.6.0;d.75.2.0 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
206 1kog 1.44 40.74 1.74 3504 108 44 40 4 1 c.51.1.1;d.104.1.1 THREONYL-TRNA SYNTHETASE MRNA & THREONYL-TRNA SYNTHETASE
207 2gig 1.44 38.89 1.75 517 108 42 42 0 1 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINCII
208 3lz0 1.44 39.81 1.75 1041 108 43 40 3 1 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (145-MER) & DNA (145-MER)
209 1nke 1.44 37.96 1.79 603 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
210 2fj7 1.44 40.74 1.79 1052 108 44 41 3 1 a.22.1.1 147 BP DNA CONTAINING 16 BP POLY DA ELEMENT & 147 BP DNA CONTAINING 16 BP POLY DT ELEMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
211 3lja 1.44 40.74 1.79 1066 108 44 41 3 2 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 147MER DNA & 147MER DNA
212 1kix 1.44 42.59 1.81 453 108 46 46 0 1 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN ALPHA SUBUNIT
213 3dzu 1.44 43.52 1.81 705 108 47 47 0 3 No_SCOP_id RETINOIC ACID RECEPTOR RXR-ALPHA & PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA & DNA & DNA & NCOA2 PEPTIDE
214 1p3l 1.44 40.74 1.84 1053 108 44 41 3 1 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
215 1nk0 1.44 39.81 1.86 603 108 43 43 0 6 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
216 3av1 1.44 41.67 1.87 1043 108 45 42 3 1 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
217 4h5q 1.44 45.37 2.01 742 108 49 49 0 0 No_SCOP_id NUCLEOCAPSID PROTEIN & 30-MER POLY(T) DNA
218 3laj 1.44 49.07 2.13 1007 108 53 50 3 3 No_SCOP_id ARGININE REPRESSOR & DNA & DNA
219 3a01 1.39 33.33 1.42 332 108 36 36 0 5 a.4.1.1 HOMEODOMAIN-CONTAINING PROTEIN & HOMEOBOX PROTEIN ARISTALESS & DNA & DNA
220 3gqc 1.39 34.26 1.50 1839 108 37 33 4 3 No_SCOP_id DNA REPAIR PROTEIN REV1 & DNA & DNA
221 1qln 1.39 37.96 1.57 900 108 41 41 0 2 e.8.1.3 BACTERIOPHAGE T7 RNA POLYMERASE & DNA & DNA & RNA (5- R(PPP*GP*GP*G)-3)
222 1le8 1.39 37.04 1.59 167 108 40 40 0 4 a.4.1.1 DNA & MATING-TYPE PROTEIN ALPHA-2
223 1x9m 1.39 37.04 1.63 800 108 40 40 0 2 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
224 2w7o 1.39 38.89 1.63 914 108 42 41 1 2 No_SCOP_id DNA POLYMERASE KAPPA & DNA & DNA
225 1ua1 1.39 37.04 1.75 603 108 40 40 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH AMINOFLUORENE ADDUCT & DNA POLYMERASE I
226 3nbn 1.39 40.74 1.78 1422 108 44 44 0 5 No_SCOP_id RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS & NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1 & MASTERMIND-LIKE PROTEIN 1 & DNA, HES1 PROMOTER & DNA, HES1 PROMOTER
227 3tar 1.39 37.96 1.78 611 108 41 41 0 5 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
228 2it0 1.39 37.04 1.80 630 108 40 40 0 4 a.4.5.24;a.76.1.1 MBTA/MBTB OPERATOR STRAND 1 & MBTA/MBTB OPERATOR STRAND 2 & IRON-DEPENDENT REPRESSOR IDER
229 3mgq 1.39 39.81 1.80 1068 108 43 40 3 3 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (147-MER) & DNA (147-MER)
230 1s32 1.39 40.74 1.82 1071 108 44 41 3 1 a.22.1.1 PALINDROMIC ALPHA-SATELLITE 146 BP DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
231 3a6n 1.39 40.74 1.82 1046 108 44 41 3 3 a.22.1.1 HISTONE H3.1T & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
232 3utb 1.39 40.74 1.82 1049 108 44 41 3 3 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 146-MER DNA
233 3azi 1.39 41.67 1.85 1049 108 45 42 3 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
234 1pa6 1.39 44.44 1.92 712 108 48 48 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
235 1ph9 1.39 44.44 1.93 711 108 48 48 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
236 3oyd 1.39 40.74 1.95 588 108 44 44 0 2 No_SCOP_id PFV INTEGRASE & DNA & DNA
237 1an4 1.39 45.37 1.97 172 108 49 39 10 16 a.38.1.1 DNA & PROTEIN (UPSTREAM STIMULATORY FACTOR)
238 2rgr 1.39 47.22 2.04 755 108 51 51 0 3 e.11.1.1 DNA TOPOISOMERASE 2 & DNA & DNA
239 1ph8 1.39 45.37 2.06 711 108 49 49 0 2 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
240 2byt 1.39 47.22 2.08 1908 108 51 51 0 5 No_SCOP_id LEUCYL-TRNA SYNTHETASE & TRNALEU TRANSCRIPT WITH ANTICODON CAG
241 1hvo 1.37 30.43 1.20 23 108 7 7 0 0 g.40.1.1 DNA & HIV-1 NUCLEOCAPSID ZINC FINGER
242 1j75 1.37 43.75 1.92 64 108 28 28 0 1 a.4.5.19 DNA & TUMOR STROMA AND ACTIVATED MACROPHAGE PROTEIN DLM-1
243 1gdt 1.35 33.33 1.34 435 108 36 36 0 2 a.4.1.2;c.53.1.1 SITE I OF RES DNA & SITE I OF RES DNA & SITE I OF RES DNA & PROTEIN (GAMMA DELTA RESOLVASE)
244 1k6o 1.35 34.26 1.42 304 108 37 37 0 2 a.4.5.21;d.88.1.1 DNA & SERUM RESPONSE FACTOR
245 2i05 1.35 33.33 1.45 335 108 36 35 1 5 e.2.1.1 DNA REPLICATION TERMINUS SITE-BINDING PROTEIN & DNA & DNA
246 4ktq 1.35 36.11 1.50 563 108 39 39 0 2 c.55.3.5;e.8.1.1 DNA & PROTEIN (LARGE FRAGMENT OF DNA POLYMERASE I)
247 1j5k 1.35 35.80 1.56 81 108 29 29 0 2 d.51.1.1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K & DNA
248 1u8r 1.35 35.19 1.60 1902 108 38 38 0 3 a.4.5.24;a.76.1.1;b.34.1.2 MBTA OPERATOR DNA & MBTB OPERATOR DNA & IRON-DEPENDENT REPRESSOR IDER
249 1e3m 1.35 37.96 1.61 1532 108 41 41 0 3 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
250 3lz1 1.35 37.96 1.63 1041 108 41 38 3 1 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (145-MER) & DNA (145-MER)
251 1tk5 1.35 37.04 1.64 809 108 40 40 0 2 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
252 1x9s 1.35 36.11 1.64 799 108 39 39 0 2 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
253 3pw2 1.35 35.19 1.64 369 108 38 38 0 2 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
254 2vye 1.35 37.96 1.67 813 108 41 41 0 4 No_SCOP_id REPLICATIVE DNA HELICASE & DNA
255 1kx5 1.35 38.89 1.69 1268 108 42 39 3 2 a.22.1.1 DNA & HISTONE H2B.2
256 3mvd 1.35 39.81 1.73 1838 108 43 40 3 1 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (146-MER) & DNA (146-MER) & REGULATOR OF CHROMOSOME CONDENSATION
257 1njz 1.35 38.89 1.76 601 108 42 42 0 5 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
258 1l3t 1.35 38.89 1.77 602 108 42 42 0 4 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
259 2hw3 1.35 37.96 1.80 603 108 41 41 0 5 c.55.3.0;e.8.1.1 DNA & DNA POLYMERASE I
260 3azf 1.35 40.74 1.80 1045 108 44 41 3 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
261 3e3y 1.35 41.67 1.81 511 108 45 45 0 2 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA
262 3rej 1.35 40.74 1.85 1049 108 44 41 3 3 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A TYPE 1 & HISTONE H2B 1.1 & DNA (146-MER)
263 1otc 1.35 43.52 1.87 684 108 47 47 0 3 b.40.4.3 DNA & PROTEIN (TELOMERE-BINDING PROTEIN BETA SUBUNIT)
264 1rz9 1.35 41.67 1.88 1017 108 45 45 0 2 d.89.1.3 26-MER & 26-MER & REP PROTEIN
265 4dl7 1.35 40.74 1.90 445 108 44 43 1 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
266 1m18 1.35 41.67 1.93 1052 108 45 42 3 1 a.22.1.1 PALINDROMIC 146 BASE PAIR DNA FRAGMENT & HISTONE H3.2 & HISTONE H4 & HISTONE H2A.1 & HISTONE H2B.1
267 1u48 1.35 39.81 1.93 602 108 43 43 0 5 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH 8-OXOGUANINE & DNA POLYMERASE I
268 1p3k 1.35 40.74 1.94 1046 108 44 41 3 3 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
269 3gpl 1.35 45.37 1.95 1046 108 49 49 0 6 No_SCOP_id EXODEOXYRIBONUCLEASE V, SUBUNIT RECD, PUTATIVE & DNA
270 3veb 1.35 43.52 2.00 328 108 47 43 4 4 No_SCOP_id MACRODOMAIN TER PROTEIN & DNA & DNA
271 1l3u 1.35 40.74 2.01 604 108 44 44 0 6 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
272 1mfq 1.35 45.37 2.03 342 108 49 49 0 4 a.36.1.1;d.201.1.1 7S RNA OF HUMAN SRP & SIGNAL RECOGNITION PARTICLE 19KDA PROTEIN & SIGNAL RECOGNITION PARTICLE 54KDA PROTEIN
273 3mip 1.35 47.22 2.08 370 108 51 51 0 7 No_SCOP_id MSO-8G & DNA & DNA
274 4fm9 1.31 34.26 1.34 757 108 37 37 0 3 No_SCOP_id DNA TOPOISOMERASE 2-ALPHA & DNA & DNA
275 1h38 1.31 32.41 1.35 3565 108 35 35 0 3 e.8.1.3 DNA-DIRECTED RNA POLYMERASE & DNA & 5'-R(*AP*AP*CP*UP*GP*CP*GP*GP*CP*GP *AP*U)-3' & DNA
276 3v21 1.31 36.11 1.54 2486 108 39 39 0 1 c.52.1.7 ENDONUCLEASE BSE634IR & DNA
277 1f5t 1.31 35.19 1.57 566 108 38 38 0 2 a.4.5.24;a.76.1.1 43MER DNA CONTAINING DXTR CONSENSUS BINDING SEQUENCE & 43MER DNA CONTAINING DXTR CONSENSUS BINDING SEQUENCE & DIPHTHERIA TOXIN REPRESSOR
278 3oyl 1.31 36.11 1.62 584 108 39 39 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
279 1cw0 1.31 35.19 1.64 179 108 38 37 1 3 c.52.1.15 DNA & PROTEIN (DNA MISMATCH ENDONUCLEASE)
280 1ej9 1.31 36.11 1.66 527 108 39 39 0 1 d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
281 1h4s 1.31 37.04 1.67 1011 108 40 40 0 5 c.51.1.1;d.68.5.1;d.104.1.1 PROLYL-TRNA SYNTHETASE & TRNAPRO(CGG)
282 3epj 1.31 37.96 1.73 942 108 41 41 0 4 No_SCOP_id TRNA ISOPENTENYLTRANSFERASE & TRNA
283 1nk6 1.31 37.96 1.74 598 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
284 3spl 1.31 37.96 1.74 856 108 41 35 6 3 No_SCOP_id APRATAXIN-LIKE PROTEIN & DNA & DNA
285 4bdp 1.31 37.96 1.75 604 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA & PROTEIN (DNA POLYMERASE I)
286 1nk9 1.31 37.96 1.76 604 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
287 1p3o 1.31 39.81 1.76 1045 108 43 40 3 1 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
288 1t8i 1.31 38.89 1.77 607 108 42 41 1 6 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
289 2nzd 1.31 39.81 1.79 1055 108 43 40 3 3 a.22.1.1 DNA (145-MER) & DNA (145-MER) & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
290 3hm9 1.31 37.04 1.79 683 108 40 40 0 3 No_SCOP_id ARGONAUTE & DNA & 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP *G)-3'
291 2csx 1.31 40.74 1.81 1078 108 44 43 1 4 a.27.1.0;c.26.1.0 RNA (75-MER) & METHIONYL-TRNA SYNTHETASE
292 2hhu 1.31 37.96 1.82 603 108 41 41 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
293 1lbg 1.31 41.67 1.87 1512 108 45 45 0 1 a.35.1.5;c.93.1.1 DNA & PROTEIN (LACTOSE OPERON REPRESSOR)
294 2cgp 1.31 40.74 1.87 226 108 44 44 0 6 a.4.5.4;b.82.3.2 DNA & PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN)
295 3mr3 1.31 41.67 1.88 446 108 45 45 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
296 3mgs 1.31 40.74 1.92 1066 108 44 41 3 2 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (147-MER) & DNA (147-MER)
297 2fo1 1.31 44.44 1.96 815 108 48 48 0 2 a.137.14.1;b.1.18.1;b.2.5.8;b.42.7.1;d.211.1.1 DNA & LIN-12 PROTEIN
298 4gz0 1.31 45.37 2.00 1552 108 49 49 0 2 No_SCOP_id TYROSYL-DNA PHOSPHODIESTERASE 2 & DNA
299 2xo7 1.31 42.59 2.04 600 108 46 46 0 4 No_SCOP_id DNA POLYMERASE I & DNA & DNA
300 3pih 1.31 46.30 2.10 868 108 50 50 0 5 No_SCOP_id UVRABC SYSTEM PROTEIN A & DNA (32-MER)
301 1lcc 1.31 30.14 1.22 73 108 22 21 1 2 a.35.1.5 DNA & LAC REPRESSOR
302 2ld5 1.29 32.58 1.46 89 108 29 22 7 3 a.4.1.0 HOMEOBOX PROTEIN HOX-A13 & DNA & DNA
303 1wtq 1.29 37.50 1.71 80 108 30 30 0 5 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
304 2l46 1.27 44.00 2.09 25 108 11 10 1 1 No_SCOP_id C-TERMINAL ZINC KNUCLE OF THE HIV-NCP7 & DNA
305 1f44 1.27 28.70 1.27 351 108 31 31 0 1 a.60.9.1;d.163.1.1 DNA & CRE RECOMBINASE
306 4ail 1.27 33.33 1.35 765 108 36 36 0 2 No_SCOP_id DNA & DNA POLYMERASE
307 1vtl 1.27 31.48 1.42 428 108 34 34 0 4 d.129.1.0 DNA & TATA BINDING PROTEIN (TBP)
308 4db4 1.27 33.33 1.48 568 108 36 36 0 3 No_SCOP_id ATP-DEPENDENT RNA HELICASE MSS116, MITOCHONDRIAL & 5'-R(*GP*GP*GP*CP*GP*GP*G)-D(P*CP*CP*CP*GP*CP*CP*C)-3'
309 1tqe 1.27 35.19 1.54 474 108 38 38 0 5 d.88.1.1 MEF2 BINDING SITE OF NUR77 PROMOTER & MEF2 BINDING SITE OF NUR77 PROMOTER & MYOCYTE-SPECIFIC ENHANCER FACTOR 2B & HISTONE DEACETYLASE 9
310 3d6y 1.27 37.04 1.54 301 108 40 40 0 2 a.6.1.3;d.60.1.1 MULTIDRUG-EFFLUX TRANSPORTER 1 REGULATOR & BMR PROMOTER DNA
311 1l3v 1.27 36.11 1.56 611 108 39 39 0 3 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
312 1kuq 1.27 36.11 1.60 141 108 39 37 2 4 a.16.1.2 16S RIBOSOMAL RNA FRAGMENT & 30S RIBOSOMAL PROTEIN S15
313 1njx 1.27 36.11 1.60 603 108 39 39 0 3 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
314 3oyk 1.27 36.11 1.63 584 108 39 39 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
315 2j0s 1.27 37.04 1.66 673 108 40 40 0 4 c.37.1.19;d.58.7.1;d.232.1.1 ATP-DEPENDENT RNA HELICASE DDX48 & PROTEIN MAGO NASHI HOMOLOG & RNA-BINDING PROTEIN 8A & PROTEIN CASC3 & 5'-R(*UP*UP*UP*UP*UP*UP*UP*UP*UP*UP *UP*UP*UP*UP*U)-3'
316 3maq 1.27 36.11 1.68 805 108 39 39 0 2 No_SCOP_id DNA POLYMERASE II & DNA & DNA
317 1cez 1.27 37.04 1.70 894 108 40 40 0 3 e.8.1.3 DNA & PROTEIN (BACTERIOPHAGE T7 RNA POLYMERASE)
318 3spd 1.27 37.04 1.70 856 108 40 34 6 3 No_SCOP_id APRATAXIN-LIKE PROTEIN & DNA & DNA
319 4dqs 1.27 37.04 1.71 596 108 40 40 0 3 c.55.3.0;e.8.1.1 DNA POLYMERASE & DNA/RNA (5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-R(P*C)-3') & DNA
320 3l2q 1.27 37.04 1.78 564 108 40 40 0 2 No_SCOP_id INTEGRASE & DNA & DNA
321 1u47 1.27 37.96 1.79 601 108 41 41 0 5 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH 8-OXOGUANINE & DNA POLYMERASE I
322 1u49 1.27 37.96 1.79 601 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH 8-OXOGUANINE & DNA POLYMERASE I
323 3o62 1.27 37.04 1.79 1053 108 40 40 0 2 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A TYPE 1 & HISTONE H2B 1.1 & DNA (146-MER) & DNA (146-MER)
324 1u45 1.27 38.89 1.85 599 108 42 42 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH 8-OXOGUANINE & DNA POLYMERASE I
325 3jy1 1.27 40.74 1.87 245 108 44 42 2 5 a.118.1.0 ALKYLPURINE DNA GLYCOSYLASE ALKD & DNA & DNA
326 3imb 1.27 39.81 1.90 1024 108 43 43 0 5 No_SCOP_id R.BCNI & DNA & DNA
327 3jx7 1.27 41.67 1.91 255 108 45 43 2 4 a.118.1.0 ALKYLPURINE DNA GLYCOSYLASE ALKD & DNA & DNA
328 1l5u 1.27 39.81 1.95 606 108 43 43 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
329 2hhv 1.27 38.89 1.95 606 108 42 42 0 2 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
330 3t5q 1.27 44.44 1.97 1850 108 48 48 0 3 No_SCOP_id NUCLEOPROTEIN & RNA (5'-R(P*UP*UP*AP*UP*CP*UP*CP*A)-3') & RNA (5'-R(P*UP*AP*UP*CP*UP*CP*A)-3') & RNA (5'-R(P*UP*AP*UP*CP*UP*C)-3') & RNA (5'-R(P*UP*UP*AP*UP*CP*UP*CP*C)-3')
331 1c7u 1.27 42.59 2.03 188 108 46 46 0 5 d.88.1.1 MYOCYTE-SPECIFIC ENHANCER FACTOR 2A, C4 FORM & DNA
332 3c58 1.27 43.52 2.06 296 108 47 47 0 2 No_SCOP_id DNA GLYCOSYLASE & DNA & DNA
333 3v79 1.23 30.56 1.33 752 108 33 33 0 4 No_SCOP_id NEUROGENIC LOCUS NOTCH HOMOLOG PROTEIN 1 & RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS & MASTERMIND-LIKE PROTEIN 1 & DNA & DNA & RAM
334 1qnc 1.23 31.48 1.40 426 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*AP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*TP*GP*C)-3')
335 3mfh 1.23 31.48 1.40 533 108 34 34 0 1 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
336 2v1u 1.23 32.41 1.50 426 108 35 35 0 1 No_SCOP_id CELL DIVISION CONTROL PROTEIN 6 HOMOLOG & DNA & DNA
337 3ohb 1.23 32.41 1.50 537 108 35 34 1 2 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
338 1k4t 1.23 35.19 1.51 607 108 38 38 0 3 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
339 1sc7 1.23 37.04 1.56 609 108 40 40 0 5 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
340 1zyq 1.23 34.26 1.61 811 108 37 37 0 1 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
341 3oyi 1.23 36.11 1.63 584 108 39 39 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
342 1g1x 1.23 36.11 1.65 635 108 39 36 3 5 a.4.8.1;a.16.1.2;d.58.14.1 16S RIBOSOMAL RNA & 16S RIBOSOMAL RNA & 30S RIBOSOMAL PROTEIN S6 & 30S RIBOSOMAL PROTEIN S15 & 30S RIBOSOMAL PROTEIN S18
343 1cyq 1.23 34.26 1.68 366 108 37 35 2 4 d.4.1.3 DNA & INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI
344 3oyj 1.23 36.11 1.68 584 108 39 39 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
345 2h8r 1.23 36.11 1.69 392 108 39 37 2 5 No_SCOP_id HEPATOCYTE NUCLEAR FACTOR 1-BETA & DNA & DNA
346 2pzs 1.23 37.04 1.69 2324 108 40 40 0 2 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
347 3aze 1.23 37.96 1.70 1046 108 41 40 1 1 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
348 3b6g 1.23 37.96 1.70 1083 108 41 41 0 3 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 147-MER DNA & 147-MER DNA
349 1akh 1.23 37.04 1.74 169 108 40 40 0 5 a.4.1.1 DNA & PROTEIN (MATING-TYPE PROTEIN ALPHA-2)
350 3kk2 1.23 38.89 1.77 1010 108 42 42 0 2 c.55.3.0;e.8.1.2 REVERSE TRANSCRIPTASE P66 SUBUNIT & REVERSE TRANSCRIPTASE P51 SUBUNIT & DNA & DNA
351 1a73 1.23 35.19 1.78 366 108 38 36 2 4 d.4.1.3 DNA & INTRON 3 (I-PPO) ENCODED ENDONUCLEASE
352 4d8j 1.23 39.81 1.82 1339 108 43 41 2 4 No_SCOP_id MACRODOMAIN TER PROTEIN & DNA & DNA
353 1nk5 1.23 37.96 1.83 608 108 41 41 0 5 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
354 3reh 1.23 38.89 1.84 1055 108 42 39 3 4 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A TYPE 1 & HISTONE H2B 1.1 & DNA (145-MER) & DNA (145-MER)
355 2hhx 1.23 38.89 1.86 592 108 42 42 0 4 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
356 1r0a 1.23 41.67 1.89 1466 108 45 43 2 2 b.1.1.1;b.1.1.2;c.55.3.1;e.8.1.2 DNA & MONOCLONAL ANTIBODY (HEAVY CHAIN)
357 3fmt 1.23 39.81 1.91 720 108 43 43 0 3 No_SCOP_id PROTEIN SEQA & DNA & DNA
358 3rei 1.23 38.89 1.93 1055 108 42 39 3 4 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A TYPE1 & HISTONE H2B 1.1 & DNA (145-MER) & DNA (145-MER)
359 1p3f 1.23 41.67 1.94 1049 108 45 42 3 4 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
360 3tap 1.23 39.81 1.95 603 108 43 43 0 5 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
361 3v6h 1.23 42.59 1.96 734 108 46 46 0 5 No_SCOP_id DNA & DNA POLYMERASE IV
362 1rff 1.23 39.81 1.99 872 108 43 43 0 5 d.136.1.3 DNA & TOPOISOMERASE I-DERIVED PEPTIDE
363 3oyb 1.23 42.59 1.99 588 108 46 46 0 4 No_SCOP_id PFV INTEGRASE & DNA & DNA
364 3oyg 1.23 42.59 2.00 588 108 46 46 0 4 No_SCOP_id PFV INTEGRASE & DNA & DNA
365 1zho 1.23 44.44 2.06 1052 108 48 47 1 1 e.24.1.1 MRNA & 50S RIBOSOMAL PROTEIN L1
366 3e40 1.23 42.59 2.06 516 108 46 46 0 2 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA
367 2y7h 1.23 44.44 2.08 1562 108 48 47 1 3 No_SCOP_id TYPE-1 RESTRICTION ENZYME ECOKI SPECIFICITY PROTEIN & TYPE I RESTRICTION ENZYME ECOKI M PROTEIN & DNA & DNA
368 2y9h 1.23 43.52 2.08 1726 108 47 47 0 2 d.58.53.1;d.58.53.0 CSE3 & 5'-R(*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP *GP*GP*DGP*AP*UP)-3'
369 3epi 1.23 48.15 2.13 386 108 52 52 0 7 No_SCOP_id DNA POLYMERASE IOTA & DNA
370 1nk3 1.22 35.79 1.79 95 108 34 34 0 3 a.4.1.1 DNA & HOMEOBOX PROTEIN VND
371 1wd1 1.20 35.37 1.72 82 108 29 29 0 4 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
372 1qpi 1.19 27.78 1.01 225 108 30 30 0 1 a.4.1.9;a.121.1.1 DNA & PROTEIN (TETRACYCLINE REPRESSOR)
373 2vz4 1.19 27.78 1.03 121 108 30 30 0 1 a.6.1.0 HTH-TYPE TRANSCRIPTIONAL ACTIVATOR TIPA & DNA
374 1o3r 1.19 28.70 1.05 226 108 31 31 0 1 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR PROTEIN
375 2w7p 1.19 32.41 1.37 915 108 35 35 0 2 No_SCOP_id DNA POLYMERASE KAPPA & DNA & DNA
376 1qn5 1.19 31.48 1.42 425 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*GP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*CP*TP*TP*AP*TP*AP*GP*C)-3')
377 1qna 1.19 31.48 1.43 424 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*TP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*AP*AP*GP*C)-3')
378 1wne 1.19 30.56 1.45 489 108 33 33 0 4 e.8.1.4 5'-R(*CP*AP*UP*GP*GP*GP*CP*C)-3' & 5'-R(*GP*GP*CP*CP*C)-3' & RNA-DEPENDENT RNA POLYMERASE
379 2d7d 1.19 33.33 1.47 662 108 36 36 0 0 No_SCOP_id DNA & 40-MER FROM UVRABC SYSTEM PROTEIN B
380 1qn7 1.19 32.41 1.52 428 108 35 35 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*TP*AP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*AP*TP*AP*TP*AP*GP*C)-3')
381 2y9z 1.19 33.33 1.52 990 108 36 34 2 3 No_SCOP_id IMITATION SWITCH PROTEIN 1 (DEL_ATPASE) & ISWI ONE COMPLEX PROTEIN 3 & I-DNA/E-DNA
382 2r0q 1.19 34.26 1.56 892 108 37 37 0 1 No_SCOP_id PUTATIVE TRANSPOSON TN552 DNA-INVERTASE BIN3 & 31-MER & 31-MER
383 1ryr 1.19 34.26 1.66 370 108 37 37 0 2 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
384 2vod 1.19 34.26 1.67 389 108 37 37 0 2 a.4.5.46;d.58.7.1 LUPUS LA PROTEIN & 5'-R(*AP*UP*AP*UP*UP*UP*UP)-3'
385 2ihn 1.19 33.33 1.69 333 108 36 36 0 1 a.60.7.1;c.120.1.2 DNA & RIBONUCLEASE H
386 2iy5 1.19 37.96 1.69 1192 108 41 41 0 2 a.2.7.2;a.6.1.1;b.40.4.4;b.153.1.1;d.58.13.1;d.104.1.1 PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN & PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN & TRNAPHE
387 1cz0 1.19 34.26 1.70 366 108 37 35 2 4 d.4.1.3 DNA & INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI
388 2c5r 1.19 36.11 1.70 394 108 39 39 0 2 a.251.1.1 EARLY PROTEIN P16.7 & DNA & DNA
389 3c2m 1.19 35.19 1.72 357 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
390 1t8e 1.19 36.11 1.74 850 108 39 39 0 2 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
391 2ago 1.19 36.11 1.75 372 108 39 39 0 8 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
392 1h4q 1.19 37.04 1.76 994 108 40 40 0 5 c.51.1.1;d.68.5.1;d.104.1.1 PROLYL-TRNA SYNTHETASE & TRNAPRO(CGG)
393 2f8n 1.19 38.89 1.77 1048 108 42 42 0 2 a.22.1.1 ALPHA-SATELLITE DNA (146 BP) & HISTONE H3.1 & HISTONE H4 & HISTONE 3, H2BA & HISTONE H2B.1 & CORE HISTONE MACRO-H2A.1 & HISTONE H2A TYPE 1
394 3foe 1.19 37.96 1.78 1327 108 41 41 0 1 e.11.1.1;e.78.1.1 DNA TOPOISOMERASE 4 SUBUNIT A & DNA TOPOISOMERASE 4 SUBUNIT B & DNA & DNA & DNA & DNA
395 3hp6 1.19 37.04 1.78 1198 108 40 40 0 2 No_SCOP_id DNA POLYMERASE I, LARGE FRAGMENT & DNA & DNA
396 3ie1 1.19 38.89 1.80 1738 108 42 42 0 3 d.157.1.10 RIBONUCLEASE TTHA0252 & RNA (5'-R(P*UP*UP*UP*U)-3')
397 1j5o 1.19 37.96 1.81 1459 108 41 41 0 3 b.1.1.1;b.1.1.2;c.55.3.1;e.8.1.2 DNA & ANTIBODY (HEAVY CHAIN)
398 2gii 1.19 37.04 1.84 493 108 40 39 1 3 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINCII
399 3jxz 1.19 39.81 1.84 244 108 43 41 2 5 a.118.1.0 ALKYLPURINE DNA GLYCOSYLASE ALKD & DNA & DNA
400 2wb2 1.19 41.67 1.87 536 108 45 45 0 1 a.99.1.0;c.28.1.0 PHOTOLYASE & DNA & DNA
401 1l3s 1.19 39.81 1.91 603 108 43 43 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
402 1rgu 1.19 39.81 1.91 859 108 43 43 0 5 d.136.1.3 DNA & TYROSYL-DNA PHOSPHODIESTERASE 1
403 2is6 1.19 42.59 1.96 1352 108 46 46 0 2 No_SCOP_id DNA & DNA HELICASE II
404 1ixy 1.19 40.74 2.00 752 108 44 44 0 4 c.87.1.1 DNA & DNA BETA-GLUCOSYLTRANSFERASE
405 3khl 1.19 44.44 2.05 741 108 48 48 0 7 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
406 2w2h 1.19 43.52 2.12 625 108 47 47 0 4 No_SCOP_id CYCLIN-T1 & PROTEIN TAT & 5'-R(*GP*CP*UP*CP*AP*GP*AP*UP*CP*UP *GP*CP*GP*GP*UP*CP*UP*GP*AP*GP*C)-3'
407 1msw 1.19 47.22 2.16 910 108 51 51 0 6 e.8.1.3 TEMPLATE DNA & NON-TEMPATE DNA & RNA MESSAGE & DNA-DIRECTED RNA POLYMERASE
408 1wtx 1.15 37.80 1.71 82 108 31 31 0 4 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
409 1azq 1.15 36.59 1.77 82 108 30 30 0 5 b.34.13.1 DNA & PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
410 4dqy 1.15 30.56 1.28 1408 108 33 33 0 4 No_SCOP_id POLY [ADP-RIBOSE] POLYMERASE 1 & POLY [ADP-RIBOSE] POLYMERASE 1 & POLY [ADP-RIBOSE] POLYMERASE 1 & DNA (26-MER)
411 1r49 1.15 31.48 1.30 592 108 34 34 0 3 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
412 1qn4 1.15 31.48 1.40 426 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*TP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*AP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3')
413 1qnb 1.15 31.48 1.41 426 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*TP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*AP*TP*TP*TP*AP*TP*AP*GP*C)-3')
414 1qn8 1.15 31.48 1.42 426 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*TP*AP*AP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*AP*AP*TP*AP*GP*C)-3')
415 1qn9 1.15 31.48 1.42 425 108 34 34 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*CP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*GP*TP*AP*GP*C)-3')
416 1qn6 1.15 32.41 1.52 427 108 35 35 0 4 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*TP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*AP*TP*TP*AP*TP*AP*GP*C)-3')
417 1p71 1.15 35.19 1.57 226 108 38 38 0 3 a.55.1.1 DNA & DNA-BINDING PROTEIN HU
418 1qai 1.15 32.41 1.57 518 108 35 35 0 3 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
419 1nvp 1.15 32.41 1.58 401 108 35 35 0 3 a.32.1.1;b.56.1.1;d.129.1.1 DNA & TRANSCRIPTION INITIATION FACTOR IIA GAMMA CHAIN
420 1p7d 1.15 33.33 1.60 636 108 36 36 0 2 d.163.1.1 DNA & INTEGRASE
421 2fqz 1.15 35.19 1.61 1203 108 38 37 1 1 No_SCOP_id DNA STRAND 1 & DNA STRAND 2 & R.ECL18KI
422 4e0d 1.15 36.11 1.64 597 108 39 39 0 2 No_SCOP_id DNA POLYMERASE & DNA & DNA
423 2nqj 1.15 33.33 1.65 587 108 36 36 0 4 c.1.15.1 DNA & ENDONUCLEASE 4
424 2v4q 1.15 35.19 1.66 371 108 38 38 0 2 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
425 3klh 1.15 36.11 1.72 1465 108 39 38 1 3 No_SCOP_id REVERSE TRANSCRIPTASE/RIBONUCLEASE H & P51 RT & MONOCLONAL ANTIBODY, HEAVY CHAIN & MONOCLONAL ANTIBODY, LIGHT CHAIN & DNA & DNA
426 3taq 1.15 37.04 1.76 604 108 40 40 0 3 c.55.3.0;e.8.1.1 DNA POLYMERASE I & DNA & DNA
427 1z1g 1.15 36.11 1.78 1558 108 39 37 2 2 d.10.1.4;d.163.1.1 29-MER & 29-MER & 29-MER & 29-MER & DNA & 25-MER & INTEGRASE
428 2hht 1.15 37.96 1.82 605 108 41 41 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
429 1nk7 1.15 37.96 1.87 600 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
430 1h9t 1.15 39.81 1.89 496 108 43 43 0 6 a.4.5.6;a.78.1.1 FATTY ACID METABOLISM REGULATOR PROTEIN & DNA & DNA
431 1efa 1.15 40.74 1.91 978 108 44 44 0 2 a.35.1.5;c.93.1.1 DNA & LAC REPRESSOR
432 1zrf 1.15 37.96 1.91 476 108 41 41 0 0 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR
433 2o61 1.15 38.89 1.91 882 108 42 42 0 2 b.1.18.1;b.2.5.3 36-MER & 34-MER & TRANSCRIPTION FACTOR P65/INTERFERON REGULATORY FACTOR 7/INTERFERON REGULATORY FACTOR 3 FUSION PROTEIN & NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT
434 3kk3 1.15 38.89 1.91 1002 108 42 42 0 1 c.55.3.0;e.8.1.2 REVERSE TRANSCRIPTASE P66 SUBUNIT & REVERSE TRANSCRIPTASE P51 SUBUNIT & DNA & DNA
435 1jh9 1.15 40.74 1.95 356 108 44 44 0 3 a.35.1.5;c.93.1.1 DNA & PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
436 3hsb 1.15 41.67 1.95 411 108 45 45 0 3 b.38.1.0 PROTEIN HFQ & RNA (5'-R(*AP*GP*AP*GP*AP*GP*A)-3')
437 3eyz 1.15 37.96 1.96 603 108 41 41 0 5 c.55.3.5;e.8.1.1 DNA POLYMERASE I & DNA & DNA
438 1rgt 1.15 40.74 1.98 859 108 44 44 0 5 d.136.1.3 DNA & TYROSYL-DNA PHOSPHODIESTERASE 1
439 1y6g 1.15 41.67 1.98 809 108 45 45 0 4 No_SCOP_id DNA & DNA ALPHA-GLUCOSYLTRANSFERASE
440 3oyc 1.15 42.59 1.98 588 108 46 46 0 4 No_SCOP_id PFV INTEGRASE & DNA & DNA
441 3htx 1.15 41.67 2.00 1662 108 45 45 0 4 No_SCOP_id HEN1 & 5'- R(*GP*AP*UP*UP*UP*CP*UP*CP*UP*CP*UP*GP*CP*AP*AP*GP*CP*GP*AP *AP*AP*G)-3' & 5'- R(P*UP*UP*CP*GP*CP*UP*UP*GP*CP*AP*GP*AP*GP*AP*GP*AP*AP*AP*U P*CP*AP*C)-3'
442 2is1 1.15 43.52 2.01 1324 108 47 46 1 4 No_SCOP_id DNA & DNA HELICASE II
443 3oyf 1.15 40.74 2.01 588 108 44 44 0 2 No_SCOP_id PFV INTEGRASE & DNA & DNA
444 1efw 1.15 43.52 2.05 1286 108 47 44 3 0 b.40.4.1;d.74.4.1;d.104.1.1 ASPARTYL-TRNA & ASPARTYL-TRNA SYNTHETASE
445 1t3n 1.15 49.07 2.15 802 108 53 53 0 3 d.240.1.1;e.8.1.7 TEMPLATE DNA STRAND & PRIMER DNA STRAND & POLYMERASE (DNA DIRECTED) IOTA
446 2glo 1.11 32.53 1.39 83 108 27 27 0 1 No_SCOP_id BRINKER CG9653-PA & DNA & DNA
447 2fl3 1.11 27.78 1.13 267 108 30 29 1 2 No_SCOP_id DNA & R.HINP1I RESTRICTION ENDONUCLEASE
448 3add 1.11 27.78 1.18 658 108 30 30 0 2 No_SCOP_id L-SERYL-TRNA(SEC) KINASE & SELENOCYSTEINE TRNA
449 3t5n 1.11 29.63 1.30 288 108 32 32 0 3 No_SCOP_id NUCLEOPROTEIN & RNA (5'-R(P*UP*AP*UP*CP*UP*C)-3')
450 1uut 1.11 29.63 1.34 420 108 32 32 0 1 d.89.1.3 REP PROTEIN & DNA
451 3mfi 1.11 33.33 1.48 533 108 36 33 3 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
452 3n7q 1.11 32.41 1.49 322 108 35 35 0 2 No_SCOP_id TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL & DNA & DNA
453 3kov 1.11 32.41 1.51 412 108 35 35 0 5 d.88.1.1 MYOCYTE-SPECIFIC ENHANCER FACTOR 2A & DNA & DNA
454 3lsp 1.11 32.41 1.58 240 108 35 35 0 2 No_SCOP_id DEST & DNA & DNA
455 2pi5 1.11 35.19 1.60 894 108 38 38 0 3 e.8.1.3 DNA & DNA-DIRECTED RNA POLYMERASE
456 3nm9 1.11 35.19 1.65 539 108 38 37 1 0 a.21.1.1 HIGH MOBILITY GROUP PROTEIN D & DNA
457 4fo6 1.11 34.26 1.67 346 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA & DNA & DNA
458 2voa 1.11 33.33 1.68 532 108 36 36 0 4 d.151.1.0 EXODEOXYRIBONUCLEASE III & DNA & DNA
459 1s76 1.11 35.19 1.71 876 108 38 38 0 2 e.8.1.3 DNA & DNA-DIRECTED RNA POLYMERASE
460 7icj 1.11 35.19 1.74 339 108 38 38 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
461 2pxi 1.11 36.11 1.75 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
462 2isp 1.11 36.11 1.76 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & POLYMERASE (DNA DIRECTED), BETA
463 3jpo 1.11 36.11 1.76 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
464 3jpq 1.11 36.11 1.76 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
465 3jyt 1.11 37.96 1.76 1009 108 41 41 0 2 No_SCOP_id HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT & HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT & DNA & DNA
466 3mby 1.11 36.11 1.76 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
467 3rjh 1.11 36.11 1.76 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
468 2fmp 1.11 36.11 1.77 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
469 3rjf 1.11 36.11 1.77 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
470 2f5s 1.11 36.11 1.80 295 108 39 39 0 3 a.156.1.2;b.113.1.1;g.39.1.8 DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSIDASE
471 1wet 1.11 38.89 1.82 355 108 42 42 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
472 1zre 1.11 35.19 1.83 476 108 38 38 0 0 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR
473 1kc6 1.11 39.81 1.84 1013 108 43 43 0 2 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINCII
474 2j6u 1.11 36.11 1.85 374 108 39 39 0 2 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
475 1rys 1.11 37.04 1.86 743 108 40 40 0 5 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
476 1zgw 1.11 38.89 1.86 174 108 42 42 0 1 No_SCOP_id ADA POLYPROTEIN & DNA & DNA
477 3lsr 1.11 37.04 1.86 219 108 40 40 0 3 No_SCOP_id DEST & DNA (27-MER)
478 3a46 1.11 38.89 1.87 626 108 42 42 0 2 No_SCOP_id FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE & DNA & DNA
479 1rr8 1.11 37.04 1.89 537 108 40 40 0 3 d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
480 3khh 1.11 37.96 1.89 739 108 41 41 0 6 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
481 1fiu 1.11 37.96 1.90 1188 108 41 39 2 0 c.52.1.10 DNA & TYPE II RESTRICTION ENZYME NGOMI
482 3e41 1.11 38.89 1.90 517 108 42 42 0 1 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA
483 3mis 1.11 42.59 2.01 370 108 46 46 0 3 No_SCOP_id MSO-8G & DNA & DNA
484 2bsq 1.11 41.67 2.03 898 108 45 42 3 3 a.43.1.8;c.120.1.1 TRAFFICKING PROTEIN A & TRAFFICKING PROTEIN B & IR36, FORWARD STRAND & IR36, REVERSE STRAND
485 2h1o 1.11 41.67 2.03 898 108 45 42 3 3 a.43.1.8;c.120.1.1 IR36-STRAND 1 & IR36-STRAND 2 & TRAFFICKING PROTEIN B & TRAFFICKING PROTEIN A
486 3l8b 1.11 44.44 2.07 1848 108 48 47 1 4 c.55.3.5;e.8.1.1 DNA POLYMERASE & DNA & DNA
487 2zm5 1.11 44.44 2.08 740 108 48 48 0 1 No_SCOP_id TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE & TRNA(PHE)
488 1wtw 1.09 37.80 1.83 82 108 31 31 0 7 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
489 1hrz 1.09 33.71 1.57 89 108 30 30 0 1 a.21.1.1 DNA & HUMAN SRY
490 1jj6 1.08 31.08 1.53 74 108 23 23 0 2 a.4.1.2 DNA & DNA-INVERTASE HIN
491 2bzf 1.08 32.35 1.67 102 108 33 32 1 5 a.60.5.1 BARRIER-TO-AUTOINTEGRATION FACTOR & DNA & DNA
492 1o3s 1.07 27.78 0.97 226 108 30 30 0 1 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR PROTEIN
493 1qf6 1.07 32.41 1.47 710 108 35 31 4 2 c.51.1.1;d.15.10.1;d.67.1.1;d.104.1.1 THREONINE TRNA & THREONYL-TRNA SYNTHETASE
494 1qne 1.07 32.41 1.57 431 108 35 35 0 3 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3')
495 1vto 1.07 32.41 1.57 431 108 35 35 0 3 d.129.1.0 TATA BINDING PROTEIN & DNA & DNA
496 3e45 1.07 34.26 1.63 523 108 37 37 0 3 c.52.1.19 TYPE-2 RESTRICTION ENZYME HINDII & DNA
497 1y8z 1.07 34.26 1.65 781 108 37 37 0 2 No_SCOP_id DNA & DNA ALPHA-GLUCOSYLTRANSFERASE
498 1qu2 1.07 36.11 1.66 992 108 39 39 0 3 a.27.1.1;b.51.1.1;c.26.1.1 ISOLEUCYL-TRNA & ISOLEUCYL-TRNA SYNTHETASE
499 1lb2 1.07 34.26 1.67 383 108 37 37 0 5 a.4.5.4;a.60.3.1;b.82.3.2 DNA & DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN
500 2c2d 1.07 34.26 1.69 368 108 37 37 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
501 1k8g 1.07 35.19 1.70 830 108 38 38 0 0 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN ALPHA SUBUNIT
502 8ico 1.07 33.33 1.70 341 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
503 1huo 1.07 35.19 1.71 680 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
504 3gdx 1.07 35.19 1.72 357 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
505 3k0j 1.07 37.04 1.72 526 108 40 40 0 0 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (87-MER)
506 3jpp 1.07 36.11 1.74 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
507 3jps 1.07 36.11 1.74 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
508 2iso 1.07 36.11 1.75 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & POLYMERASE (DNA DIRECTED), BETA
509 3jpt 1.07 36.11 1.75 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
510 3rjk 1.07 36.11 1.75 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
511 3jpn 1.07 36.11 1.76 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
512 3jpr 1.07 36.11 1.76 356 108 39 39 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
513 3kyl 1.07 37.04 1.76 620 108 40 40 0 1 No_SCOP_id TELOMERASE REVERSE TRANSCRIPTASE & DNA/RNA (5'-R(*CP*UP*GP*AP*CP*CP*UP*GP*AP*C)- D(P*TP*TP*CP*GP*GP*TP*CP*AP*GP*GP*TP*CP*AP*G)-3')
514 2bpf 1.07 35.19 1.77 339 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
515 2qby 1.07 36.11 1.77 800 108 39 36 3 5 No_SCOP_id CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 1 & CELL DIVISION CONTROL PROTEIN 6 HOMOLOG 3 & DNA (33-MER) & DNA (33-MER)
516 1bpy 1.07 36.11 1.78 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA)
517 3e00 1.07 35.19 1.78 711 108 38 38 0 4 No_SCOP_id RETINOIC ACID RECEPTOR RXR-ALPHA & PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA & DNA & DNA & NCOA2 PEPTIDE
518 1p3m 1.07 38.89 1.81 1045 108 42 42 0 2 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
519 3gil 1.07 37.04 1.81 738 108 40 40 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
520 1ddn 1.07 36.11 1.84 538 108 39 39 0 2 a.4.5.24;a.76.1.1 33 BASE DNA CONTAINING TOXIN OPERATOR & 33 BASE DNA CONTAINING TOXIN OPERATOR & DIPHTHERIA TOX REPRESSOR
521 3jsm 1.07 37.96 1.85 1009 108 41 41 0 2 No_SCOP_id HIV-1 REVERSE TRANSCRIPTASE P66 SUBUNIT & HIV-1 REVERSE TRANSCRIPTASE P51 SUBUNIT & DNA & DNA
522 3gii 1.07 37.04 1.87 371 108 40 40 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
523 4b3g 1.07 37.96 1.87 1239 108 41 41 0 1 No_SCOP_id DNA-BINDING PROTEIN SMUBP-2 & RNA (5'-(AP*AP*AP*AP*AP*AP*AP*AP*AP)-3')
524 1jxl 1.07 37.04 1.88 366 108 40 40 0 5 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV (FAMILY Y)
525 2bdp 1.07 37.96 1.88 599 108 41 41 0 4 c.55.3.5;e.8.1.1 DNA & PROTEIN (DNA POLYMERASE I)
526 3hjf 1.07 39.81 1.88 695 108 43 43 0 2 No_SCOP_id ARGONAUTE & DNA & 5'-R(*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*G)-3'
527 3rbe 1.07 37.04 1.90 730 108 40 40 0 6 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
528 1seu 1.07 39.81 1.91 607 108 43 43 0 3 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
529 2vhg 1.07 38.89 1.91 300 108 42 42 0 3 d.58.57.1 TRANSPOSASE ORFA & RIGHT END 31-MER
530 2is4 1.07 40.74 1.92 1328 108 44 44 0 3 No_SCOP_id 25-MER & DNA HELICASE II
531 3s3m 1.07 40.74 1.93 588 108 44 44 0 4 No_SCOP_id PFV INTEGRASE & DNA & DNA
532 2dr7 1.07 39.81 1.96 470 108 43 43 0 3 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (33-MER) & CCA-ADDING ENZYME
533 3t5j 1.07 37.96 1.96 370 108 41 41 0 6 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
534 2v9w 1.07 43.52 2.02 743 108 47 47 0 6 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
535 2w9c 1.07 43.52 2.02 736 108 47 47 0 8 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA POLYMERASE IV & DNA & DNA
536 3oqn 1.07 44.44 2.09 868 108 48 43 5 8 No_SCOP_id CATABOLITE CONTROL PROTEIN A & PHOSPHOCARRIER PROTEIN HPR & DNA & DNA
537 3khr 1.07 44.44 2.11 741 108 48 48 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
538 1m5x 1.07 42.59 2.12 370 108 46 46 0 4 d.95.2.1 DNA & DNA ENDONUCLEASE I-MSOI
539 2ezv 1.07 45.37 2.17 566 108 49 49 0 3 No_SCOP_id DNA & TYPE II RESTRICTION ENZYME SFII
540 1zq3 1.06 38.30 1.87 94 108 36 36 0 2 a.4.1.1 HOMEOTIC BICOID PROTEIN & DNA & DNA
541 3fdq 1.02 27.78 1.17 310 108 30 30 0 0 No_SCOP_id MOTILITY GENE REPRESSOR MOGR & DNA & DNA
542 2z3x 1.02 28.70 1.22 190 108 31 31 0 1 No_SCOP_id SMALL, ACID-SOLUBLE SPORE PROTEIN C & DNA & DNA
543 1p51 1.02 30.56 1.46 444 108 33 32 1 4 a.55.1.1 DNA & DNA-BINDING PROTEIN HU
544 1k61 1.02 30.56 1.49 274 108 33 33 0 4 a.4.1.1 DNA & MATING-TYPE PROTEIN ALPHA-2
545 3t79 1.02 31.48 1.53 835 108 34 34 0 1 No_SCOP_id DNA & KLLA0E03807P
546 4e7a 1.02 33.33 1.56 544 108 36 36 0 6 No_SCOP_id 5'-R(*CP*AP*UP*GP*GP*C)-D(P*(DOC))-3' & RNA-DIRECTED RNA POLYMERASE
547 1n5y 1.02 34.26 1.57 1462 108 37 37 0 3 b.1.1.1;b.1.1.2;c.55.3.1;e.8.1.2 DNA & MONOCLONAL ANTIBODY (HEAVY CHAIN)
548 8icf 1.02 32.41 1.58 341 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
549 2fdc 1.02 34.26 1.61 1107 108 37 37 0 1 c.37.1.19 DNA & UVRABC SYSTEM PROTEIN B
550 7ich 1.02 32.41 1.61 339 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
551 4eey 1.02 34.26 1.64 446 108 37 36 1 2 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
552 1cma 1.02 33.33 1.65 227 108 36 35 1 4 a.43.1.5 DNA & PROTEIN (MET REPRESSOR)
553 3pvp 1.02 33.33 1.65 243 108 36 35 1 1 No_SCOP_id CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA & DNA & DNA
554 1s77 1.02 34.26 1.67 875 108 37 37 0 2 e.8.1.3 DNA & DNA-DIRECTED RNA POLYMERASE
555 1z1b 1.02 32.41 1.67 805 108 35 35 0 3 d.10.1.4;d.163.1.1 DNA & INTEGRASE
556 3isd 1.02 34.26 1.69 356 108 37 37 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
557 2bs1 1.02 34.26 1.71 410 108 37 37 0 1 d.85.1.1 MS2 COAT PROTEIN & 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'
558 2bpg 1.02 35.19 1.72 678 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA
559 1ca5 1.02 35.80 1.73 81 108 29 29 0 4 b.34.13.1 DNA & CHROMOSOMAL PROTEIN SAC7D
560 1mjp 1.02 34.26 1.73 227 108 37 36 1 3 a.43.1.5 CONSENSUS OPERATOR DUPLEX & CONSENSUS OPERATOR DUPLEX & METHIONINE REPRESSOR
561 3rb3 1.02 34.26 1.73 371 108 37 37 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
562 2bcv 1.02 34.26 1.74 344 108 37 37 0 2 a.60.6.0;a.60.12.0;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
563 2fmq 1.02 36.11 1.75 357 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
564 8ica 1.02 34.26 1.75 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
565 2fms 1.02 36.11 1.76 357 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
566 3c2k 1.02 36.11 1.76 357 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
567 9ick 1.02 34.26 1.76 339 108 37 37 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
568 3khg 1.02 34.26 1.78 731 108 37 37 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
569 1rv5 1.02 34.26 1.79 489 108 37 37 0 2 c.52.1.2 DNA & ECORV ENDONUCLEASE
570 3azj 1.02 37.96 1.80 1032 108 41 37 4 3 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
571 3er8 1.02 35.19 1.80 1480 108 38 38 0 3 c.66.1.25;e.69.1.1 CAP-SPECIFIC MRNA (NUCLEOSIDE-2'-O-)-METHYLTRANSFERASE & POLY(A) POLYMERASE CATALYTIC SUBUNIT & RNA/DNA CHIMERA 5'-D(CP*CP*)R(UP*UP*)D(C)-3' & RNA/DNA CHIMERA 5'-R(P*UP*UP*)D(C)-3' & RNA/DNA CHIMERA 5'-D(P*CP*)R(UP*U)-3'
572 8icj 1.02 35.19 1.80 341 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
573 1njy 1.02 36.11 1.81 604 108 39 39 0 3 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND & DNA POLYMERASE I
574 3uvf 1.02 37.04 1.82 622 108 40 38 2 3 No_SCOP_id INTRON-ENCODED DNA ENDONUCLEASE I-HJEMI & SYNTHETIC OLIGO & SYNTHETIC OLIGO
575 9icf 1.02 35.19 1.83 342 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
576 2pue 1.02 38.89 1.84 355 108 42 42 0 3 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR )
577 2hhs 1.02 37.04 1.85 606 108 40 40 0 3 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
578 2va3 1.02 36.11 1.85 370 108 39 39 0 7 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
579 2nll 1.02 37.04 1.86 204 108 40 40 0 4 g.39.1.2 DNA & PROTEIN (THYROID HORMONE RECEPTOR)
580 3m4a 1.02 37.96 1.86 328 108 41 41 0 1 No_SCOP_id PUTATIVE TYPE I TOPOISOMERASE & DNA & DNA
581 3s3o 1.02 37.04 1.88 588 108 40 40 0 5 No_SCOP_id PFV INTEGRASE & DNA & DNA
582 2v4r 1.02 37.96 1.91 371 108 41 41 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
583 2c2e 1.02 37.04 1.92 369 108 40 40 0 7 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
584 3t5l 1.02 37.96 1.96 371 108 41 41 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
585 3f8i 1.02 39.81 1.97 458 108 43 43 0 2 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
586 2flc 1.02 41.67 2.00 267 108 45 40 5 5 No_SCOP_id DNA & R.HINP1I RESTRICTION ENDONUCLEASE
587 1zzi 1.02 41.67 2.01 172 108 45 45 0 2 d.51.1.0 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K
588 3eph 1.02 39.81 2.04 942 108 43 43 0 4 No_SCOP_id TRNA ISOPENTENYLTRANSFERASE & TRNA
589 2gxa 1.02 44.44 2.07 3264 108 48 48 0 5 No_SCOP_id DNA & REPLICATION PROTEIN E1
590 3c5f 1.02 43.52 2.08 694 108 47 47 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
591 2lkx 1.02 35.11 1.74 94 108 33 33 0 3 a.4.1.1 PITUITARY HOMEOBOX 3 & DNA & DNA
592 1wtv 1.01 36.25 1.69 80 108 29 29 0 3 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
593 1hry 0.99 33.71 1.68 89 108 30 30 0 3 a.21.1.1 DNA & HUMAN SRY
594 4gzn 0.99 27.85 1.16 79 108 22 21 1 0 No_SCOP_id DNA & ZINC FINGER PROTEIN 57
595 1b72 0.98 30.56 1.41 181 108 33 33 0 1 a.4.1.1 DNA & PROTEIN (PBX1)
596 3jsp 0.98 28.70 1.43 430 108 31 31 0 0 a.4.5.0;b.87.1.1 LEXA REPRESSOR & DNA
597 1b8i 0.98 29.63 1.44 150 108 32 32 0 2 a.4.1.1 DNA & PROTEIN (HOMEOBOX PROTEIN EXTRADENTICLE)
598 2zhg 0.98 31.48 1.45 141 108 34 34 0 1 a.6.1.0 REDOX-SENSITIVE TRANSCRIPTIONAL ACTIVATOR SOXR & DNA
599 9ant 0.98 31.48 1.54 172 108 34 34 0 2 a.4.1.1 DNA & ANTENNAPEDIA HOMEODOMAIN
600 1bpx 0.98 32.41 1.60 362 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA)
601 1mtl 0.98 31.48 1.60 339 108 34 34 0 2 c.18.1.2 DNA & G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE
602 1nk2 0.98 32.41 1.62 109 108 35 35 0 2 a.4.1.1 DNA & HOMEOBOX PROTEIN VND
603 2uvr 0.98 33.33 1.63 371 108 36 36 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
604 1ytb 0.98 31.48 1.64 418 108 34 34 0 5 d.129.1.1 DNA (29MER) & PROTEIN (TATA BINDING PROTEIN (TBP))
605 2dvi 0.98 33.33 1.64 465 108 36 36 0 2 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (34-MER) & CCA-ADDING ENZYME
606 3oha 0.98 33.33 1.64 538 108 36 32 4 2 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
607 9ico 0.98 32.41 1.64 339 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
608 8ice 0.98 33.33 1.67 341 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
609 1tva 0.98 33.33 1.69 363 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
610 1zme 0.98 35.19 1.69 172 108 38 37 1 3 g.38.1.1;h.1.3.1 DNA & PROLINE UTILIZATION TRANSCRIPTION ACTIVATOR
611 1zqe 0.98 33.33 1.69 341 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
612 8ics 0.98 32.41 1.69 341 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
613 3uq2 0.98 34.26 1.70 340 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
614 4aij 0.98 34.26 1.70 323 108 37 37 0 4 No_SCOP_id TRANSCRIPTIONAL REGULATOR SLYA & ROVA PROMOTER FRAGMENT, 5'-D(*AP*AP*TP*TP*AP*TP*AP*TP *TP*AP*TP*TP*TP*GP*AP*AP*TP*TP*AP*AP*T)-3' & ROVA PROMOTER FRAGMENT, 5'-D(*TP*AP*TP*TP*AP*AP*TP*TP *CP*AP*AP*AP*TP*AP*AP*TP*AP*TP*AP*AP*T)-3'
615 1mq3 0.98 35.19 1.71 355 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
616 7icv 0.98 33.33 1.72 339 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
617 2pfn 0.98 34.26 1.73 346 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 TEMPLATE & PRIMER & DOWNSTREAM PRIMER & DNA POLYMERASE LAMBDA
618 8ich 0.98 33.33 1.73 341 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
619 9icc 0.98 34.26 1.75 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
620 1huz 0.98 36.11 1.76 682 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
621 3mdc 0.98 35.19 1.77 333 108 38 38 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
622 7ici 0.98 34.26 1.77 339 108 37 37 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
623 8icl 0.98 34.26 1.79 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
624 2noe 0.98 33.33 1.81 339 108 36 36 0 2 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
625 3rax 0.98 35.19 1.81 739 108 38 38 0 8 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
626 2fjx 0.98 34.26 1.82 271 108 37 37 0 3 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
627 2oq4 0.98 37.96 1.83 543 108 41 41 0 4 a.156.1.2;b.113.1.1;g.39.1.8 ENDONUCLEASE VIII & DNA & DNA
628 2uvv 0.98 35.19 1.83 370 108 38 38 0 3 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
629 2c22 0.98 37.04 1.87 370 108 40 40 0 6 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
630 2np2 0.98 36.11 1.88 274 108 39 39 0 2 a.55.1.0 36-MER & HBB
631 3m9m 0.98 36.11 1.89 368 108 39 39 0 3 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
632 3t5h 0.98 37.04 1.89 370 108 40 40 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
633 1xsn 0.98 35.19 1.90 344 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
634 1p34 0.98 37.96 1.92 1050 108 41 37 4 3 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
635 1q9x 0.98 38.89 1.92 3736 108 42 42 0 2 c.55.3.5;e.8.1.1 5'-GCGGACTGCTTAC(DIDEOXYCYTIDINE)-3' & 5'-AC(TETRAHYDROFURAN)GGTAAGCAGTCCGCGG-3' & DNA POLYMERASE
636 3t5k 0.98 36.11 1.92 371 108 39 39 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
637 3m9o 0.98 36.11 1.93 372 108 39 39 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
638 1xc9 0.98 37.04 1.94 602 108 40 40 0 4 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH BENZO[A]PYRENE ADDUCT & DNA POLYMERASE I
639 3mgp 0.98 37.96 1.94 1067 108 41 38 3 4 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (147-MER) & DNA (147-MER)
640 1zjw 0.98 37.04 1.96 603 108 40 40 0 3 b.53.1.2;c.26.1.1 GLUTAMINYL-TRNA & GLUTAMINYL-TRNA SYNTHETASE
641 2pug 0.98 39.81 1.96 355 108 43 43 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
642 3auo 0.98 39.81 1.96 1200 108 43 43 0 2 No_SCOP_id DNA POLYMERASE BETA FAMILY (X FAMILY) & 1-NT GAPPED DNA
643 1vpw 0.98 40.74 1.98 355 108 44 44 0 3 a.35.1.5;c.93.1.1 DNA & PURINE REPRESSOR
644 4fcy 0.98 39.81 1.98 1049 108 43 41 2 2 No_SCOP_id TRANSPOSASE & DNA (68-MER) & DNA (13-MER) & DNA (49-MER)
645 1lpq 0.98 40.74 2.01 600 108 44 42 2 4 a.2.8.1;d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
646 3twm 0.98 38.89 2.02 582 108 42 42 0 3 No_SCOP_id FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE 1 & DNA & DNA
647 2agp 0.98 38.89 2.06 740 108 42 42 0 3 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
648 3iay 0.98 41.67 2.07 912 108 45 45 0 1 No_SCOP_id DNA & DNA POLYMERASE DELTA CATALYTIC SUBUNIT
649 1gcc 0.98 31.76 1.64 85 108 27 27 0 4 d.10.1.2 DNA & ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
650 1e7j 0.96 32.00 1.54 100 108 32 32 0 3 a.21.1.1 HIGH MOBILITY GROUP PROTEIN D & DNA (5'-D(*CP*GP*AP*TP*AP*TP*TP*AP*AP*GP*AP*GP*CP*C)-3') & DNA (5'-D(*GP*GP*CP*TP*CP*AP*AP*TP*AP*TP*CP*G)-3')
651 3k58 0.94 25.93 0.96 809 108 28 28 0 1 No_SCOP_id DNA POLYMERASE II & DNA & DNA
652 1tro 0.94 25.93 1.03 477 108 28 28 0 1 a.4.12.1 DNA & PROTEIN (TRP REPRESSOR)
653 3c1b 0.94 28.70 1.37 1053 108 31 30 1 3 a.22.1.1 HISTONE H3-LIKE & HISTONE H4 & HISTONE H2A TYPE 1 & HISTONE 2, H2BF & PALINDROMIC 146BP HUMAN ALPHA SATELLITE DNA
654 3g3c 0.94 28.70 1.38 525 108 31 31 0 4 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
655 3ut9 0.94 28.70 1.42 1052 108 31 30 1 3 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 145-MER DNA & 145-MER DNA
656 3ugp 0.94 29.63 1.47 194 108 32 32 0 2 No_SCOP_id RNA POLYMERASE SIGMA FACTOR & DNA
657 1ihf 0.94 30.56 1.60 260 108 33 32 1 2 a.55.1.1 DNA (35-MER) & DNA & DNA & PROTEIN (INTEGRATION HOST FACTOR (ALPHA) (IHF)) & PROTEIN (INTEGRATION HOST FACTOR (BETA) (IHF))
658 2q2t 0.94 31.48 1.63 334 108 34 34 0 2 b.40.4.6;d.142.2.1 DNA & CHLORELLA VIRUS DNA LIGASE
659 3tq1 0.94 34.26 1.64 442 108 37 37 0 3 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
660 2iz8 0.94 34.26 1.68 416 108 37 37 0 2 d.85.1.1 MS2 COAT PROTEIN & RNA, (5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*CP*UP*CP* AP*CP*CP*CP*AP*UP*GP*U)-3')
661 2bcu 0.94 34.26 1.71 349 108 37 37 0 3 a.60.6.0;a.60.12.0;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
662 1egw 0.94 35.19 1.72 354 108 38 38 0 3 d.88.1.1 DNA & MADS BOX TRANSCRIPTION ENHANCER FACTOR 2, POLYPEPTIDE A
663 8icw 0.94 34.26 1.72 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
664 3rjj 0.94 33.33 1.73 356 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
665 1zjm 0.94 33.33 1.74 354 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 D(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C )-3' & DNA & DNA & DNA POLYMERASE BETA
666 3mgi 0.94 35.19 1.76 340 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
667 1u35 0.94 34.26 1.77 1049 108 37 36 1 2 a.22.1.1 ALPHA-SATELLITE DNA & HISTONE H3.1 & HIST1H4I PROTEIN & H2A HISTONE FAMILY & HISTONE 3, H2BA
668 3rji 0.94 36.11 1.77 356 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
669 3kwq 0.94 37.96 1.79 1049 108 41 38 3 4 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (146-MER)
670 3m9e 0.94 35.19 1.80 487 108 38 38 0 2 No_SCOP_id THYROID HORMONE RECEPTOR BETA & DNA
671 1oh7 0.94 35.19 1.81 1577 108 38 38 0 3 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
672 1kln 0.94 36.11 1.82 618 108 39 39 0 2 c.55.3.5;e.8.1.1 DNA & PROTEIN (DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7))
673 3gut 0.94 36.11 1.82 2444 108 39 36 3 3 No_SCOP_id TRANSCRIPTION FACTOR P65 & NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT & HIV-LTR CORE FORWARD STRAND & HIV-LTR CORE REVERSE STRAND
674 8icp 0.94 34.26 1.82 342 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
675 9ici 0.94 34.26 1.82 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
676 3gim 0.94 36.11 1.83 370 108 39 39 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
677 9icj 0.94 34.26 1.83 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
678 4ghl 0.94 37.04 1.84 534 108 40 40 0 1 No_SCOP_id SHORT PALINDROMIC RNA AGACAGCAUAUGCUGUCU & POLYMERASE COFACTOR VP35
679 9icy 0.94 34.26 1.84 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
680 3ayw 0.94 37.96 1.85 1046 108 41 37 4 3 a.22.1.1 HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
681 3ho1 0.94 36.11 1.85 698 108 39 39 0 3 No_SCOP_id ARGONAUTE & DNA & 5'-R(P*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP*G)-3'
682 3rb6 0.94 36.11 1.85 731 108 39 39 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
683 2j6t 0.94 36.11 1.86 370 108 39 39 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
684 1zql 0.94 35.19 1.88 341 108 38 38 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
685 2j6s 0.94 36.11 1.88 370 108 39 39 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
686 3hk2 0.94 37.96 1.89 1392 108 41 41 0 3 No_SCOP_id ARGONAUTE & DNA & 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP *G)-3'
687 2zh2 0.94 38.89 1.90 471 108 42 42 0 3 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (34-MER)
688 3pw4 0.94 34.26 1.90 369 108 37 37 0 2 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
689 1zqp 0.94 35.19 1.91 341 108 38 38 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
690 2dr5 0.94 38.89 1.91 469 108 42 42 0 3 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (32-MER) & CCA-ADDING ENZYME
691 2hhq 0.94 37.04 1.91 607 108 40 40 0 4 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
692 3rzl 0.94 36.11 1.91 445 108 39 39 0 3 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
693 2jej 0.94 36.11 1.92 373 108 39 39 0 6 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
694 1n56 0.94 37.04 1.93 742 108 40 40 0 6 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
695 2bs0 0.94 36.11 1.94 408 108 39 39 0 1 No_SCOP_id COAT PROTEIN & 5'-R(*AP*UP*GP*CP*AP*UP*GP*UP*CP*UP *AP*AP*GP*AP*CP*UP*GP*CP*AP*U)-3'
696 3pvx 0.94 37.96 1.95 367 108 41 41 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
697 3os1 0.94 37.96 1.96 579 108 41 41 0 2 No_SCOP_id INTEGRASE & DNA & DNA & DNA
698 1s0o 0.94 37.04 1.97 742 108 40 40 0 4 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
699 2pud 0.94 39.81 1.98 355 108 43 43 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
700 2puf 0.94 40.74 1.99 355 108 44 44 0 3 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
701 2uvu 0.94 37.96 2.00 373 108 41 41 0 6 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
702 3jxy 0.94 37.96 2.06 255 108 41 40 1 4 a.118.1.0 ALKYLPURINE DNA GLYCOSYLASE ALKD & DNA & DNA
703 2ct8 0.94 41.67 2.08 1078 108 45 45 0 3 a.27.1.0;c.26.1.0 RNA (74-MER) & METHIONYL-TRNA SYNTHETASE
704 4dlg 0.94 38.89 2.09 565 108 42 42 0 5 c.55.3.5;e.8.1.1 DNA POLYMERASE I, THERMOSTABLE & DNA PRIMER & DNA TEMPLATE
705 3vk8 0.94 39.81 2.10 626 108 43 43 0 3 No_SCOP_id PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE & DNA & DNA
706 1ph7 0.94 42.59 2.13 711 108 46 46 0 3 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
707 1qaj 0.94 46.30 2.20 532 108 50 50 0 6 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
708 2fld 0.94 45.37 2.20 372 108 49 49 0 3 No_SCOP_id DNA & DNA ENDONUCLEASE I-MSOI
709 3orc 0.91 34.57 1.79 81 108 28 27 1 1 a.35.1.2 DNA & PROTEIN (CRO REPRESSOR)
710 1ahd 0.91 31.25 1.59 96 108 30 30 0 4 a.4.1.1 DNA & HOMEOTIC PROTEIN ANTENNAPEDIA
711 2pyj 0.90 25.00 0.97 1207 108 27 27 0 0 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
712 3n4m 0.90 25.93 1.04 394 108 28 28 0 4 a.4.5.4;a.60.3.1;b.82.3.2 CATABOLITE GENE ACTIVATOR & DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA & DNA & DNA
713 3g2c 0.90 26.85 1.26 516 108 29 29 0 2 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA
714 3g3y 0.90 26.85 1.27 516 108 29 29 0 0 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA
715 1wvl 0.90 27.78 1.39 179 108 30 30 0 2 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D, GCN4
716 2gje 0.90 30.56 1.44 304 108 33 33 0 0 d.18.1.4 GUIDE RNA 40-MER & RNA TETRAMER & MITOCHONDRIAL RNA-BINDING PROTEIN 2 & MITOCHONDRIAL RNA-BINDING PROTEIN 1
717 2vy2 0.90 28.70 1.44 183 108 31 30 1 1 No_SCOP_id PROTEIN LEAFY & DNA
718 1mwj 0.90 29.63 1.47 177 108 32 32 0 2 c.18.1.2 DNA & G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE
719 2lef 0.90 31.48 1.53 116 108 34 32 2 4 a.21.1.1 PROTEIN (LYMPHOID ENHANCER-BINDING FACTOR) & DNA & DNA
720 2r5z 0.90 31.48 1.56 174 108 34 34 0 3 a.4.1.1 HOMEOTIC PROTEIN SEX COMBS REDUCED & HOMEOBOX PROTEIN EXTRADENTICLE & DNA & DNA
721 3si8 0.90 30.56 1.57 440 108 33 33 0 3 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
722 2noi 0.90 31.48 1.59 332 108 34 34 0 2 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
723 2drb 0.90 31.48 1.61 472 108 34 33 1 2 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (35-MER) & CCA-ADDING ENZYME
724 3v4r 0.90 32.41 1.64 1178 108 35 35 0 0 No_SCOP_id UVRABC SYSTEM PROTEIN B & DNA: 5 -TACTGTTT-3
725 1lfu 0.90 32.41 1.67 110 108 35 35 0 2 a.4.1.1 DNA & HOMEOBOX PROTEIN PBX1
726 2f8x 0.90 35.19 1.69 733 108 38 38 0 1 No_SCOP_id DNA & MASTERMIND-LIKE PROTEIN 1
727 9ica 0.90 33.33 1.70 341 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
728 1m3h 0.90 32.41 1.71 343 108 35 35 0 2 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE
729 1zqc 0.90 34.26 1.71 341 108 37 37 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
730 2pfo 0.90 34.26 1.71 344 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 TEMPLATE & PRIMER & DOWNSTREAM PRIMER & DNA POLYMERASE LAMBDA
731 1zqg 0.90 34.26 1.73 341 108 37 37 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
732 7icr 0.90 33.33 1.78 339 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
733 1u8b 0.90 33.33 1.79 162 108 36 35 1 4 No_SCOP_id DNA & ADA POLYPROTEIN
734 1zqd 0.90 33.33 1.79 341 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
735 1zqi 0.90 35.19 1.79 341 108 38 38 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
736 2qnc 0.90 33.33 1.81 407 108 36 31 5 3 a.140.4.1;d.4.1.5 RECOMBINATION ENDONUCLEASE VII & DNA & DNA & DNA & DNA
737 4f1n 0.90 35.19 1.81 1773 108 38 38 0 2 No_SCOP_id KPAGO & RNA 5'-R(P*UP*AP*AP*AP*AP*AP*AP*AP*A)-3'
738 1zqq 0.90 34.26 1.82 341 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
739 9icr 0.90 35.19 1.83 339 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
740 9icx 0.90 34.26 1.83 339 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
741 1muh 0.90 35.19 1.84 495 108 38 38 0 2 c.55.3.4 DNA TRANSFERRED STRAND & DNA NON-TRANSFERRED STRAND & TN5 TRANSPOSASE
742 1zqr 0.90 34.26 1.84 341 108 37 37 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
743 2zh1 0.90 38.89 1.84 470 108 42 42 0 3 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & RNA (33-MER)
744 3oym 0.90 37.04 1.84 588 108 40 40 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
745 4ecy 0.90 37.04 1.84 449 108 40 40 0 4 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
746 8icc 0.90 34.26 1.85 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
747 1uvn 0.90 34.26 1.86 2004 108 37 37 0 2 e.8.1.6 RNA-DEPENDENT RNA POLYMERASE & 5'-R(*UP*UP*UP*UP*CP*CP)-3'
748 1zqo 0.90 34.26 1.87 341 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
749 2a07 0.90 35.19 1.87 571 108 38 37 1 1 a.4.5.14;a.4.5.0 DNA & FORKHEAD BOX PROTEIN P2
750 2br0 0.90 36.11 1.87 371 108 39 39 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
751 2izm 0.90 35.19 1.88 413 108 38 38 0 1 d.85.1.1 MS2 COAT PROTEIN & 5'-R(*AP*CP*AP*UP*GP*CP*GP*GP*AP*UP *CP*AP*CP*CP*CP*AP*UP*GP*U)-3'
752 2jei 0.90 36.11 1.88 372 108 39 39 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
753 3upq 0.90 36.11 1.88 329 108 39 39 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
754 8icy 0.90 35.19 1.88 342 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
755 1r71 0.90 36.11 1.90 581 108 39 39 0 1 a.4.14.1 DNA & TRANSCRIPTIONAL REPRESSOR PROTEIN KORB
756 1tx3 0.90 37.04 1.90 1054 108 40 40 0 3 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINDII
757 1zqk 0.90 35.19 1.90 341 108 38 38 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
758 4ed0 0.90 37.96 1.90 449 108 41 41 0 4 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
759 2c28 0.90 36.11 1.91 371 108 39 39 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
760 8ict 0.90 36.11 1.91 341 108 39 39 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
761 1mm8 0.90 37.96 1.92 495 108 41 41 0 2 c.55.3.4 ME DNA TRANSFERRED STRAND & ME DNA NON-TRANSFERRED STRAND & TN5 TRANSPOSASE
762 3sqi 0.90 39.81 1.94 418 108 43 43 0 0 No_SCOP_id KLLA0E03807P & DNA & DNA
763 1bdh 0.90 39.81 1.98 355 108 43 43 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
764 1nfk 0.90 39.81 2.06 646 108 43 43 0 2 b.1.18.1;b.2.5.3 DNA & PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
765 1r2y 0.90 37.96 2.06 296 108 41 41 0 5 a.156.1.2;b.113.1.1;g.39.1.8 DNA & MUTM
766 1n77 0.90 39.81 2.10 1086 108 43 41 2 2 a.97.1.1;c.26.1.1 TRNA(GLU) & GLUTAMYL-TRNA SYNTHETASE
767 1phj 0.90 44.44 2.14 699 108 48 48 0 1 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
768 2dxi 0.90 43.52 2.16 1086 108 47 45 2 3 a.97.1.1;c.26.1.1 TRNA & GLUTAMYL-TRNA SYNTHETASE
769 2i06 0.86 26.85 1.21 331 108 29 29 0 3 e.2.1.1 DNA REPLICATION TERMINUS SITE-BINDING PROTEIN & DNA & DNA
770 4be1 0.86 25.93 1.27 588 108 28 28 0 1 No_SCOP_id INTEGRASE & 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND) & 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND)
771 4e7i 0.86 26.85 1.27 590 108 29 29 0 1 No_SCOP_id PRO-POL POLYPROTEIN & DNA & DNA
772 2f5q 0.86 27.78 1.43 292 108 30 30 0 0 a.156.1.2;b.113.1.1;g.39.1.8 DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSIDASE
773 2w9b 0.86 29.63 1.44 739 108 32 32 0 3 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA POLYMERASE IV & DNA & DNA
774 2dr8 0.86 30.56 1.52 470 108 33 33 0 2 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (33-MER) & CCA-ADDING ENZYME
775 2nmv 0.86 30.56 1.52 662 108 33 33 0 3 No_SCOP_id DNA & UVRABC SYSTEM PROTEIN B
776 1wto 0.86 29.63 1.53 81 108 24 24 0 3 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
777 2hoi 0.86 31.48 1.53 1425 108 34 27 7 4 a.60.9.0;d.163.1.1 LOXP DNA & LOXP DNA & RECOMBINASE CRE
778 3pzp 0.86 31.48 1.56 935 108 34 34 0 3 No_SCOP_id DNA POLYMERASE KAPPA & DNA & DNA
779 1orp 0.86 29.63 1.57 233 108 32 32 0 5 a.96.1.1 DNA & ENDONUCLEASE III
780 1a6b 0.86 31.11 1.59 45 108 14 14 0 1 g.40.1.1 DNA & ZINC FINGER PROTEIN NCP10
781 1puf 0.86 31.48 1.60 190 108 34 32 2 3 a.4.1.1 DNA & PRE-B-CELL LEUKEMIA TRANSCRIPTION FACTOR-1
782 2i9g 0.86 30.56 1.60 355 108 33 33 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
783 2wiz 0.86 31.48 1.61 287 108 34 33 1 2 No_SCOP_id ARCHAEAL HJC & HALF-JUNCTION & HALF-JUNCTION
784 1j47 0.86 30.56 1.62 113 108 33 31 2 2 a.21.1.1 SEX-DETERMINING REGION Y PROTEIN & DNA & DNA
785 3ngo 0.86 29.63 1.62 340 108 32 32 0 1 No_SCOP_id CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 6-LIKE & DNA
786 2r5y 0.86 31.48 1.64 172 108 34 34 0 3 a.4.1.1 HOMEOTIC PROTEIN SEX COMBS REDUCED & HOMEOBOX PROTEIN EXTRADENTICLE & DNA & DNA
787 8icv 0.86 31.48 1.65 342 108 34 34 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
788 2vs8 0.86 32.41 1.69 701 108 35 33 2 4 No_SCOP_id HOMING ENDONUCLEASE I-DMOI & DNA & DNA & DNA & DNA
789 3d1n 0.86 34.26 1.69 1081 108 37 36 1 2 No_SCOP_id DNA & POU DOMAIN, CLASS 6, TRANSCRIPTION FACTOR 1
790 3kk1 0.86 32.41 1.71 1008 108 35 35 0 3 c.55.3.0;e.8.1.2 REVERSE TRANSCRIPTASE P66 SUBUNIT & REVERSE TRANSCRIPTASE P51 SUBUNIT & DNA & DNA
791 1xsp 0.86 34.26 1.72 349 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
792 3lk9 0.86 32.41 1.72 357 108 35 35 0 5 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
793 1jx4 0.86 33.33 1.73 365 108 36 36 0 2 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV (FAMILY Y)
794 2ktq 0.86 34.26 1.73 552 108 37 37 0 1 c.55.3.5;e.8.1.1 DNA & PROTEIN (LARGE FRAGMENT OF DNA POLYMERASE I)
795 2bcs 0.86 34.26 1.74 347 108 37 37 0 3 a.60.6.0;a.60.12.0;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
796 2ost 0.86 32.41 1.74 625 108 35 35 0 2 No_SCOP_id SYNTHETIC DNA 29 MER & SYNTHETIC DNA 29 MER & PUTATIVE ENDONUCLEASE
797 4a0a 0.86 32.41 1.74 1165 108 35 35 0 1 No_SCOP_id DNA DAMAGE-BINDING PROTEIN 1 & DNA DAMAGE-BINDING PROTEIN 2 & DNA & DNA
798 2ere 0.86 32.41 1.76 150 108 35 33 2 3 No_SCOP_id DNA & REGULATORY PROTEIN LEU3
799 4dl6 0.86 32.41 1.78 443 108 35 34 1 4 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
800 9ice 0.86 34.26 1.79 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
801 1j2b 0.86 33.33 1.80 1300 108 36 36 0 6 b.122.1.1;c.1.20.1;d.17.6.1 TRNA(VAL) & ARCHAEOSINE TRNA-GUANINE TRANSGLYCOSYLASE
802 3mvb 0.86 35.19 1.80 368 108 38 37 1 2 No_SCOP_id TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL & DNA & DNA
803 1qsy 0.86 37.04 1.82 564 108 40 40 0 2 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
804 1zqs 0.86 34.26 1.82 341 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
805 1zqt 0.86 34.26 1.83 341 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
806 8icz 0.86 34.26 1.83 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
807 8icg 0.86 35.19 1.85 341 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
808 9icv 0.86 34.26 1.86 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
809 2gjw 0.86 37.04 1.88 1296 108 40 40 0 6 c.52.2.1;d.75.1.1 5'-R(*GP*CP*GP*AP*CP*CP*GP*AP*CP*CP*AP*(DU) P*AP*GP*CP*UP*GP*CP*A)-3' & 5'-R(*UP*GP*CP*AP*GP*CP*GP*GP*UP*CP*AP*(A23))-3' & 5'-R(*AP*GP*GP*UP*CP*GP*C)-3' & TRNA-SPLICING ENDONUCLEASE
810 3aaf 0.86 34.26 1.89 246 108 37 34 3 3 No_SCOP_id WERNER SYNDROME ATP-DEPENDENT HELICASE & DNA
811 1rzt 0.86 34.26 1.90 1386 108 37 37 0 1 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
812 2dy4 0.86 34.26 1.90 3604 108 37 37 0 1 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
813 8icq 0.86 35.19 1.90 341 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
814 1lv5 0.86 37.04 1.94 1208 108 40 40 0 0 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE I
815 3gpy 0.86 37.96 1.98 303 108 41 41 0 5 No_SCOP_id DNA GLYCOSYLASE & DNA & DNA
816 2w9a 0.86 35.19 1.99 370 108 38 38 0 2 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
817 1rzr 0.86 37.96 2.00 1697 108 41 41 0 3 a.35.1.5;c.93.1.1;d.94.1.1 DNA & PHOSPHOCARRIER PROTEIN HPR
818 1z19 0.86 37.96 2.03 603 108 41 39 2 4 d.163.1.1 DNA & INTEGRASE
819 2puc 0.86 39.81 2.07 355 108 43 43 0 3 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
820 1ng9 0.86 44.44 2.13 1595 108 48 48 0 1 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA & DNA MISMATCH REPAIR PROTEIN MUTS
821 1ph5 0.86 43.52 2.16 709 108 47 47 0 1 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
822 1iv6 0.84 26.51 1.21 83 108 22 15 7 3 a.4.1.4 TELOMERIC REPEAT BINDING FACTOR 1 & DNA & DNA
823 1ouz 0.82 25.00 1.03 260 108 27 27 0 2 a.55.1.1 PHAGE LAMBDA H' SITE & DNA & DNA & INTEGRATION HOST FACTOR ALPHA-SUBUNIT & INTEGRATION HOST FACTOR BETA-SUBUNIT
824 2iie 0.82 25.00 1.04 274 108 27 27 0 2 No_SCOP_id PHAGE P H' SITE & DNA & DNA & INTEGRATION HOST FACTOR
825 3k57 0.82 25.00 1.04 811 108 27 27 0 1 No_SCOP_id DNA POLYMERASE II & DNA & DNA
826 3k59 0.82 25.00 1.05 810 108 27 27 0 1 No_SCOP_id DNA POLYMERASE II & DNA & DNA
827 2xm3 0.82 26.85 1.26 956 108 29 29 0 3 No_SCOP_id TRANSPOSASE & DRA2 TRANSPOSASE BINDING ELEMENT & DNA
828 1yyk 0.82 26.85 1.29 490 108 29 28 1 1 a.149.1.1;d.50.1.1 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3' & RIBONUCLEASE III
829 3ga6 0.82 26.85 1.32 553 108 29 29 0 0 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
830 1p3i 0.82 27.78 1.34 1048 108 30 30 0 2 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
831 1d3u 0.82 27.78 1.39 429 108 30 30 0 6 a.74.1.2;d.129.1.1 DNA 24-MER: BRE+TATA-BOX & DNA 23-MER: BRE+TATA-BOX & TATA-BINDING PROTEIN & TRANSCRIPTION INITIATION FACTOR IIB
832 1rrc 0.82 27.78 1.39 279 108 30 30 0 1 c.37.1.1;c.108.1.9 DNA & POLYNUCLEOTIDE KINASE
833 3tu4 0.82 28.70 1.39 1491 108 31 30 1 1 No_SCOP_id HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & REGULATORY PROTEIN SIR3 & DNA (146-MER) & DNA (146-MER)
834 2xgp 0.82 28.70 1.56 1058 108 31 31 0 1 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
835 2bq5 0.82 30.56 1.58 423 108 33 33 0 1 No_SCOP_id COAT PROTEIN & 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'
836 2izn 0.82 29.63 1.58 413 108 32 32 0 1 d.85.1.1 MS2 COAT PROTEIN & 5'-R(*AP*CP*AP*UP*CP*GP*CP*GP*AP*UP *UP*AP*CP*GP*GP*AP*UP*GP*U)-3'
837 6msf 0.82 30.56 1.58 411 108 33 33 0 1 d.85.1.1 PROTEIN (MS2 PROTEIN CAPSID) & RNA (5'- R(*CP*CP*AP*CP*AP*GP*UP*CP*AP*CP*UP*GP*GP*G)-3') & RNA (5'-R(*CP*AP*GP*UP*CP*AP*CP*UP*GP*G)-3')
838 7msf 0.82 30.56 1.58 412 108 33 33 0 1 d.85.1.1 MS2 PROTEIN CAPSID & 5'-R(*UP*CP*GP*CP*CP*AP*AP*CP*AP*GP*GP*CP*GP*G)- 3'
839 1bp7 0.82 30.56 1.61 704 108 33 33 0 4 d.95.2.1 DNA & PROTEIN (I-CREI)
840 1u1y 0.82 30.56 1.61 417 108 33 33 0 1 d.85.1.1 COAT PROTEIN & 5'-R(*CP*CP*GP*GP*(2PR) P*GP*GP*AP*UP*CP*AP*CP*CP*AP*CP*GP*G)-3'
841 2nuf 0.82 30.56 1.61 494 108 33 32 1 1 a.149.1.1;d.50.1.1 28-MER & RIBONUCLEASE III
842 5msf 0.82 31.48 1.65 421 108 34 34 0 1 d.85.1.1 MS2 PROTEIN CAPSID & 5'- R(*CP*CP*GP*GP*AP*GP*GP*AP*UP*CP*AP*CP*CP*AP*CP*GP*GP*G)- 3'
843 8ici 0.82 32.41 1.69 341 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
844 3mu6 0.82 33.33 1.71 352 108 36 36 0 3 d.88.1.1 MYOCYTE-SPECIFIC ENHANCER FACTOR 2A & DNA & DNA
845 1lq1 0.82 32.41 1.73 493 108 35 35 0 1 a.4.6.3 DNA & STAGE 0 SPORULATION PROTEIN A
846 1yfi 0.82 33.33 1.75 562 108 36 36 0 2 c.52.1.23 DNA & TYPE II RESTRICTION ENZYME MSPI
847 2i3q 0.82 32.41 1.77 352 108 35 35 0 1 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
848 1zqa 0.82 33.33 1.79 341 108 36 36 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
849 2ewj 0.82 34.26 1.81 331 108 37 37 0 1 e.2.1.1 DNA & DNA REPLICATION TERMINUS SITE-BINDING PROTEIN
850 2z9o 0.82 34.26 1.82 506 108 37 37 0 5 a.4.5.10 REPLICATION INITIATION PROTEIN & DNA (33-MER) & DNA (33-MER)
851 1uvl 0.82 33.33 1.83 2007 108 36 36 0 2 e.8.1.6 RNA-DEPENDENT RNA POLYMERASE & 5'-R(*UP*UP*UP*CP*CP)-3'
852 1zqm 0.82 33.33 1.84 341 108 36 36 0 5 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
853 1fjx 0.82 33.33 1.86 353 108 36 36 0 3 c.66.1.26 DNA & HHAI DNA METHYLTRANSFERASE
854 1ua0 0.82 36.11 1.86 601 108 39 39 0 3 c.55.3.5;e.8.1.1 DNA PRIMER STRAND & DNA TEMPLATE STRAND WITH AMINOFLUORENE ADDUCT & DNA POLYMERASE I
855 1zm5 0.82 36.11 1.87 314 108 39 39 0 3 d.89.1.5 DNA (25-MER) & TRWC
856 2zzn 0.82 35.19 1.87 813 108 38 38 0 3 No_SCOP_id UNCHARACTERIZED PROTEIN MJ0883 & RNA (71-MER)
857 1vkx 0.82 33.33 1.88 609 108 36 36 0 1 b.1.18.1;b.2.5.3 DNA & PROTEIN (NF-KAPPA B P50 SUBUNIT)
858 2xca 0.82 35.19 1.88 369 108 38 38 0 7 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
859 8icm 0.82 34.26 1.88 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
860 3go8 0.82 35.19 1.90 279 108 38 38 0 4 No_SCOP_id DNA GLYCOSYLASE & DNA & DNA
861 2r2r 0.82 37.96 1.96 271 108 41 41 0 3 e.8.1.2 REVERSE TRANSCRIPTASE & DNA & DNA
862 3gpu 0.82 36.11 1.97 275 108 39 39 0 4 a.156.1.2;b.113.1.1;g.39.1.8 DNA GLYCOSYLASE & DNA & DNA
863 1a35 0.82 40.74 2.02 510 108 44 44 0 1 d.163.1.2;e.15.1.1 DNA & PROTEIN (DNA TOPOISOMERASE I)
864 3m9n 0.82 36.11 2.02 368 108 39 39 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
865 1w7a 0.82 37.04 2.03 1588 108 40 40 0 3 a.113.1.1;c.37.1.12;c.55.6.1;d.75.2.1 DNA MISMATCH REPAIR PROTEIN MUTS & DNA & DNA
866 2h7g 0.82 40.74 2.04 337 108 44 44 0 2 No_SCOP_id DNA & DNA TOPOISOMERASE 1
867 3c5g 0.82 37.96 2.04 693 108 41 41 0 1 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
868 1eo3 0.82 40.74 2.07 495 108 44 44 0 3 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
869 3vk7 0.82 40.74 2.20 624 108 44 44 0 1 No_SCOP_id PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE & DNA & DNA
870 4euw 0.81 31.25 1.55 96 108 30 30 0 3 No_SCOP_id TRANSCRIPTION FACTOR SOX-9 & DNA & DNA
871 3d2w 0.80 34.57 1.91 81 108 28 28 0 1 d.58.7.1 TAR DNA-BINDING PROTEIN 43 & DNA
872 1c8c 0.79 35.00 1.85 80 108 28 28 0 3 b.34.13.1 DNA & DNA-BINDING PROTEIN 7A
873 2zh9 0.78 24.07 0.98 470 108 26 26 0 2 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (33-MER)
874 1ma7 0.78 25.00 1.27 706 108 27 27 0 1 a.60.9.1;d.163.1.1 LOXP & LOXP & CRE RECOMBINASE
875 3g00 0.78 25.93 1.33 530 108 28 28 0 0 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
876 1cgp 0.78 27.78 1.36 456 108 30 30 0 3 a.4.5.4;b.82.3.2 DNA & PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP) )
877 2o4i 0.78 28.70 1.40 444 108 31 31 0 0 c.55.3.5 DNA & THREE PRIME REPAIR EXONUCLEASE 1
878 1eqz 0.78 27.78 1.41 1170 108 30 29 1 3 a.22.1.1 146 NUCLEOTIDES LONG DNA & PROTEIN (HISTONE H2A) & PROTEIN (HISTONE H2B) & PROTEIN (HISTONE H3) & PROTEIN (HISTONE H4)
879 1owf 0.78 27.78 1.41 260 108 30 30 0 2 a.55.1.1 PHAGE LAMBDA H' SITE & DNA & DNA & INTEGRATION HOST FACTOR ALPHA-SUBUNIT & INTEGRATION HOST FACTOR BETA-SUBUNIT
880 2zh6 0.78 26.85 1.42 471 108 29 28 1 0 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (34-MER)
881 3cws 0.78 28.70 1.52 1172 108 31 30 1 0 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
882 3irq 0.78 30.56 1.57 279 108 33 33 0 1 a.4.5.19 DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE & DNA & DNA
883 1o3q 0.78 32.41 1.58 226 108 35 35 0 3 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR PROTEIN
884 2bu1 0.78 29.63 1.59 419 108 32 32 0 1 d.85.1.1 MS2 COAT PROTEIN & 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *5BU*AP*CP*CP*CP*AP*UP*GP*U)-3'
885 1n48 0.78 30.56 1.64 370 108 33 33 0 1 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
886 3bjy 0.78 31.48 1.64 454 108 34 34 0 2 No_SCOP_id DNA REPAIR PROTEIN REV1 & DNA & DNA
887 3osp 0.78 30.56 1.65 454 108 33 33 0 2 No_SCOP_id DNA REPAIR PROTEIN REV1 & DNA & DNA
888 1c0a 0.78 31.48 1.68 653 108 34 33 1 2 b.40.4.1;d.74.4.1;d.104.1.1 ASPARTYL TRNA & ASPARTYL TRNA SYNTHETASE
889 3au6 0.78 31.48 1.69 578 108 34 34 0 2 No_SCOP_id DNA POLYMERASE BETA FAMILY (X FAMILY) & DNA & DNA
890 1n39 0.78 32.41 1.70 343 108 35 35 0 2 a.96.1.3;d.129.1.2 DNA COMPLEMENT STRAND & DNA INHIBITOR STRAND & N-GLYCOSYLASE/DNA LYASE
891 3cvs 0.78 29.63 1.70 1174 108 32 31 1 0 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
892 3mda 0.78 33.33 1.75 346 108 36 36 0 2 No_SCOP_id DNA POLYMERASE LAMBDA & DNA & DNA & DNA
893 3mr2 0.78 31.48 1.75 449 108 34 33 1 2 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
894 1s97 0.78 33.33 1.76 1484 108 36 36 0 4 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
895 2pyl 0.78 30.56 1.76 595 108 33 33 0 1 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
896 2zh5 0.78 33.33 1.76 471 108 36 36 0 2 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (34-MER)
897 1p59 0.78 33.33 1.78 231 108 36 35 1 3 a.96.1.1 DNA & ENDONUCLEASE III
898 2hw8 0.78 32.41 1.81 261 108 35 35 0 2 e.24.1.1 36-MER & 50S RIBOSOMAL PROTEIN L1
899 3amu 0.78 34.26 1.82 479 108 37 37 0 3 No_SCOP_id PUTATIVE UNCHARACTERIZED PROTEIN & RNA (78-MER)
900 9icm 0.78 33.33 1.82 339 108 36 36 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
901 2xzl 0.78 35.19 1.83 764 108 38 38 0 3 No_SCOP_id ATP-DEPENDENT HELICASE NAM7 & 5- R(*UP*UP*UP*UP*UP*UP*UP*UP*U) -3
902 3bq0 0.78 34.26 1.83 364 108 37 37 0 0 d.240.1.1;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
903 8ick 0.78 34.26 1.83 342 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
904 2gws 0.78 35.19 1.85 1389 108 38 38 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
905 8icb 0.78 34.26 1.85 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
906 2w42 0.78 32.41 1.86 806 108 35 35 0 1 No_SCOP_id PUTATIVE UNCHARACTERIZED PROTEIN & DNA & DNA
907 8icx 0.78 34.26 1.86 341 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
908 1pt3 0.78 32.41 1.87 304 108 35 34 1 2 d.4.1.1 5'-GCGATCGC-3' & COLICIN E7
909 3f2b 0.78 37.04 1.94 1025 108 40 39 1 3 No_SCOP_id DNA-DIRECTED DNA POLYMERASE III ALPHA CHAIN & DNA & DNA
910 2jeg 0.78 35.19 1.96 371 108 38 38 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
911 1s9f 0.78 36.11 1.97 1484 108 39 39 0 1 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
912 3bq1 0.78 36.11 1.97 367 108 39 39 0 3 d.240.1.1;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
913 3rb4 0.78 36.11 1.97 732 108 39 39 0 5 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
914 1r2z 0.78 37.04 1.99 296 108 40 40 0 5 a.156.1.2;b.113.1.1;g.39.1.8 DNA & MUTM
915 1kq2 0.78 37.04 2.01 372 108 40 40 0 0 b.38.1.2 5'-R(*AP*UP*UP*UP*UP*UP*G)-3' & HOST FACTOR FOR Q BETA
916 1zrd 0.78 36.11 2.03 476 108 39 39 0 0 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR
917 3ugo 0.78 37.96 2.04 195 108 41 41 0 3 No_SCOP_id RNA POLYMERASE SIGMA FACTOR & DNA
918 1jft 0.78 40.74 2.07 357 108 44 44 0 4 a.35.1.5;c.93.1.1 DNA & PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
919 2pub 0.78 39.81 2.08 355 108 43 43 0 4 a.35.1.5;c.93.1.1 DNA & PURINE REPRESSOR
920 1qpz 0.78 40.74 2.11 356 108 44 44 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
921 2p6r 0.78 43.52 2.15 723 108 47 47 0 2 a.4.5.43;a.289.1.2;c.37.1.19 25-MER & DNA & AFUHEL308 HELICASE
922 3kmd 0.78 44.44 2.20 838 108 48 48 0 3 b.2.5.2 CELLULAR TUMOR ANTIGEN P53 & DNA
923 2qqp 0.78 43.52 2.23 2191 108 47 47 0 0 No_SCOP_id LARGE CAPSID PROTEIN & SMALL CAPSID PROTEIN & RNA (5'-R(*UP*UP*UP*U)-3')
924 1azp 0.77 25.61 1.26 82 108 21 21 0 4 b.34.13.1 DNA & PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
925 1wtr 0.77 25.61 1.34 82 108 21 21 0 3 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
926 1xyi 0.77 26.83 1.39 82 108 22 22 0 2 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
927 1lcd 0.76 21.92 0.70 73 108 16 16 0 1 a.35.1.5 DNA & LAC REPRESSOR
928 4ed6 0.74 23.15 0.99 452 108 25 25 0 0 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
929 2hof 0.74 24.07 1.03 693 108 26 26 0 2 a.60.9.1;d.163.1.1 LOXP DNA & LOXP DNA & RECOMBINASE CRE
930 4ecv 0.74 24.07 1.05 450 108 26 26 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
931 4ecq 0.74 24.07 1.06 449 108 26 26 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
932 1odg 0.74 25.93 1.27 156 108 28 28 0 3 c.52.1.15 DNA MISMATCH ENDONUCLEASE & DNA
933 4be0 0.74 25.93 1.30 588 108 28 28 0 2 No_SCOP_id PFV INTEGRASE & 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND) & 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND)
934 1f66 0.74 27.78 1.39 1061 108 30 29 1 3 a.22.1.1 PALINDROMIC 146 BASE PAIR DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A.Z & HISTONE H2B
935 3g4t 0.74 26.85 1.43 522 108 29 29 0 0 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
936 1p3a 0.74 26.85 1.46 1042 108 29 29 0 3 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
937 2der 0.74 27.78 1.49 852 108 30 29 1 4 No_SCOP_id TRNA & TRNA-SPECIFIC 2-THIOURIDYLASE MNMA
938 1kx4 0.74 27.78 1.51 1049 108 30 29 1 2 a.22.1.1 DNA & HISTONE H2B.2
939 3sjm 0.74 28.70 1.52 144 108 31 30 1 2 a.4.1.4 DNA & TELOMERIC REPEAT-BINDING FACTOR 2
940 4aik 0.74 32.41 1.56 323 108 35 35 0 3 No_SCOP_id TRANSCRIPTIONAL REGULATOR SLYA & ROVA PROMOTER FRAGMENT, 5'-D(*AP*TP*GP*AP*TP*AP*TP*TP *AP*TP**TP*TP*AP*TP*AP*TP*GP*AP*TP*AP*A)-3' & ROVA PROMOTER FRAGMENT, 5'-D(*TP*TP*TP*AP*TP*CP*AP*TP *AP*TP*AP*AP*AP*TP*AP*AP*TP*AP*TP*CP*A)-3'
941 2o4a 0.74 28.70 1.60 108 108 31 31 0 4 a.35.1.7 DNA-BINDING PROTEIN SATB1 & DNA & DNA
942 1w0u 0.74 29.63 1.61 143 108 32 31 1 2 a.4.1.4 TELOMERIC REPEAT BINDING FACTOR 2 & DNA & DNA
943 2bny 0.74 29.63 1.64 415 108 32 32 0 1 d.85.1.1 MS2 COAT PROTEIN & 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*UP *UP*AP*CP*CP*CP*AP*UP*GP*U)-3'
944 3hos 0.74 32.41 1.64 832 108 35 35 0 1 No_SCOP_id TRANSPOSABLE ELEMENT MARINER, COMPLETE CDS & MOS1 NTS INVERTED REPEAT DNA & MOS1 TS INVERTED REPEAT DNA
945 3in5 0.74 31.48 1.66 923 108 34 34 0 4 No_SCOP_id DNA POLYMERASE KAPPA & DNA & DNA
946 7icu 0.74 32.41 1.66 339 108 35 35 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
947 3isb 0.74 31.48 1.67 358 108 34 34 0 3 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
948 2ntz 0.74 28.70 1.68 407 108 31 31 0 2 No_SCOP_id DNA & PARB
949 2xrz 0.74 30.56 1.70 930 108 33 33 0 3 No_SCOP_id DEOXYRIBODIPYRIMIDINE PHOTOLYASE & CPD-COMPRISING OLIGONUCLEOTIDE & COUNTERSTRAND-OLIGONUCLEOTIDE
950 1j46 0.74 31.48 1.71 113 108 34 32 2 2 a.21.1.1 SEX-DETERMINING REGION Y PROTEIN & DNA & DNA
951 1rep 0.74 32.41 1.73 256 108 35 35 0 4 a.4.5.10 DNA & PROTEIN (REPLICATION INITIATION PROTEIN)
952 1le9 0.74 33.33 1.74 1218 108 36 36 0 2 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT
953 2r2u 0.74 32.41 1.74 270 108 35 35 0 3 e.8.1.2 REVERSE TRANSCRIPTASE & DNA & DNA
954 4mht 0.74 32.41 1.75 350 108 35 35 0 3 c.66.1.26 DNA & PROTEIN (HHAI METHYLTRANSFERASE (E.C.2.1.1.73))
955 1q3v 0.74 31.48 1.79 1441 108 34 34 0 1 a.60.9.1;d.163.1.1 LOXP DNA & LOXP DNA & LOXP DNA & CRE RECOMBINASE
956 1m0e 0.74 34.26 1.80 350 108 37 37 0 3 c.66.1.26 DNA & MODIFICATION METHYLASE HHAI
957 2noh 0.74 32.41 1.82 341 108 35 35 0 2 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
958 2uyc 0.74 32.41 1.83 351 108 35 32 3 2 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
959 7ico 0.74 34.26 1.83 339 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
960 3uq0 0.74 34.26 1.84 334 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
961 3hxm 0.74 34.26 1.85 658 108 37 37 0 8 No_SCOP_id ARGONAUTE & DNA & RNA (5'- R(*UP*AP*UP*AP*CP*AP*AP*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3')
962 7ict 0.74 35.19 1.87 339 108 38 38 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
963 1nh3 0.74 34.26 1.89 511 108 37 37 0 5 d.163.1.2;e.15.1.1 DNA & DNA TOPOISOMERASE I
964 3c2l 0.74 33.33 1.89 357 108 36 36 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
965 3px7 0.74 34.26 1.90 560 108 37 37 0 0 e.10.1.1 DNA TOPOISOMERASE & DNA & DNA
966 1zjn 0.74 33.33 1.91 356 108 36 36 0 2 a.60.6.1;a.60.12.1;d.218.1.2 D(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C )-3' & DNA & DNA & DNA POLYMERASE BETA
967 3erc 0.74 31.48 1.92 1485 108 34 34 0 3 No_SCOP_id CAP-SPECIFIC MRNA (NUCLEOSIDE-2'-O-)- METHYLTRANSFERASE & POLY(A) POLYMERASE CATALYTIC SUBUNIT & RNA/DNA CHIMERA (5'-D(CP*)R(UP*UP*)D(CP*C)-3') & RNA/DNA CHIMERA (5'-D(CP*)R(UP*UP*)-D(C)-3') & RNA/DNA CHIMERA (5'-D(CP*CP*)R(UP*UP*)D(C)-3')
968 3f2c 0.74 37.04 1.93 1024 108 40 39 1 3 No_SCOP_id GEOBACILLUS KAUSTOPHILUS DNA POLC & DNA & DNA
969 2a3v 0.74 37.04 1.96 1396 108 40 40 0 1 No_SCOP_id DNA (31-MER) & DNA (34-MER) & SITE-SPECIFIC RECOMBINASE INTI4
970 2f5p 0.74 35.19 1.96 279 108 38 38 0 4 No_SCOP_id DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSIDASE
971 2hvs 0.74 37.04 1.96 732 108 40 40 0 1 No_SCOP_id DNA & T4 RNA LIGASE 2
972 3pta 0.74 35.19 1.97 942 108 38 38 0 2 No_SCOP_id DNA (CYTOSINE-5)-METHYLTRANSFERASE 1 & DNA & DNA
973 1s0n 0.74 37.04 2.00 372 108 40 36 4 2 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
974 3mfk 0.74 34.26 2.00 306 108 37 37 0 3 No_SCOP_id PROTEIN C-ETS-1 & STROMELYSIN-1 PROMOTER DNA & STROMELYSIN-1 PROMOTER DNA
975 1a1v 0.74 38.89 2.02 435 108 42 42 0 4 c.37.1.14 PROTEIN (NS3 PROTEIN) & DNA
976 2ake 0.74 36.11 2.03 445 108 39 39 0 1 c.26.1.1 TRANSFER RNA-TRP & TRYPTOPHANYL-TRNA SYNTHETASE
977 2f5o 0.74 36.11 2.04 279 108 39 39 0 5 No_SCOP_id DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSIDASE
978 4fts 0.74 37.96 2.05 1001 108 41 41 0 4 No_SCOP_id CAPSID PROTEIN ALPHA & RANDOM CELLULAR RNAS
979 1qqb 0.74 40.74 2.13 355 108 44 44 0 4 a.35.1.5;c.93.1.1 DNA & PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
980 3hzi 0.74 40.74 2.13 512 108 44 44 0 1 No_SCOP_id PROTEIN HIPA & HTH-TYPE TRANSCRIPTIONAL REGULATOR HIPB & DNA
981 1nop 0.74 40.74 2.17 867 108 44 44 0 0 d.136.1.3 DNA & TOPOISOMERASE I-DERIVED PEPTIDE
982 1x0f 0.73 31.33 1.78 83 108 26 26 0 1 d.58.7.1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0 & DNA
983 1ckt 0.73 23.53 1.04 102 108 24 23 1 0 a.21.1.1 DNA & HIGH MOBILITY GROUP 1 PROTEIN
984 1skn 0.72 35.58 1.94 104 108 37 37 0 6 a.37.1.1 DNA & DNA-BINDING DOMAIN OF SKN-1
985 1dp7 0.71 37.78 2.01 90 108 34 33 1 2 a.4.5.20 DNA & MHC CLASS II TRANSCRIPTION FACTOR HRFX1
986 4ecw 0.70 24.07 1.06 452 108 26 26 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
987 2fkc 0.70 25.00 1.11 534 108 27 27 0 4 No_SCOP_id DNA & R.HINP1I RESTRICTION ENDONUCLEASE
988 4bac 0.70 26.85 1.31 616 108 29 29 0 1 No_SCOP_id INTEGRASE & DNA & DNA (38-MER) & DNA
989 3g0r 0.70 25.93 1.33 530 108 28 28 0 0 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
990 3gfi 0.70 27.78 1.33 308 108 30 30 0 2 No_SCOP_id 146AA LONG HYPOTHETICAL TRANSCRIPTIONAL REGULATOR & DNA & DNA
991 2owo 0.70 27.78 1.35 637 108 30 30 0 2 No_SCOP_id 26-MER & DNA & DNA & DNA LIGASE
992 3lob 0.70 26.85 1.36 960 108 29 29 0 3 No_SCOP_id COAT PROTEIN BETA & COAT PROTEIN GAMMA & RNA (5'-R(*UP*UP*U*AP*UP*CP*UP*(P))-3')
993 4ecu 0.70 25.00 1.37 450 108 27 27 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
994 4gz1 0.70 26.85 1.42 520 108 29 29 0 3 No_SCOP_id TYROSYL-DNA PHOSPHODIESTERASE 2 & DNA
995 2cv5 0.70 27.78 1.48 1053 108 30 28 2 1 a.22.1.1 DNA (146-MER) & HISTONE H3.1 & HISTONE H4 & HISTONE H2A.A & HISTONE H2B K
996 1u0c 0.70 27.78 1.49 352 108 30 30 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
997 2det 0.70 27.78 1.51 435 108 30 30 0 2 No_SCOP_id TRNA & TRNA-SPECIFIC 2-THIOURIDYLASE MNMA
998 3adc 0.70 27.78 1.53 657 108 30 30 0 2 No_SCOP_id L-SERYL-TRNA(SEC) KINASE & SELENOCYSTEINE TRNA
999 1cf7 0.70 28.70 1.54 179 108 31 31 0 2 a.4.5.17 DNA & PROTEIN (TRANSCRIPTION FACTOR DP-2)
1000 3nh0 0.70 27.78 1.54 420 108 30 30 0 0 c.55.3.5 RIBONUCLEASE T & DNA
1001 1ouq 0.70 28.70 1.55 1441 108 31 30 1 1 a.60.9.1;d.163.1.1 LOXP DNA & LOXP DNA & LOXP DNA & CRE RECOMBINASE
1002 3av2 0.70 27.78 1.55 1044 108 30 29 1 2 a.22.1.1 HISTONE H3.3 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
1003 2pi4 0.70 31.48 1.56 898 108 34 34 0 5 e.8.1.3 DNA & DNA-DIRECTED RNA POLYMERASE
1004 3d4v 0.70 28.70 1.57 1172 108 31 30 1 0 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
1005 3os0 0.70 28.70 1.57 603 108 31 31 0 6 No_SCOP_id INTEGRASE & DNA & DNA & DNA & DNA
1006 3cw7 0.70 28.70 1.63 1174 108 31 30 1 0 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
1007 1f7y 0.70 28.70 1.70 139 108 31 31 0 2 a.16.1.2 16S RIBOSOMAL RNA FRAGMENT & 30S RIBOSOMAL PROTEIN S15
1008 1m6x 0.70 33.33 1.75 1726 108 36 36 0 3 a.60.9.1;d.163.1.1 SYMMETRIZED FRT SITE & SYMMETRIZED FRT SITE & SYMMETRIZED FRT SITE & FLP RECOMBINASE & FLP RECOMBINASE
1009 4crx 0.70 31.48 1.75 714 108 34 34 0 1 a.60.9.1;d.163.1.1 DNA (35 NUCLEOTIDE CRE RECOGINITION SITE) & PROTEIN (CRE RECOMBINASE)
1010 3hvr 0.70 33.33 1.78 1370 108 36 36 0 0 No_SCOP_id ARGONAUTE & DNA & 5'-R(*UP*AP*UP*AP*CP*AP*AP*CP*CP*UP*AP*CP*UP*AP*CP*CP*UP*CP *G)-3'
1011 10mh 0.70 33.33 1.79 349 108 36 36 0 3 c.66.1.26 DNA & PROTEIN (CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI)
1012 3pvv 0.70 33.33 1.79 243 108 36 35 1 1 No_SCOP_id CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA & DNA & DNA
1013 2odi 0.70 31.48 1.83 508 108 34 34 0 3 No_SCOP_id DNA & R.BCNI
1014 3p6y 0.70 35.19 1.83 2217 108 38 38 0 3 No_SCOP_id CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 5 & CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 6 & 5'-R(*UP*GP*UP*AP*A)-3'
1015 3zql 0.70 33.33 1.84 992 108 36 36 0 1 No_SCOP_id PUTATIVE REPRESSOR SIMREG2 & DNA & DNA
1016 1eyu 0.70 36.11 1.85 334 108 39 39 0 2 c.52.1.6 DNA & TYPE II RESTRICTION ENZYME PVUII
1017 1qzw 0.70 34.26 1.85 1908 108 37 37 0 0 a.24.13.1;a.36.1.1;c.37.1.10 7S RNA & SIGNAL RECOGNITION 54 KDA PROTEIN
1018 2a6o 0.70 30.56 1.85 348 108 33 33 0 4 d.58.57.1 DNA & ISHP608 TRANSPOSASE
1019 1zqb 0.70 34.26 1.87 341 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1020 3gv5 0.70 33.33 1.87 784 108 36 36 0 3 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & DNA & DNA
1021 3nh2 0.70 31.48 1.87 842 108 34 34 0 1 c.55.3.5 RIBONUCLEASE T & DNA
1022 1yrn 0.70 33.33 1.88 169 108 36 36 0 4 a.4.1.1 DNA & PROTEIN (MAT ALPHA2 HOMEODOMAIN)
1023 1sa3 0.70 34.26 1.89 560 108 37 36 1 1 c.52.1.23 DNA & TYPE II RESTRICTION ENZYME MSPI
1024 4ftb 0.70 35.19 1.89 1016 108 38 38 0 2 No_SCOP_id CAPSID PROTEIN BETA & CAPSID PROTEIN GAMMA & FLOCK HOUSE VIRUS GENOMIC RNA
1025 3rb0 0.70 34.26 1.90 737 108 37 37 0 6 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1026 1tez 0.70 35.19 1.91 1946 108 38 38 0 4 a.99.1.1;c.28.1.1 DNA & DEOXYRIBODIPYRIMIDINE PHOTOLYASE
1027 7icf 0.70 34.26 1.91 339 108 37 37 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1028 3icq 0.70 34.26 1.92 2346 108 37 37 0 1 No_SCOP_id EXPORTIN-T & GTP-BINDING NUCLEAR PROTEIN GSP1/CNR1 & RNA (62-MER)
1029 1ea4 0.70 36.11 1.93 556 108 39 37 2 1 a.43.1.3 TRANSCRIPTIONAL REPRESSOR COPG & DNA & DNA
1030 2crx 0.70 34.26 1.98 683 108 37 37 0 2 a.60.9.1;d.163.1.1 DNA 35-MER & PROTEIN (CRE RECOMBINASE)
1031 2h27 0.70 35.19 2.00 186 108 38 38 0 2 a.4.13.2 DNA & RNA POLYMERASE SIGMA E FACTOR
1032 3b39 0.70 35.19 2.01 638 108 38 38 0 2 e.13.1.1 DNA PRIMASE & DNA
1033 1xsl 0.70 36.11 2.02 1389 108 39 39 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
1034 3clz 0.70 37.04 2.02 919 108 40 40 0 1 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
1035 1s0m 0.70 36.11 2.06 740 108 39 39 0 4 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
1036 3eh8 0.70 39.81 2.06 948 108 43 38 5 3 d.95.2.1 INTRON-ENCODED DNA ENDONUCLEASE I-ANII & 31-MER & 31-MER
1037 1qzh 0.70 39.81 2.07 1056 108 43 43 0 2 b.40.4.3 TELOMERIC SINGLE-STRANDED DNA & PROTECTION OF TELOMERES PROTEIN 1
1038 1pnr 0.70 40.74 2.10 355 108 44 44 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
1039 1uvm 0.70 37.04 2.11 2007 108 40 40 0 3 e.8.1.6 RNA-DEPENDENT RNA POLYMERASE & 5'-R(*UP*UP*UP*CP*CP)-3'
1040 3i0w 0.70 37.04 2.12 314 108 40 37 3 5 No_SCOP_id 8-OXOGUANINE-DNA-GLYCOSYLASE & DNA & DNA
1041 2pua 0.70 40.74 2.13 356 108 44 44 0 3 a.35.1.5;c.93.1.1 DNA & PURINE REPRESSOR
1042 1le5 0.70 38.89 2.14 1222 108 42 41 1 4 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT
1043 1p4e 0.70 41.67 2.18 1748 108 45 45 0 2 a.60.9.1;d.163.1.1 DNA & RECOMBINASE FLP PROTEIN
1044 3fd2 0.70 42.59 2.24 386 108 46 46 0 4 No_SCOP_id DNA ENDONUCLEASE I-MSOI, LINKER, DNA ENDONUCLEASE I-MSOI & DNA & DNA
1045 3vke 0.65 21.30 0.73 313 108 23 23 0 4 d.51.1.1 POLY(RC)-BINDING PROTEIN 1 & DNA
1046 4e7k 0.65 21.30 0.86 583 108 23 23 0 0 No_SCOP_id PRO-POL POLYPROTEIN & DNA & DNA & DNA
1047 1fjl 0.65 22.22 0.87 224 108 24 24 0 3 a.4.1.1 PAIRED PROTEIN & DNA & DNA & DNA
1048 2rkj 0.65 22.22 0.92 3904 108 24 24 0 0 No_SCOP_id TYROSYL-TRNA SYNTHETASE & RNA (238-MER) & RNA (5'-R(P*GP*CP*UP*U)-3')
1049 1wtp 0.65 25.00 1.13 155 108 27 27 0 3 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
1050 2p66 0.65 24.07 1.14 358 108 26 26 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
1051 1yf3 0.65 23.15 1.21 534 108 25 25 0 0 c.66.1.28 DNA & DNA ADENINE METHYLASE
1052 1pvq 0.65 25.00 1.27 710 108 27 27 0 1 a.60.9.1;d.163.1.1 34-MER & 34-MER & RECOMBINASE CRE
1053 1rpz 0.65 25.93 1.29 278 108 28 28 0 1 c.37.1.1;c.108.1.9 DNA & POLYNUCLEOTIDE KINASE
1054 4ecz 0.65 25.00 1.34 449 108 27 27 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1055 2xcp 0.65 26.85 1.35 739 108 29 29 0 1 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1056 4ed2 0.65 25.00 1.35 449 108 27 27 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1057 4ed8 0.65 25.00 1.35 450 108 27 27 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1058 4gz2 0.65 25.93 1.35 518 108 28 28 0 3 No_SCOP_id TYROSYL-DNA PHOSPHODIESTERASE 2 & DNA
1059 4ed1 0.65 25.00 1.36 449 108 27 27 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1060 3azk 0.65 26.85 1.37 1049 108 29 29 0 2 No_SCOP_id HISTONE H3.1 & HISTONE H4 & HISTONE H2A TYPE 1-B/E & HISTONE H2B TYPE 1-J & 146-MER DNA
1061 4ed7 0.65 25.00 1.37 449 108 27 27 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1062 4f1h 0.65 25.93 1.37 506 108 28 28 0 3 No_SCOP_id DNA & TYROSYL-DNA PHOSPHODIESTERASE 2
1063 2hdd 0.65 27.78 1.49 153 108 30 18 12 3 a.4.1.1 DNA & PROTEIN (ENGRAILED HOMEODOMAIN Q50K)
1064 2xgq 0.65 27.78 1.51 1058 108 30 30 0 7 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
1065 2zh4 0.65 27.78 1.53 471 108 30 29 1 0 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (34-MER)
1066 1lmb 0.65 28.70 1.55 219 108 31 31 0 1 a.35.1.2 DNA & PROTEIN (LAMBDA REPRESSOR)
1067 3klg 0.65 28.70 1.55 2018 108 31 31 0 2 No_SCOP_id REVERSE TRANSCRIPTASE/RIBONUCLEASE H & P51 RT & DNA & DNA
1068 2erg 0.65 27.78 1.58 160 108 30 30 0 2 No_SCOP_id DNA & REGULATORY PROTEIN LEU3
1069 1emj 0.65 29.63 1.61 241 108 32 32 0 3 c.18.1.1 DNA & URACIL-DNA GLYCOSYLASE
1070 1hys 0.65 31.48 1.63 1457 108 34 34 0 3 b.1.1.1;b.1.1.2;c.55.3.1;e.8.1.2 5'- R(*UP*CP*AP*GP*CP*CP*AP*CP*UP*UP*UP*UP*UP*AP*AP*AP*AP*GP*AP *AP*AP*AP*G)-3' & DNA & HIV-1 REVERSE TRANSCRIPTASE & HIV-1 REVERSE TRANSCRIPTASE & FAB-28 MONOCLONAL ANTIBODY FRAGMENT LIGHT CHAIN & FAB-28 MONOCLONAL ANTIBODY FRAGMENT HEAVY CHAIN
1071 2rdj 0.65 31.48 1.68 741 108 34 34 0 3 d.240.1.1;e.8.1.7 DNA POLYMERASE IV & DNA & DNA & DNA
1072 1bpz 0.65 29.63 1.70 363 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA)
1073 2hot 0.65 30.56 1.70 156 108 33 33 0 2 a.4.1.1 DNA & SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED
1074 1vas 0.65 31.48 1.71 163 108 34 34 0 1 a.18.1.1 DNA & PROTEIN (T4 ENDONUCLEASE V (E.C.3.1.25.1))
1075 2iz9 0.65 30.56 1.73 415 108 33 33 0 0 d.85.1.1 MS2 COAT PROTEIN & 5'-R(*AP*CP*AP*UP*GP*AP*GP*GP*AP*U ONEP *AP*CP*CP*CP*AP*UP*GP*U)-3'
1076 4gjp 0.65 30.56 1.73 1047 108 33 33 0 4 No_SCOP_id HAX3 & DNA & DNA
1077 1euq 0.65 30.56 1.74 601 108 33 33 0 2 b.53.1.2;c.26.1.1 GLUTAMINYL TRNA & GLUTAMINYL-TRNA SYNTHETASE
1078 3cwt 0.65 28.70 1.74 1172 108 31 30 1 1 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
1079 1qtq 0.65 31.48 1.76 603 108 34 34 0 2 b.53.1.2;c.26.1.1 RNA (TRNA GLN II ) & PROTEIN (GLUTAMINYL-TRNA SYNTHETASE)
1080 2vbl 0.65 30.56 1.76 352 108 33 33 0 2 d.95.2.1 DNA ENDONUCLEASE I-CREI & DNA ENDONUCLEASE I-CREI & DNA & DNA & DNA & DNA
1081 3igc 0.65 31.48 1.76 345 108 34 34 0 1 No_SCOP_id DNA TOPOISOMERASE 1 & DNA & DNA & DNA
1082 1w0t 0.65 29.63 1.78 142 108 32 30 2 2 a.4.1.4 TELOMERIC REPEAT BINDING FACTOR 1 & DNA & DNA
1083 3mx9 0.65 30.56 1.78 346 108 33 33 0 2 No_SCOP_id PROTEIN SCV3V2(G19S) & DNA & DNA
1084 1h3e 0.65 30.56 1.80 506 108 33 33 0 2 c.26.1.1;d.66.1.4 TYROSYL-TRNA SYNTHETASE & WILD-TYPE TRNATYR(GUA)
1085 2cax 0.65 32.41 1.81 273 108 35 33 2 0 a.43.1.4 ORF OMEGA & DNA & DNA & DNA & DNA
1086 4fte 0.65 33.33 1.81 1002 108 36 36 0 0 No_SCOP_id CAPSID PROTEIN ALPHA & RANDOM CELLULAR RNAS
1087 1rvc 0.65 33.33 1.82 510 108 36 36 0 3 c.52.1.2 DNA & PROTEIN (ECO RV (E.C.3.1.21.4))
1088 1yfj 0.65 32.41 1.84 1665 108 35 35 0 6 c.66.1.28 DNA & DNA ADENINE METHYLASE
1089 3gz6 0.65 34.26 1.84 492 108 37 37 0 3 No_SCOP_id MUTT/NUDIX FAMILY PROTEIN & DNA (27-MER) & DNA (27-MER)
1090 1k82 0.65 33.33 1.85 1140 108 36 36 0 5 a.156.1.2;b.113.1.1;g.39.1.8 DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
1091 2pi0 0.65 35.19 1.85 485 108 38 38 0 6 a.4.5.23 INTERFERON REGULATORY FACTOR 3 & PRDIII-I REGION OF HUMAN INTERFERON-B PROMOTER STRAND 1 & PRDIII-I REGION OF HUMAN INTERFERON-B PROMOTER STRAND 2
1092 3kqn 0.65 31.48 1.85 443 108 34 34 0 2 c.37.1.14 SERINE PROTEASE/NTPASE/HELICASE NS3 & DNA
1093 1o4x 0.65 31.48 1.89 244 108 34 34 0 2 a.4.1.1;a.21.1.1;a.35.1.1 TRANSCRIPTION FACTOR OCT-1 & TRANSCRIPTION FACTOR SOX-2 & DNA & DNA
1094 3q5f 0.65 34.26 1.90 327 108 37 37 0 4 a.4.5.28 TRANSCRIPTIONAL REGULATOR SLYA & DNA & DNA
1095 1zzj 0.65 34.26 1.91 230 108 37 37 0 2 d.51.1.0 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K
1096 1zqn 0.65 34.26 1.93 341 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1097 3qqy 0.65 34.26 1.93 351 108 37 37 0 0 No_SCOP_id RIBOSOMAL PROTEIN 3/HOMING ENDONUCLEASE-LIKE PROTEIN FUSION & DNA (26-MER) & DNA (26-MER)
1098 3t72 0.65 32.41 1.93 3258 108 35 35 0 2 No_SCOP_id PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB & PHO BOX DNA (STRAND 1) & PHO BOX DNA (STRAND 2) & RNA POLYMERASE SIGMA FACTOR RPOD, DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA
1099 1bhm 0.65 33.33 1.96 429 108 36 36 0 3 c.52.1.3 DNA & PROTEIN (BAMHI (E.C.3.1.21.4))
1100 1mw8 0.65 34.26 1.96 567 108 37 37 0 3 e.10.1.1 DNA & DNA TOPOISOMERASE I
1101 3d0p 0.65 38.89 1.97 291 108 42 41 1 1 c.55.3.1 RIBONUCLEASE H & DNA
1102 3gpp 0.65 35.19 2.00 276 108 38 38 0 4 a.156.1.2;b.113.1.1;g.39.1.8 DNA GLYCOSYLASE & DNA & DNA
1103 2gkd 0.65 36.11 2.03 177 108 39 38 1 4 d.129.3.5 CALC & DNA & DNA
1104 2vy1 0.65 36.11 2.03 183 108 39 39 0 3 No_SCOP_id PROTEIN LEAFY & DNA
1105 3fbd 0.65 37.04 2.13 335 108 40 38 2 3 d.4.1.1 COLICIN-E7 & DNA
1106 3m7n 0.65 37.04 2.14 2058 108 40 38 2 3 d.14.1.4;d.101.1.1 PUTATIVE UNCHARACTERIZED PROTEIN AF_0206 & PROBABLE EXOSOME COMPLEX EXONUCLEASE 1 & PROBABLE EXOSOME COMPLEX EXONUCLEASE 2 & 5'-R(*C*UP*CP*CP*CP*C)-3'
1107 4a8m 0.65 39.81 2.18 1996 108 43 43 0 6 No_SCOP_id RNA-DIRECTED RNA POLYMERASE & DNA
1108 3oqo 0.65 41.67 2.19 869 108 45 44 1 2 No_SCOP_id CATABOLITE CONTROL PROTEIN A & PHOSPHOCARRIER PROTEIN HPR & DNA & DNA
1109 2kdq 0.65 23.81 1.05 42 108 10 10 0 1 No_SCOP_id L-22 CYCLIC PEPTIDE & HIV-1 TAR RNA
1110 2bop 0.64 32.35 1.95 102 108 33 32 1 1 d.58.8.1 DNA & PROTEIN (E2)
1111 3gna 0.63 32.29 1.80 96 108 31 26 5 2 No_SCOP_id V(D)J RECOMBINATION-ACTIVATING PROTEIN 1 & DNA & DNA
1112 3gnb 0.63 32.29 1.80 96 108 31 26 5 3 No_SCOP_id V(D)J RECOMBINATION-ACTIVATING PROTEIN 1 & DNA & DNA
1113 3epg 0.61 21.30 0.75 388 108 23 23 0 1 No_SCOP_id DNA POLYMERASE IOTA & DNA
1114 2voo 0.61 24.07 1.18 362 108 26 26 0 2 a.4.5.46;d.58.7.1 LUPUS LA PROTEIN & 5'-R(*UP*UP*UP*UP*UP*UP*UP)-3'
1115 3f73 0.61 24.07 1.25 1397 108 26 26 0 0 No_SCOP_id ARGONAUTE & DNA & RNA (5'- R(*UP*AP*UP*AP*CP*AP*A*CP*UP*CP*AP*CP*UP*AP*CP*CP*UP*CP*GP*U)-3')
1116 4gle 0.61 25.93 1.27 320 108 28 28 0 2 No_SCOP_id DNA & UV DAMAGE ENDONUCLEASE
1117 3u60 0.61 25.00 1.29 2159 108 27 27 0 2 No_SCOP_id DNA POLYMERASE ACCESSORY PROTEIN 44 & TEMPLATE DNA STRAND & PRIMER DNA STRAND & DNA POLYMERASE ACCESSORY PROTEIN 62 & DNA POLYMERASE PROCESSIVITY COMPONENT
1118 1xpx 0.61 25.93 1.33 164 108 28 28 0 5 a.4.1.1 DNA & PROTEIN PROSPERO
1119 3mr6 0.61 24.07 1.35 444 108 26 26 0 0 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1120 3mgr 0.61 26.85 1.39 1066 108 29 29 0 2 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & DNA (147-MER) & DNA (147-MER)
1121 3oda 0.61 27.78 1.43 780 108 30 30 0 2 No_SCOP_id POLY [ADP-RIBOSE] POLYMERASE 1 & DNA
1122 1pvr 0.61 26.85 1.46 710 108 29 29 0 3 a.60.9.1;d.163.1.1 34-MER & 34-MER & RECOMBINASE CRE
1123 1pvp 0.61 25.93 1.47 707 108 28 28 0 1 a.60.9.1;d.163.1.1 34-MER & 34-MER & RECOMBINASE CRE
1124 3oyh 0.61 25.00 1.48 588 108 27 27 0 1 No_SCOP_id PFV INTEGRASE & DNA & DNA
1125 3hot 0.61 27.78 1.51 832 108 30 30 0 3 No_SCOP_id TRANSPOSABLE ELEMENT MARINER, COMPLETE CDS & MOS1 NTS INVERTED REPEAT DNA & MOS1 TS INVERTED REPEAT DNA
1126 3s3n 0.61 27.78 1.56 585 108 30 30 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
1127 1drg 0.61 28.70 1.58 348 108 31 31 0 2 a.60.9.1;d.163.1.1 DNA & CRE RECOMBINASE
1128 4esj 0.61 27.78 1.60 519 108 30 30 0 2 No_SCOP_id TYPE-2 RESTRICTION ENZYME DPNI & DNA
1129 1j1u 0.61 26.85 1.61 373 108 29 29 0 1 c.26.1.1 TRNA(TYR) & TYROSYL-TRNA SYNTHETASE
1130 1d1u 0.61 29.63 1.63 271 108 32 32 0 0 e.8.1.2 DNA & PROTEIN (REVERSE TRANSCRIPTASE)
1131 1q3f 0.61 28.70 1.64 241 108 31 31 0 1 c.18.1.1 DNA & URACIL-DNA GLYCOSYLASE
1132 3b6f 0.61 30.56 1.64 1083 108 33 28 5 2 a.22.1.1 HISTONE H3.2 & HISTONE H4 & HISTONE H2A & HISTONE H2B 1.1 & 147-MER DNA & 147-MER DNA
1133 1r9f 0.61 30.56 1.65 155 108 33 32 1 2 d.255.1.1 5'- R(*CP*GP*UP*AP*CP*GP*CP*GP*GP*AP*AP*UP*AP*CP*UP*UP*CP*GP*AP *UP*U)-3' & 5'- R(*UP*CP*GP*AP*AP*GP*UP*AP*UP*UP*CP*CP*GP*CP*GP*UP*AP*CP*GP *UP*U)-3' & CORE PROTEIN P19
1134 1rio 0.61 29.63 1.66 302 108 32 31 1 4 a.4.13.2;a.35.1.2 27-MER & 27-MER & SIGMA FACTOR SIGA & REPRESSOR PROTEIN CI
1135 1jgg 0.61 29.63 1.69 134 108 32 32 0 2 a.4.1.1 DNA & SEGMENTATION PROTEIN EVEN-SKIPPED
1136 2du4 0.61 30.56 1.69 1002 108 33 33 0 3 No_SCOP_id TRNA & O-PHOSPHOSERYL-TRNA SYNTHETASE
1137 3v6t 0.61 29.63 1.72 1046 108 32 32 0 4 No_SCOP_id DHAX3 & DNA & DNA
1138 1vrl 0.61 29.63 1.77 365 108 32 31 1 2 a.96.1.2;d.113.1.3 DNA & MUTY
1139 3dlh 0.61 30.56 1.77 1367 108 33 33 0 1 No_SCOP_id ARGONAUTE & DNA
1140 2ivk 0.61 31.48 1.78 938 108 34 34 0 1 d.4.1.6 ENDONUCLEASE I & DNA & DNA & DNA
1141 2zh8 0.61 31.48 1.78 471 108 34 34 0 3 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (34-MER)
1142 1v15 0.61 33.33 1.79 560 108 36 35 1 4 d.4.1.1 COLICIN E9 & DNA
1143 1apl 0.61 32.41 1.80 159 108 35 35 0 4 a.4.1.1 DNA & PROTEIN (MAT-ALPHA2 HOMEODOMAIN)
1144 2zhb 0.61 32.41 1.81 470 108 35 32 3 3 a.160.1.0;d.58.16.2;d.218.1.0 CCA-ADDING ENZYME & TRNA (34-MER)
1145 1n78 0.61 29.63 1.83 1086 108 32 30 2 1 a.97.1.1;c.26.1.1 TRNA(GLU) & GLUTAMYL-TRNA SYNTHETASE
1146 3ere 0.61 31.48 1.83 188 108 34 28 6 4 No_SCOP_id ARGININE REPRESSOR & DNA & DNA
1147 2pfp 0.61 34.26 1.84 347 108 37 37 0 4 a.60.6.1;a.60.12.1;d.218.1.2 TEMPLATE & PRIMER & DOWNSTREAM PRIMER & DNA POLYMERASE LAMBDA
1148 3ra0 0.61 31.48 1.84 170 108 34 33 1 2 d.18.1.0 WHY2 PROTEIN & DNA 32-MER DT32
1149 4be2 0.61 31.48 1.89 588 108 34 34 0 3 No_SCOP_id PFV INTEGRASE & 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND) & 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND) *AP*CP*A)-3'
1150 3rn2 0.61 33.33 1.90 427 108 36 33 3 4 b.40.16.0 INTERFERON-INDUCIBLE PROTEIN AIM2 & DNA
1151 1mwi 0.61 32.41 1.91 176 108 35 34 1 2 c.18.1.2 DNA & G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE
1152 1yyw 0.61 33.33 1.92 971 108 36 36 0 2 a.149.1.1;d.50.1.1 5'-R(*AP*AP*AP*UP*AP*UP*AP*UP*AP*UP*UP*U)-3' & RIBONUCLEASE III
1153 1esg 0.61 33.33 1.94 437 108 36 36 0 2 c.52.1.3 DNA & TYPE II RESTRICTION ENZYME BAMHI
1154 1z63 0.61 34.26 1.94 994 108 37 37 0 4 c.37.1.19 DNA & HELICASE OF THE SNF2/RAD54 FAMILY
1155 1pyi 0.61 34.26 1.95 186 108 37 37 0 6 g.38.1.1;h.1.3.1 DNA & PROTEIN (PYRIMIDINE PATHWAY REGULATOR 1)
1156 1e3o 0.61 33.33 1.96 154 108 36 36 0 2 a.4.1.1;a.35.1.1 OCTAMER-BINDING TRANSCRIPTION FACTOR 1 & DNA & DNA
1157 1zrc 0.61 34.26 2.00 476 108 37 37 0 0 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR
1158 2f5n 0.61 35.19 2.00 279 108 38 38 0 4 No_SCOP_id DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSIDASE
1159 3hwt 0.61 35.19 2.01 340 108 38 38 0 2 No_SCOP_id DNA POLYMERASE LAMBDA & DNA & DNA & DNA
1160 3kqu 0.61 35.19 2.01 2658 108 38 38 0 2 c.37.1.14 SERINE PROTEASE/NTPASE/HELICASE NS3 & DNA
1161 3crx 0.61 35.19 2.08 784 108 38 38 0 4 a.60.9.1;d.163.1.1 DNA 35-MER & DNA 35-MER & DNA 35-MER & DNA 35-MER & CRE RECOMBINASE
1162 3gij 0.61 36.11 2.08 736 108 39 39 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1163 2dra 0.61 37.96 2.09 471 108 41 41 0 2 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (34-MER) & CCA-ADDING ENZYME
1164 3pw7 0.61 37.04 2.09 740 108 40 40 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1165 1v14 0.61 37.04 2.11 582 108 40 40 0 2 d.4.1.1 COLICIN E9 & DNA
1166 1rg1 0.61 39.81 2.12 859 108 43 43 0 0 d.136.1.3 DNA & TYROSYL-DNA PHOSPHODIESTERASE 1
1167 1c9b 0.61 39.81 2.14 2115 108 43 31 12 4 a.74.1.2;d.129.1.1 ADMLP TATA-BOX DNA CONTAINING IIB RECOGNITION ELEMENT & ADMLP TATA-BOX DNA CONTAINING IIB RECOGNITION ELEMENT & GENERAL TRANSCRIPTION FACTOR IIB & TATA BOX BINDING PROTEIN
1168 2w8l 0.61 36.11 2.20 370 108 39 39 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1169 1ca6 0.61 25.61 1.48 82 108 21 21 0 3 b.34.13.1 DNA & CHROMOSOMAL PROTEIN SAC7D
1170 1jkr 0.60 20.27 0.62 74 108 15 15 0 3 a.4.1.2 DNA & DNA-INVERTASE HIN
1171 3ssd 0.57 21.30 0.89 326 108 23 23 0 1 No_SCOP_id 5-METHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME B & DNA & DNA
1172 2aq4 0.57 22.22 1.10 455 108 24 24 0 0 No_SCOP_id DNA & DNA REPAIR PROTEIN REV1
1173 4e7h 0.57 23.15 1.11 590 108 25 25 0 0 No_SCOP_id PRO-POL POLYPROTEIN & DNA & DNA
1174 2a0i 0.57 23.15 1.14 303 108 25 25 0 1 No_SCOP_id F PLASMID SINGLE-STRANDED ORIT DNA & TRAI PROTEIN
1175 1dmu 0.57 23.15 1.17 316 108 25 25 0 3 c.52.1.4 DNA & BGLI RESTRICTION ENDONUCLEASE
1176 1hw2 0.57 26.85 1.36 482 108 29 29 0 0 a.4.5.6;a.78.1.1 DNA & FATTY ACID METABOLISM REGULATOR PROTEIN
1177 1rc8 0.57 25.00 1.36 280 108 27 27 0 1 c.37.1.1;c.108.1.9 DNA & POLYNUCLEOTIDE KINASE
1178 3rkq 0.57 26.85 1.38 153 108 29 29 0 2 a.4.1.1 HOMEOBOX PROTEIN NKX-2.5 & ANF-242 DNA & ANF-242 DNA
1179 1m19 0.57 26.85 1.40 1055 108 29 29 0 2 a.22.1.1 PALINDROMIC 146 BASE PAIR DNA FRAGMENT & HISTONE H3.2 & HISTONE H4 & HISTONE H2A.1 & HISTONE H2B.1
1180 3n1l 0.57 25.00 1.42 170 108 27 27 0 1 d.18.1.0 PROTEIN STWHY2 & DNA 32-MER RCERE32
1181 2fkh 0.57 26.85 1.44 267 108 29 29 0 1 No_SCOP_id DNA & R.HINP1I RESTRICTION ENDONUCLEAS
1182 1owg 0.57 27.78 1.50 260 108 30 30 0 3 a.55.1.1 PHAGE LAMBDA H' SITE & DNA & DNA & INTEGRATION HOST FACTOR ALPHA-SUBUNIT & INTEGRATION HOST FACTOR BETA-SUBUNIT
1183 3gik 0.57 28.70 1.53 370 108 31 31 0 3 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1184 1lli 0.57 28.70 1.56 221 108 31 31 0 1 a.35.1.2 DNA & PROTEIN (LAMBDA REPRESSOR)
1185 1emh 0.57 28.70 1.62 241 108 31 31 0 2 c.18.1.1 DNA & URACIL-DNA GLYCOSYLASE
1186 1rlg 0.57 27.78 1.62 274 108 30 30 0 2 d.79.3.1 25-MER & 50S RIBOSOMAL PROTEIN L7AE
1187 4gjr 0.57 28.70 1.62 1038 108 31 31 0 4 No_SCOP_id HAX3 & DNA & DNA
1188 2bcq 0.57 26.85 1.63 347 108 29 29 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
1189 3vok 0.57 28.70 1.64 191 108 31 31 0 4 No_SCOP_id TRANSCRIPTIONAL REGULATOR & DNA
1190 2er8 0.57 31.48 1.66 315 108 34 34 0 2 No_SCOP_id DNA & REGULATORY PROTEIN LEU3
1191 3n1k 0.57 26.85 1.68 170 108 29 29 0 1 d.18.1.0 PROTEIN STWHY2 & DNA 32-MER CERE32
1192 3raq 0.57 30.56 1.68 739 108 33 33 0 3 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1193 2ht0 0.57 30.56 1.71 259 108 33 33 0 3 a.55.1.1 DNA & INTEGRATION HOST FACTOR BETA-SUBUNIT
1194 2uz4 0.57 30.56 1.72 351 108 33 33 0 4 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1195 3cwa 0.57 29.63 1.72 1174 108 32 32 0 2 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
1196 3ola 0.57 29.63 1.72 1986 108 32 32 0 1 e.8.1.4 POLYMERASE & RNA (5'- R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP* GP*AP*AP*A)-3') & DNA/RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)- D(P*C)-3') & RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') & RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3')
1197 3oy9 0.57 29.63 1.74 588 108 32 32 0 5 No_SCOP_id PFV INTEGRASE & DNA & DNA
1198 7ics 0.57 30.56 1.74 339 108 33 33 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1199 1g9y 0.57 28.70 1.76 352 108 31 30 1 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1200 1t9j 0.57 30.56 1.76 350 108 33 33 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1201 2xsd 0.57 29.63 1.76 149 108 32 32 0 3 a.4.1.0;a.35.1.0 DNA & POU DOMAIN, CLASS 3, TRANSCRIPTION FACTOR 1
1202 3kna 0.57 29.63 1.76 488 108 32 32 0 4 e.8.1.4 3D POLYMERASE & RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3') & RNA (5'-R(*GP*GP*CP*CP*C)-3')
1203 3cwu 0.57 28.70 1.77 1174 108 31 30 1 1 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
1204 3dnv 0.57 31.48 1.78 504 108 34 32 2 2 No_SCOP_id PROTEIN HIPA & HTH-TYPE TRANSCRIPTIONAL REGULATOR HIPB & DNA
1205 2vjv 0.57 29.63 1.79 314 108 32 32 0 4 d.58.57.1 TRANSPOSASE ORFA & DNA & DNA
1206 3ikt 0.57 31.48 1.79 454 108 34 34 0 2 No_SCOP_id REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX & REX OPERATOR DNA
1207 1fzp 0.57 31.48 1.80 219 108 34 34 0 1 a.4.5.28 DNA & STAPHYLOCOCCAL ACCESSORY REGULATOR A
1208 3hdd 0.57 29.63 1.84 153 108 32 32 0 4 a.4.1.1 DNA & ENGRAILED HOMEODOMAIN
1209 2rd2 0.57 31.48 1.85 603 108 34 34 0 2 b.53.1.2;c.26.1.1 GLUTAMINYL-TRNA SYNTHETASE & GLUTAMINE TRNA
1210 2z6a 0.57 33.33 1.85 352 108 36 36 0 3 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1211 2bnw 0.57 32.41 1.87 272 108 35 34 1 0 a.43.1.4 ORF OMEGA & DNA & DNA
1212 1bgb 0.57 33.33 1.89 486 108 36 36 0 3 c.52.1.2 DNA & ECORV ENDONUCLEASE
1213 1ecr 0.57 34.26 1.90 335 108 37 37 0 2 e.2.1.1 DNA & PROTEIN (REPLICATION-TERMINATOR PROTEIN)
1214 2c2r 0.57 34.26 1.90 369 108 37 37 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1215 2c7p 0.57 34.26 1.91 349 108 37 37 0 4 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1216 1qn3 0.57 33.33 2.00 426 108 36 36 0 3 d.129.1.1 TRANSCRIPTION INITIATION FACTOR TFIID-1 & DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*CP*GP*GP*GP*CP*A)-3') & DNA (5'-D(*TP*GP*CP*CP*CP*GP*TP*TP*TP*AP*TP*AP*GP*C)-3')
1217 2bcr 0.57 35.19 2.00 348 108 38 38 0 3 a.60.6.0;a.60.12.0;d.218.1.2 DNA & DNA POLYMERASE LAMBDA
1218 1dfm 0.57 34.26 2.01 463 108 37 36 1 0 c.52.1.5 DNA & ENDONUCLEASE BGLII
1219 2oa8 0.57 35.19 2.08 450 108 38 38 0 2 c.55.3.0 DNA & THREE PRIME REPAIR EXONUCLEASE 1
1220 2r8j 0.57 38.89 2.12 1060 108 42 42 0 3 d.240.1.0;e.8.1.7 DNA POLYMERASE ETA & DNA & DNA
1221 3rbd 0.57 38.89 2.15 732 108 42 40 2 1 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1222 1z9c 0.57 38.89 2.16 995 108 42 42 0 4 a.4.5.28 DNA (29-MER) & DNA (29-MER) & ORGANIC HYDROPEROXIDE RESISTANCE TRANSCRIPTIONAL REGULATOR
1223 1qp4 0.57 40.74 2.17 355 108 44 44 0 3 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
1224 1rrq 0.57 38.89 2.17 364 108 42 42 0 3 a.96.1.2;d.113.1.3 DNA & MUTY
1225 1qp0 0.57 40.74 2.22 355 108 44 44 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
1226 3pml 0.57 43.52 2.23 688 108 47 47 0 4 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
1227 1rfi 0.57 41.67 2.28 868 108 45 45 0 0 d.136.1.3 DNA & TOPOISOMERASE I-DERIVED PEPTIDE
1228 1j9n 0.56 20.00 0.09 15 108 3 3 0 1 No_SCOP_id DNA & PEPTIDE ACE-LYS-TRP-LYS-HSE-ALA
1229 1jkp 0.56 20.00 0.43 75 108 15 15 0 2 a.4.1.2 DNA & DNA-INVERTASE HIN
1230 1fyk 0.56 31.11 1.82 90 108 28 27 1 2 a.4.5.22 HSE DNA-PHOSPHATE BACKBONE & HEAT SHOCK FACTOR PROTEIN
1231 1vfc 0.54 28.09 1.62 89 108 25 18 7 3 a.4.1.4 TELOMERIC REPEAT BINDING FACTOR 2 & SHORT G-RICH STRAND & SHORT C-RICH STARND
1232 1ijw 0.54 20.27 0.72 74 108 15 15 0 0 a.4.1.2 DNA & DNA-INVERTASE HIN
1233 1jkq 0.54 20.27 0.80 74 108 15 15 0 0 a.4.1.2 DNA & DNA-INVERTASE HIN
1234 2o9l 0.53 29.67 1.78 91 108 27 27 0 0 No_SCOP_id RNA POLYMERASE SIGMA FACTOR RPON & DNA & DNA
1235 2nue 0.53 21.30 0.83 486 108 23 23 0 1 a.149.1.1;d.50.1.1 46-MER & RIBONUCLEASE III
1236 3ssc 0.53 21.30 0.84 330 108 23 23 0 1 No_SCOP_id 5-METHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME B & DNA & DNA
1237 4skn 0.53 23.15 1.04 242 108 25 25 0 1 c.18.1.1 DNA & PROTEIN (URACIL-DNA GLYCOSYLASE)
1238 1ooa 0.53 23.15 1.06 684 108 25 25 0 3 b.1.18.1;b.2.5.3 RNA APTAMER & NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT
1239 2r9l 0.53 22.22 1.09 603 108 24 24 0 1 No_SCOP_id PUTATIVE DNA LIGASE-LIKE PROTEIN & DNA & DNA & DNA
1240 3g6x 0.53 23.15 1.17 386 108 25 25 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & PRIMER DNA STRAND & TEMPLATE DNA STRAND
1241 1ssp 0.53 24.07 1.27 243 108 26 26 0 1 c.18.1.1 DNA & URACIL-DNA GLYCOSYLASE
1242 3dzy 0.53 25.00 1.29 715 108 27 27 0 4 No_SCOP_id RETINOIC ACID RECEPTOR RXR-ALPHA & PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA & DNA & DNA & NCOA2 PEPTIDE
1243 1u63 0.53 25.93 1.40 514 108 28 28 0 3 e.24.1.1 49 NT FRAGMENT OF MRNA FOR L1 & 50S RIBOSOMAL PROTEIN L1P
1244 1zqf 0.53 24.07 1.40 341 108 26 26 0 3 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1245 1zqh 0.53 25.93 1.42 341 108 28 28 0 1 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1246 3qrq 0.53 24.07 1.42 223 108 26 26 0 0 No_SCOP_id PUTATIVE UNCHARACTERIZED PROTEIN TTHB192 & RNA (5'- R(*GP*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP*GP*GP*GP*A)-3')
1247 2dr9 0.53 25.93 1.48 471 108 28 28 0 0 a.160.1.3;d.58.16.2;d.218.1.7 TRNA (34-MER) & CCA-ADDING ENZYME
1248 3mzh 0.53 25.93 1.49 491 108 28 28 0 1 a.4.5.0;b.82.3.0 PROBABLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY CRP/FNR-FAMILY) & DNA & DNA
1249 2vih 0.53 25.93 1.51 331 108 28 26 2 2 d.58.57.1 TRANSPOSASE ORFA & DNA
1250 2zha 0.53 26.85 1.55 470 108 29 29 0 2 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (33-MER)
1251 3jso 0.53 26.85 1.58 421 108 29 29 0 0 a.4.5.0;b.87.1.1 LEXA REPRESSOR & DNA
1252 1ckq 0.53 27.78 1.63 274 108 30 29 1 4 c.52.1.1 DNA & PROTEIN (ENDONUCLEASE)
1253 2zh7 0.53 28.70 1.69 469 108 31 30 1 2 a.160.1.0;d.58.16.2;d.218.1.0 CCA-ADDING ENZYME & TRNA (33-MER)
1254 3bep 0.53 29.63 1.69 756 108 32 32 0 1 d.131.1.1 DNA POLYMERASE III SUBUNIT BETA & DNA & DNA
1255 1du0 0.53 29.63 1.70 151 108 32 32 0 3 a.4.1.1 DNA & ENGRAILED HOMEODOMAIN
1256 3ket 0.53 30.56 1.72 226 108 33 33 0 4 No_SCOP_id REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX & DNA & DNA
1257 3n97 0.53 29.63 1.74 295 108 32 25 7 7 No_SCOP_id RNA POLYMERASE SIGMA FACTOR & DNA-DIRECTED RNA POLYMERASE SUBUNIT ALPHA & DNA & DNA
1258 3hqg 0.53 31.48 1.75 246 108 34 34 0 1 No_SCOP_id TYPE-2 RESTRICTION ENZYME ECORII & DNA & DNA
1259 3mva 0.53 29.63 1.75 368 108 32 32 0 1 No_SCOP_id TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL & DNA & DNA
1260 4aab 0.53 30.56 1.75 352 108 33 33 0 2 No_SCOP_id DNA ENDONUCLEASE I-CREI & 14MER DNA 5'-D(*TP*CP*AP*AP*AP*AP*CP*GP*TP*CP*GP*TP*AP*CP)-3' & 10MER DNA 5'-D(*GP*AP*CP*GP*TP*TP*TP*TP*GP*AP)-3'
1261 2is2 0.53 29.63 1.77 1350 108 32 30 2 2 No_SCOP_id 33-MER & DNA HELICASE II
1262 2c7r 0.53 30.56 1.78 349 108 33 30 3 2 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1263 1j1v 0.53 30.56 1.80 118 108 33 32 1 4 a.4.12.2 DNA & CHROMOSOMAL REPLICATION INITIATOR PROTEIN DNAA
1264 1yyo 0.53 29.63 1.83 487 108 32 32 0 2 a.149.1.1;d.50.1.1 5'-R(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3' & RIBONUCLEASE III
1265 2vs7 0.53 34.26 1.90 697 108 37 34 3 3 No_SCOP_id HOMING ENDONUCLEASE I-DMOI & DNA & DNA
1266 3kql 0.53 32.41 1.91 886 108 35 35 0 4 c.37.1.14 SERINE PROTEASE/NTPASE/HELICASE NS3 & DNA
1267 2e1c 0.53 35.19 1.93 181 108 38 34 4 2 a.4.5.32;d.58.4.2 PUTATIVE HTH-TYPE TRANSCRIPTIONAL REGULATOR PH1519 & DNA & DNA
1268 1xhz 0.53 31.48 1.94 2301 108 34 34 0 2 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
1269 1gji 0.53 33.33 1.95 590 108 36 35 1 2 b.1.18.1;b.2.5.3 IL-2 CD28RE DNA & IL-2 CD28RE DNA & C-REL PROTO-ONCOGENE PROTEIN
1270 3nh1 0.53 34.26 1.99 842 108 37 37 0 4 c.55.3.5 RIBONUCLEASE T & DNA
1271 4gg4 0.53 33.33 1.99 521 108 36 35 1 2 No_SCOP_id HAX3 & DNA & RNA (5'- R(*AP*GP*AP*GP*AP*GP*AP*UP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3')
1272 2jef 0.53 33.33 2.02 370 108 36 36 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1273 3q05 0.53 33.33 2.02 988 108 36 35 1 0 No_SCOP_id CELLULAR TUMOR ANTIGEN P53 & DNA (26-MER) & DNA (26-MER)
1274 3szq 0.53 32.41 2.03 212 108 35 35 0 2 No_SCOP_id APRATAXIN-LIKE PROTEIN & DNA & DNA
1275 3ugm 0.53 37.96 2.06 930 108 41 41 0 3 No_SCOP_id TAL EFFECTOR AVRBS3/PTHA & DNA-1 & DNA-2
1276 3qym 0.53 37.96 2.07 1625 108 41 41 0 3 No_SCOP_id TUMOR PROTEIN 63 & DNA
1277 1zay 0.53 38.89 2.18 354 108 42 42 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
1278 1qp7 0.53 40.74 2.19 355 108 44 44 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
1279 3r7p 0.53 37.96 2.21 346 108 41 40 1 4 No_SCOP_id RIBOSOMAL PROTEIN 3/HOMING ENDONUCLEASE-LIKE FUSION PROTEIN & DNA & DNA & DNA & DNA
1280 4ass 0.53 37.96 2.21 862 108 41 41 0 2 No_SCOP_id TUBR FROM BACILLUS THURINGIENSIS PBTOXIS & TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 26 BP & TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 26 BP
1281 1wtb 0.52 32.53 2.02 83 108 27 27 0 2 d.58.7.1 HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN D0 & DNA
1282 2zkd 0.49 22.22 0.97 465 108 24 24 0 2 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
1283 3gv7 0.49 23.15 1.16 393 108 25 25 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & DNA & DNA
1284 2cdm 0.49 23.15 1.17 599 108 25 25 0 1 No_SCOP_id TRWC & DNA
1285 3gv8 0.49 23.15 1.17 390 108 25 25 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & DNA & DNA
1286 3h4d 0.49 23.15 1.17 387 108 25 25 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & DNA & DNA
1287 3g6v 0.49 23.15 1.18 387 108 25 25 0 1 No_SCOP_id DNA POLYMERASE IOTA & PRIMER DNA STRAND & TEMPLATE DNA STRAND
1288 3osn 0.49 23.15 1.18 398 108 25 25 0 1 No_SCOP_id DNA & DNA POLYMERASE IOTA
1289 4enj 0.49 23.15 1.21 133 108 25 25 0 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
1290 1xc8 0.49 24.07 1.23 298 108 26 26 0 1 a.156.1.2;b.113.1.1;g.39.1.8 DNA & FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
1291 3l2v 0.49 23.15 1.25 564 108 25 25 0 1 No_SCOP_id INTEGRASE & DNA & DNA
1292 3kms 0.49 25.00 1.27 488 108 27 27 0 2 e.8.1.4 3D POLYMERASE & RNA (5'-R(*AP*UP*GP*GP*GP*CP*C)-3') & RNA (5'-R(*GP*GP*CP*CP*C)-3')
1293 1q0t 0.49 23.15 1.32 506 108 25 25 0 0 c.66.1.28 DNA & DNA ADENINE METHYLASE
1294 1p3p 0.49 25.93 1.34 1059 108 28 28 0 2 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
1295 1zbb 0.49 25.93 1.35 2282 108 28 28 0 2 a.22.1.1 DNA STRAND 1 (ARBITRARY MODEL SEQUENCE) & DNA STRAND 2 (ARBITRARY MODEL SEQUENCE) & HISTONE H3 & HISTONE H4 & HISTONE H2A.1 & HISTONE H2B.1
1296 1kb6 0.49 26.85 1.50 231 108 29 29 0 1 g.39.1.2 DNA & VITAMIN D3 RECEPTOR
1297 3l2r 0.49 25.93 1.53 564 108 28 28 0 1 No_SCOP_id INTEGRASE & DNA & DNA
1298 1p3g 0.49 27.78 1.54 1051 108 30 30 0 2 a.22.1.1 PALINDROMIC 146BP HUMAN ALPHA-SATELLITE DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A & HISTONE H2B
1299 1l9a 0.49 27.78 1.58 212 108 30 26 4 3 d.201.1.1 SIGNAL RECOGNITION PARTICLE RNA S DOMAIN & SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN
1300 1lwy 0.49 26.85 1.58 343 108 29 29 0 3 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE
1301 1bl0 0.49 26.85 1.65 164 108 29 29 0 0 a.4.1.8 DNA & PROTEIN (MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN)
1302 1p78 0.49 28.70 1.66 224 108 31 31 0 1 a.55.1.1 DNA & DNA-BINDING PROTEIN HU
1303 1qps 0.49 26.85 1.66 274 108 29 28 1 0 c.52.1.1 DNA & ENDONUCLEASE ECORI
1304 3knt 0.49 27.78 1.66 934 108 30 30 0 1 No_SCOP_id N-GLYCOSYLASE/DNA LYASE & DNA & DNA
1305 3il2 0.49 29.63 1.74 442 108 32 32 0 1 No_SCOP_id REDOX-SENSING TRANSCRIPTIONAL REPRESSOR REX & REX OPERATOR DNA
1306 2du5 0.49 29.63 1.75 1070 108 32 32 0 1 No_SCOP_id TRNA & O-PHOSPHOSERYL-TRNA SYNTHETASE
1307 1diz 0.49 29.63 1.77 614 108 32 32 0 3 a.96.1.3;d.129.1.2 DNA & 3-METHYLADENINE DNA GLYCOSYLASE II
1308 2xe0 0.49 30.56 1.77 352 108 33 33 0 2 d.95.2.1 I-CREI V2V3 VARIANT & I-CREI V2V3 VARIANT & 24MER DNA & 24MER DNA
1309 1m3q 0.49 30.56 1.79 343 108 33 27 6 2 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE
1310 1a3q 0.49 30.56 1.82 592 108 33 31 2 4 b.1.18.1;b.2.5.3 DNA & PROTEIN (NUCLEAR FACTOR KAPPA-B P52)
1311 2cv0 0.49 29.63 1.83 1086 108 32 30 2 1 a.97.1.1;c.26.1.1 TRNA & GLUTAMYL-TRNA SYNTHETASE
1312 1ebm 0.49 30.56 1.84 343 108 33 27 6 2 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE
1313 1o0c 0.49 30.56 1.85 603 108 33 33 0 2 b.53.1.2;c.26.1.1 GLUTAMINYL TRNA & GLUTAMINYL-TRNA SYNTHETASE
1314 2c06 0.49 31.48 1.85 225 108 34 34 0 2 b.34.6.2 KID TOXIN PROTEIN & 5'-R(*AP*UP*AP*CP*AP)-3'
1315 1k78 0.49 31.48 1.86 619 108 34 31 3 2 a.4.1.5;a.4.5.21 PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER & PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER & PAIRED BOX PROTEIN PAX5 & C-ETS-1 PROTEIN
1316 2c7q 0.49 33.33 1.87 350 108 36 36 0 4 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1317 1mht 0.49 32.41 1.90 350 108 35 35 0 4 c.66.1.26 DNA & PROTEIN (HHAI METHYLTRANSFERASE)
1318 1t9i 0.49 30.56 1.90 356 108 33 33 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1319 1jey 0.49 29.63 1.91 1072 108 32 32 0 0 b.131.1.1;b.131.1.2;c.62.1.3;c.62.1.4 DNA & KU80
1320 1cqt 0.49 32.41 1.97 366 108 35 35 0 3 a.4.1.1;a.35.1.1 DNA & POU DOMAIN, CLASS 2, ASSOCIATING FACTOR 1
1321 4e7l 0.49 32.41 1.97 580 108 35 35 0 3 No_SCOP_id PRO-POL POLYPROTEIN & DNA & DNA & DNA & DNA
1322 2xpj 0.49 34.26 1.99 533 108 37 37 0 4 No_SCOP_id COAT PROTEIN & 5'-R(CP*CP*CP)-3'
1323 3pw0 0.49 34.26 1.99 368 108 37 37 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1324 4fx4 0.49 35.19 2.05 302 108 38 38 0 4 No_SCOP_id DNA & PROBABLE TRANSCRIPTIONAL REPRESSOR PROTEIN
1325 1x9w 0.49 37.04 2.07 799 108 40 40 0 0 c.47.1.1;c.55.3.5;e.8.1.1 DNA & THIOREDOXIN 1
1326 2xc9 0.49 35.19 2.09 370 108 38 38 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1327 1tf6 0.49 37.96 2.13 485 108 41 41 0 4 g.37.1.1 DNA & PROTEIN (TRANSCRIPTION FACTOR IIIA)
1328 2wwy 0.49 40.74 2.29 1128 108 44 44 0 1 No_SCOP_id ATP-DEPENDENT DNA HELICASE Q1 & DNA OLIGO (27BP) & DNA
1329 2ezd 0.47 28.89 1.75 45 108 13 13 0 0 j.10.1.1 DNA & HIGH MOBILITY GROUP PROTEIN HMG-I/HMG-Y
1330 3l2u 0.45 20.37 0.84 564 108 22 22 0 5 No_SCOP_id INTEGRASE & DNA & DNA
1331 1trr 0.45 22.22 1.10 896 108 24 24 0 1 a.4.12.1 DNA & PROTEIN (TRP REPRESSOR)
1332 4dl2 0.45 22.22 1.13 447 108 24 24 0 0 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1333 3h40 0.45 23.15 1.19 386 108 25 25 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & DNA & DNA
1334 3qoq 0.45 22.22 1.26 219 108 24 24 0 1 No_SCOP_id ALGINATE AND MOTILITY REGULATOR Z & DNA & DNA
1335 4er8 0.45 23.15 1.29 197 108 25 25 0 2 No_SCOP_id TNPAREP FOR PROTEIN & DNA (32-MER)
1336 3pov 0.45 25.00 1.47 483 108 27 26 1 1 No_SCOP_id ORF 37 & DNA & DNA
1337 2nol 0.45 25.93 1.49 343 108 28 28 0 3 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1338 3ri4 0.45 25.93 1.49 336 108 28 28 0 1 a.4.5.21 PROTEIN C-ETS-1 & TCR ALPHA PROMOTER DNA & TCR ALPHA PROMOTER DNA
1339 4g92 0.45 25.93 1.52 320 108 28 28 0 2 a.22.1.3 HAPB PROTEIN & TRANSCRIPTION FACTOR HAPC (EUROFUNG) & HAPE & DNA & DNA
1340 1j59 0.45 27.78 1.59 458 108 30 30 0 2 a.4.5.4;b.82.3.2 DNA & CATABOLITE GENE ACTIVATOR PROTEIN (CAP)
1341 2v2t 0.45 25.93 1.60 614 108 28 28 0 2 b.1.18.0;b.2.5.3;b.2.5.0 TRANSCRIPTION FACTOR RELB & NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT & DNA
1342 3oya 0.45 25.93 1.60 588 108 28 28 0 1 No_SCOP_id PFV INTEGRASE & DNA & DNA
1343 3pnc 0.45 27.78 1.62 337 108 30 30 0 1 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
1344 2xqc 0.45 27.78 1.63 327 108 30 30 0 3 No_SCOP_id TRANSPOSASE & DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE & DNA
1345 1ztw 0.45 26.85 1.64 271 108 29 29 0 3 e.8.1.2 CTTAATTC & GAATTAAG & REVERSE TRANSCRIPTASE
1346 1u3e 0.45 27.78 1.68 246 108 30 27 3 3 d.4.1.3;d.285.1.1 36-MER & DNA & DNA & HNH HOMING ENDONUCLEASE
1347 3iv5 0.45 27.78 1.68 243 108 30 29 1 3 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1348 3qrf 0.45 26.85 1.70 984 108 29 28 1 2 a.4.5.14 NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2 & FORKHEAD BOX PROTEIN P3 & HUMAN HARRE2 DNA (PLUS STRAND) & HUMAN HARRE2 DNA (MINUS STRAND)
1349 1zg5 0.45 26.85 1.71 333 108 29 27 2 0 a.4.6.2 DNA & NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
1350 3coq 0.45 29.63 1.71 218 108 32 31 1 1 g.38.1.1;h.1.3.1 REGULATORY PROTEIN GAL4 & DNA & DNA
1351 3jxb 0.45 29.63 1.73 172 108 32 32 0 1 a.35.1.2 DNA & REPRESSOR PROTEIN C2
1352 1au7 0.45 28.70 1.74 307 108 31 31 0 2 a.4.1.1;a.35.1.1 CONSENSUS DNA 25-MER & DNA & PROTEIN PIT-1
1353 1bdv 0.45 29.63 1.74 236 108 32 28 4 4 a.43.1.1 DNA & PROTEIN (ARC FV10 REPRESSOR)
1354 3osf 0.45 29.63 1.75 258 108 32 32 0 1 a.4.1.0 MYB21 & DNA & DNA
1355 1n4l 0.45 27.78 1.76 287 108 30 30 0 3 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
1356 2y8w 0.45 26.85 1.79 234 108 29 28 1 1 d.58.53.1;d.58.53.0 CSE3 & 5'-R(*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP *GP*GP*DGP*AP*UP*G)-3'
1357 3ey1 0.45 30.56 1.83 147 108 33 33 0 2 c.55.3.1 RIBONUCLEASE H & DNA
1358 2re8 0.45 30.56 1.84 603 108 33 33 0 2 b.53.1.2;c.26.1.1 GLUTAMINYL-TRNA SYNTHETASE & GLUTAMINE TRNA
1359 3amt 0.45 27.78 1.84 483 108 30 30 0 3 No_SCOP_id PUTATIVE UNCHARACTERIZED PROTEIN & RNA (78-MER)
1360 3n1j 0.45 30.56 1.84 170 108 33 32 1 2 d.18.1.0 PROTEIN STWHY2 & DNA 32-MER DT32
1361 2c7o 0.45 30.56 1.85 350 108 33 31 2 1 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1362 2fk6 0.45 28.70 1.86 360 108 31 31 0 3 d.157.1.7 TRNA(THR) & RIBONUCLEASE Z
1363 3do7 0.45 31.48 1.86 621 108 34 32 2 3 b.1.18.0;b.2.5.3 AVIAN RETICULOENDOTHELIOSIS VIRAL (V-REL) ONCOGENE RELATED B & NUCLEAR FACTOR NF-KAPPA-B P100 SUBUNIT & DNA
1364 3ko2 0.45 30.56 1.86 740 108 33 32 1 2 No_SCOP_id SITE-SPECIFIC DNA ENDONUCLEASE I-MSOI & DNA & DNA
1365 2vbn 0.45 29.63 1.87 353 108 32 32 0 2 d.95.2.1 DNA ENDONUCLEASE I-CREI & DNA ENDONUCLEASE I-CREI & DNA & DNA & DNA & DNA
1366 2vbo 0.45 29.63 1.87 353 108 32 32 0 2 d.95.2.1 DNA ENDONUCLEASE I-CREI & DNA ENDONUCLEASE I-CREI & DNA & DNA
1367 1t39 0.45 28.70 1.88 349 108 31 31 0 2 a.4.2.1;c.55.7.1 DNA & METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
1368 1ytf 0.45 31.48 1.88 404 108 34 34 0 2 a.32.1.1;b.56.1.1;d.129.1.1 DNA & PROTEIN (TRANSCRIPTION FACTOR IIA - TOA2 SUBUNIT)
1369 3b0v 0.45 29.63 1.89 754 108 32 32 0 2 No_SCOP_id TRNA & TRNA-DIHYDROURIDINE SYNTHASE
1370 2uyh 0.45 30.56 1.90 351 108 33 30 3 1 c.66.1.26 MODIFICATION METHYLASE HHAI & DNA & DNA
1371 2vbj 0.45 29.63 1.90 352 108 32 32 0 2 d.95.2.1 DNA ENDONUCLEASE I-CREI & DNA ENDONUCLEASE I-CREI & DNA & DNA
1372 3l2p 0.45 34.26 1.90 577 108 37 34 3 5 No_SCOP_id DNA LIGASE 3 & DNA & DNA & DNA
1373 3qfq 0.45 31.48 1.90 408 108 34 32 2 2 d.89.1.0 LARGE T ANTIGEN & DNA (26-MER) & DNA (26-MER)
1374 3klf 0.45 33.33 1.91 4028 108 36 34 2 1 No_SCOP_id REVERSE TRANSCRIPTASE/RIBONUCLEASE H & P51 RT & DNA & DNA
1375 3kqh 0.45 33.33 1.92 884 108 36 36 0 1 c.37.1.14 SERINE PROTEASE/NTPASE/HELICASE NS3 & DNA
1376 4hc7 0.45 30.56 1.92 285 108 33 23 10 3 No_SCOP_id TRANS-ACTING T-CELL-SPECIFIC TRANSCRIPTION FACTOR GATA-3 & DNA & DNA
1377 2nob 0.45 29.63 1.94 340 108 32 32 0 4 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1378 1skm 0.45 31.48 1.98 351 108 34 34 0 4 c.66.1.26 DNA & MODIFICATION METHYLASE HHAI
1379 3ndh 0.45 33.33 2.04 442 108 36 36 0 1 No_SCOP_id RESTRICTION ENDONUCLEASE THAI & DNA & DNA
1380 1crx 0.45 31.48 2.05 712 108 34 34 0 1 a.60.9.1;d.163.1.1 DNA & CRE RECOMBINASE
1381 3olb 0.45 36.11 2.08 1984 108 39 38 1 4 e.8.1.4 POLYMERASE & RNA (5'- R(*AP*AP*GP*UP*CP*U*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP*G P*AP*AP*A)-3') & RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*A)-3') & RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')
1382 4aso 0.45 33.33 2.09 1632 108 36 36 0 3 No_SCOP_id TUBR FROM BACILLUS THURINGIENSIS PBTOXIS & TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 24 BP & TUBC FROM BACILLUS THURINGIENSIS PBTOXIS 24 BP
1383 1yqk 0.45 36.11 2.12 332 108 39 39 0 4 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1384 3dlb 0.45 36.11 2.13 1260 108 39 39 0 4 No_SCOP_id ARGONAUTE & DNA
1385 1d2i 0.45 37.04 2.19 463 108 40 39 1 0 c.52.1.5 DNA & PROTEIN (RESTRICTION ENDONUCLEASE BGLII)
1386 3zqc 0.45 38.89 2.20 601 108 42 37 5 4 No_SCOP_id MYB3 & MRE-1 & MRE-1
1387 2q2k 0.43 28.97 1.86 107 108 31 31 0 2 No_SCOP_id DNA & HYPOTHETICAL PROTEIN
1388 1wd0 0.43 34.88 2.05 86 108 30 30 0 2 b.34.13.1 DNA & DNA-BINDING PROTEINS 7A/7B/7D
1389 2wcc 0.42 26.14 1.58 88 108 23 22 1 2 No_SCOP_id DNA & INTEGRASE
1390 1tc3 0.41 22.83 1.41 92 108 21 21 0 0 a.4.1.2 DNA & PROTEIN (TC3 TRANSPOSASE)
1391 2hos 0.41 19.44 0.66 156 108 21 20 1 2 a.4.1.1 DNA & SEGMENTATION POLARITY HOMEOBOX PROTEIN ENGRAILED
1392 3os2 0.41 21.30 1.05 580 108 23 23 0 2 No_SCOP_id INTEGRASE & DNA & DNA & DNA
1393 4e7j 0.41 21.30 1.07 579 108 23 23 0 5 No_SCOP_id PRO-POL POLYPROTEIN & DNA & DNA & DNA
1394 3h4b 0.41 23.15 1.18 387 108 25 25 0 1 d.240.1.1;e.8.1.7 DNA POLYMERASE IOTA & DNA & DNA
1395 1b3t 0.41 22.22 1.19 330 108 24 24 0 2 d.58.8.1 DNA & PROTEIN (NUCLEAR PROTEIN EBNA1)
1396 3g6y 0.41 23.15 1.19 386 108 25 25 0 1 No_SCOP_id DNA POLYMERASE IOTA & PRIMER DNA STRAND & TEMPLATE DNA STRAND
1397 1j5n 0.41 23.15 1.21 123 108 25 25 0 2 a.21.1.1 NONHISTONE CHROMOSOMAL PROTEIN 6A & DNA & DNA
1398 1osb 0.41 24.07 1.32 619 108 26 26 0 2 d.89.1.5 DNA OLIGONUCLEOTIDE & TRWC PROTEIN
1399 1ksy 0.41 25.00 1.36 501 108 27 26 1 4 d.89.1.2 E1 RECOGNITION SEQUENCE, STRAND 1 & E1 RECOGNITION SEQUENCE, STRAND 2 & REPLICATION PROTEIN E1
1400 2ssp 0.41 24.07 1.36 243 108 26 26 0 2 c.18.1.1 DNA & PROTEIN (URACIL-DNA GLYCOSYLASE)
1401 4ecs 0.41 24.07 1.40 450 108 26 26 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1402 1kx3 0.41 26.85 1.46 1058 108 29 29 0 2 a.22.1.1 DNA & HISTONE H2B.2
1403 3u61 0.41 25.93 1.46 2092 108 28 28 0 2 No_SCOP_id DNA POLYMERASE ACCESSORY PROTEIN 44 & DNA POLYMERASE ACCESSORY PROTEIN 62 & DNA POLYMERASE PROCESSIVITY COMPONENT & TEMPLATE DNA STRAND & PRIMER DNA STRAND
1404 4dl4 0.41 24.07 1.46 447 108 26 26 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1405 3l1p 0.41 26.85 1.47 338 108 29 28 1 5 No_SCOP_id POU DOMAIN, CLASS 5, TRANSCRIPTION FACTOR 1 & DNA & DNA
1406 1dul 0.41 25.93 1.49 109 108 28 28 0 1 a.36.1.1 4.5 S RNA DOMAIN IV & SIGNAL RECOGNITION PARTICLE PROTEIN (FIFTY-FOUR HOMOLOG)
1407 3f22 0.41 25.00 1.51 211 108 27 26 1 2 a.4.5.19 DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE & DNA
1408 2xo6 0.41 25.00 1.52 328 108 27 27 0 3 No_SCOP_id TRANSPOSASE & DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE & DNA
1409 1hdd 0.41 25.93 1.53 156 108 28 18 10 2 a.4.1.1 DNA & PROTEIN (ENGRAILED HOMEODOMAIN)
1410 4bdy 0.41 24.07 1.54 588 108 26 26 0 0 No_SCOP_id INTEGRASE & 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND) & 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND)
1411 1i6j 0.41 25.93 1.62 272 108 28 28 0 3 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
1412 1ztt 0.41 25.93 1.62 271 108 28 28 0 3 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
1413 3ufd 0.41 26.85 1.65 381 108 29 29 0 3 No_SCOP_id REGULATORY PROTEIN & DNA & DNA
1414 3g2d 0.41 27.78 1.71 536 108 30 30 0 2 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
1415 2c62 0.41 28.70 1.77 148 108 31 30 1 1 d.18.1.1 ACTIVATED RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR P15 & DNA
1416 2pqu 0.41 26.85 1.77 294 108 29 29 0 2 d.51.1.1 12-MER C-RICH STRAND OF HUMAN TELOMERIC DNA & POLY(RC)-BINDING PROTEIN 2
1417 3od8 0.41 28.70 1.77 758 108 31 31 0 2 No_SCOP_id POLY [ADP-RIBOSE] POLYMERASE 1 & DNA & DNA
1418 7icn 0.41 29.63 1.77 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1419 9icw 0.41 29.63 1.77 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1420 2cv2 0.41 30.56 1.78 1086 108 33 30 3 1 a.97.1.1;c.26.1.1 TRNA & GLUTAMYL-TRNA SYNTHETASE
1421 1a31 0.41 27.78 1.79 491 108 30 30 0 3 d.163.1.2;e.15.1.1 DNA & PROTEIN (TOPOISOMERASE I)
1422 1h6f 0.41 27.78 1.79 418 108 30 30 0 2 b.2.5.4 T-BOX TRANSCRIPTION FACTOR TBX3 & DNA
1423 1iu3 0.41 28.70 1.79 270 108 31 30 1 2 d.228.1.1 DNA & SEQA PROTEIN
1424 3igm 0.41 27.78 1.81 149 108 30 30 0 2 No_SCOP_id PF14_0633 PROTEIN & DNA
1425 7icg 0.41 29.63 1.81 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1426 3fsi 0.41 26.85 1.82 264 108 29 29 0 3 e.8.1.2 REVERSE TRANSCRIPTASE DOMAIN & DNA & DNA
1427 3bam 0.41 29.63 1.84 438 108 32 32 0 1 c.52.1.3 DNA & PROTEIN (RESTRICTION ENDONUCLEASE BAMHI)
1428 3g99 0.41 27.78 1.84 184 108 30 30 0 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1429 3jrg 0.41 29.63 1.85 243 108 32 31 1 0 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1430 8icu 0.41 29.63 1.85 342 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1431 2du3 0.41 28.70 1.86 1070 108 31 31 0 3 No_SCOP_id TRNA & O-PHOSPHOSERYL-TRNA SYNTHETASE
1432 8icn 0.41 29.63 1.86 342 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1433 1zns 0.41 29.63 1.88 142 108 32 30 2 4 d.4.1.1 DNA & COLICIN E7
1434 2h7f 0.41 32.41 1.89 338 108 35 34 1 4 No_SCOP_id DNA & DNA TOPOISOMERASE 1
1435 4aag 0.41 30.56 1.89 352 108 33 33 0 2 No_SCOP_id DNA ENDONUCLEASE I-CREI & DNA
1436 1nzb 0.41 31.48 1.91 1443 108 34 33 1 2 a.60.9.1;d.163.1.1 LOXP DNA & LOXP DNA & CRE RECOMBINASE
1437 1e8o 0.41 32.41 1.93 345 108 35 35 0 4 d.49.1.1 SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN & SIGNAL RECOGNITION PARTICLE 14 KDA PROTEIN & 7SL RNA
1438 1ram 0.41 31.48 1.93 586 108 34 32 2 5 b.1.18.1;b.2.5.3 DNA & PROTEIN (TRANSCRIPTION FACTOR NF-KB P65)
1439 1s40 0.41 31.48 1.94 198 108 34 34 0 1 b.40.4.3 CELL DIVISION CONTROL PROTEIN 13 & DNA
1440 9icp 0.41 30.56 1.95 339 108 33 33 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1441 2p0j 0.41 34.26 1.96 421 108 37 37 0 2 c.52.1.21 DNA & BSTYI
1442 3ktu 0.41 29.63 1.96 338 108 32 32 0 4 No_SCOP_id N-GLYCOSYLASE/DNA LYASE & DNA & DNA
1443 2yvh 0.41 33.33 1.97 730 108 36 34 2 3 No_SCOP_id TRANSCRIPTIONAL REGULATOR & DNA & DNA
1444 2zh3 0.41 32.41 2.04 471 108 35 35 0 3 a.160.1.3;d.58.16.2;d.218.1.7 CCA-ADDING ENZYME & TRNA (34-MER)
1445 2ex5 0.41 34.26 2.07 466 108 37 35 2 3 No_SCOP_id I-CEUI DNA TARGET SITE & I-CEUI DNA TARGET SITE, COMPLIMENTARY STRAND & DNA ENDONUCLEASE I-CEUI
1446 5crx 0.41 34.26 2.07 659 108 37 37 0 4 a.60.9.1;d.163.1.1 DNA (35-MER) & PROTEIN (BACTERIOPHAGE P1 CRE GENE)
1447 2jlg 0.41 37.04 2.12 1993 108 40 40 0 5 e.8.1.6 RNA-DIRECTED RNA POLYMERASE & DNA
1448 1eoo 0.41 37.96 2.18 512 108 41 41 0 0 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1449 3f2d 0.41 37.04 2.18 1024 108 40 40 0 3 No_SCOP_id DNA & GEOBACILLUS KAUSTOPHILUS DNA POLC
1450 3vd1 0.41 32.41 2.19 1699 108 35 33 2 1 b.2.5.2 TUMOR PROTEIN P73 & DNA
1451 1bf4 0.40 28.21 1.82 78 108 22 22 0 1 b.34.13.1 DNA & PROTEIN (CHROMOSOMAL PROTEIN SSO7D)
1452 3l2w 0.37 21.30 1.12 564 108 23 23 0 0 No_SCOP_id INTEGRASE & DNA & DNA
1453 1nh2 0.37 24.07 1.27 410 108 26 26 0 3 a.32.1.1;b.56.1.1;d.129.1.1 DNA & TRANSCRIPTION INITIATION FACTOR IIA SMALL CHAIN
1454 2or1 0.37 24.07 1.28 166 108 26 22 4 2 a.35.1.2 DNA & 434 REPRESSOR
1455 1qzg 0.37 23.15 1.32 350 108 25 25 0 0 b.40.4.3 TELOMERIC SINGLE-STRANDED DNA & PROTECTION OF TELOMERES PROTEIN 1
1456 2iif 0.37 23.15 1.35 274 108 25 25 0 1 No_SCOP_id PHAGE P H' SITE & DNA & DNA & INTEGRATION HOST FACTOR
1457 1m5r 0.37 23.15 1.41 752 108 25 25 0 2 c.87.1.1 DNA & DNA BETA-GLUCOSYLTRANSFERASE
1458 3lwp 0.37 24.07 1.43 560 108 26 26 0 3 g.41.16.1 PSEUDOURIDINE SYNTHASE CBF5 & RIBOSOME BIOGENESIS PROTEIN NOP10 & 50S RIBOSOMAL PROTEIN L7AE & H/ACA RNA & 5'-R(*GP*AP*GP*CP*GP*(BRU)P*GP*CP*GP*GP*UP*UP*U)-3
1459 2acj 0.37 24.07 1.44 281 108 26 26 0 2 a.4.5.19 DNA & DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE
1460 2i82 0.37 24.07 1.50 917 108 26 26 0 3 No_SCOP_id 5'- R(*GP*AP*GP*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*CP*CP *UP*C)-3' & RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE A
1461 2vju 0.37 24.07 1.56 334 108 26 26 0 0 d.58.57.1 TRANSPOSASE ORFA & RIGHT END 35-MER
1462 3mr5 0.37 25.93 1.56 447 108 28 28 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1463 1d5y 0.37 25.00 1.58 1236 108 27 27 0 2 a.4.1.8;d.60.1.2 DNA & ROB TRANSCRIPTION FACTOR
1464 4bdz 0.37 25.00 1.62 588 108 27 27 0 1 No_SCOP_id PFV INTEGRASE & 19 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (NON-TRANSFERRED STRAND) & 17 NUCLEOTIDE PREPROCESSED PFV DONOR DNA (TRANSFERRED STRAND)
1465 2pxu 0.37 25.93 1.63 110 108 28 28 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1466 1j4w 0.37 27.78 1.64 160 108 30 30 0 2 d.51.1.1 FUSE BINDING PROTEIN & DNA
1467 1id3 0.37 28.70 1.65 1057 108 31 30 1 2 a.22.1.1 PALINDROMIC 146BP DNA FRAGMENT & HISTONE H3 & HISTONE H4 & HISTONE H2A.1 & HISTONE H2B.2
1468 2pxe 0.37 25.93 1.65 110 108 28 28 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1469 2ac0 0.37 26.85 1.67 837 108 29 25 4 2 b.2.5.2 DNA & CELLULAR TUMOR ANTIGEN P53
1470 2qnf 0.37 27.78 1.67 378 108 30 30 0 2 a.140.4.1;d.4.1.5 RECOMBINATION ENDONUCLEASE VII & DNA & DNA & DNA & DNA
1471 3u5z 0.37 26.85 1.68 4322 108 29 29 0 2 No_SCOP_id DNA POLYMERASE ACCESSORY PROTEIN 44 & DNA POLYMERASE ACCESSORY PROTEIN 62 & DNA POLYMERASE PROCESSIVITY COMPONENT & TEMPLATE DNA STRAND & PRIMER DNA STRAND
1472 2w36 0.37 26.85 1.69 474 108 29 28 1 2 No_SCOP_id ENDONUCLEASE V & DNA & DNA
1473 3n1i 0.37 28.70 1.72 170 108 31 31 0 2 d.18.1.0 PROTEIN STWHY2 & DNA 32-MER ERE32
1474 2ram 0.37 28.70 1.74 582 108 31 31 0 2 b.1.18.1;b.2.5.3 DNA & PROTEIN (TRANSCRIPTION FACTOR NF-KB P65)
1475 2bam 0.37 28.70 1.76 440 108 31 31 0 1 c.52.1.3 DNA & PROTEIN (ENDONUCLEASE BAMHI)
1476 3bsb 0.37 28.70 1.76 690 108 31 31 0 0 a.118.1.8 PUMILIO HOMOLOG 1 & 5'-R(*UP*UP*UP*AP*AP*UP*GP*UP*U)-3'
1477 3u3y 0.37 28.70 1.76 443 108 31 30 1 0 No_SCOP_id THREE PRIME REPAIR EXONUCLEASE 1 & DNA
1478 3k4x 0.37 26.85 1.78 778 108 29 29 0 0 d.131.1.2 PROLIFERATING CELL NUCLEAR ANTIGEN & DNA & DNA
1479 1fok 0.37 27.78 1.79 608 108 30 30 0 1 a.4.5.12;c.52.1.12 DNA & PROTEIN (FOKI RESTRICTION ENDONUCLEAS)
1480 3o1m 0.37 27.78 1.79 224 108 30 30 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1481 3o1p 0.37 27.78 1.79 225 108 30 30 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1482 7icl 0.37 29.63 1.79 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1483 3bi3 0.37 28.70 1.80 224 108 31 31 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1484 3bkz 0.37 28.70 1.81 226 108 31 31 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1485 2fjv 0.37 26.85 1.82 271 108 29 29 0 3 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
1486 3mkz 0.37 30.56 1.82 516 108 33 33 0 3 No_SCOP_id PROTEIN SOPB & DNA
1487 3o1r 0.37 29.63 1.82 225 108 32 32 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1488 2dem 0.37 28.70 1.84 247 108 31 29 2 2 No_SCOP_id DNA & URACIL-DNA GLYCOSYLASE
1489 3mxb 0.37 30.56 1.86 708 108 33 33 0 2 d.95.2.1 V3(E8K) & V2(K7E-G19S) & DNA & DNA
1490 3o1u 0.37 30.56 1.87 225 108 33 33 0 1 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1491 1qrv 0.37 28.70 1.89 164 108 31 31 0 5 a.21.1.1 DNA & HIGH MOBILITY GROUP PROTEIN D
1492 4aqx 0.37 30.56 1.89 351 108 33 33 0 2 No_SCOP_id DNA ENDONUCLEASE I-CREI & DNA & DNA & DNA & DNA
1493 9icl 0.37 30.56 1.89 339 108 33 33 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1494 2y8y 0.37 26.85 1.91 219 108 29 28 1 1 d.58.53.1;d.58.53.0 CSE3 & 5'-R(*UP*CP*CP*CP*CP*AP*CP*GP*CP*GP*UP*GP*UP*GP *GP*GP*DGP*AP*U)-3'
1495 3adb 0.37 30.56 1.91 672 108 33 28 5 4 No_SCOP_id L-SERYL-TRNA(SEC) KINASE & SELENOCYSTEINE TRNA
1496 3o1t 0.37 31.48 1.91 225 108 34 34 0 1 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1497 4aad 0.37 30.56 1.91 351 108 33 33 0 1 No_SCOP_id DNA ENDONUCLEASE I-CREI & 24MER DNA
1498 1yz9 0.37 29.63 1.92 482 108 32 32 0 1 a.149.1.1;d.50.1.1 5'-R(*CP*GP*AP*AP*CP*UP*UP*CP*GP*CP*G)-3' & RIBONUCLEASE III
1499 1o0b 0.37 30.56 1.93 603 108 33 33 0 2 b.53.1.2;c.26.1.1 GLUTAMINYL TRNA & GLUTAMINYL-TRNA SYNTHETASE
1500 3kqk 0.37 30.56 1.93 884 108 33 33 0 0 c.37.1.14 SERINE PROTEASE/NTPASE/HELICASE NS3 & DNA
1501 1q3u 0.37 32.41 1.94 1443 108 35 34 1 2 a.60.9.1;d.163.1.1 LOXP DNA & LOXP DNA & CRE RECOMBINASE
1502 3lwv 0.37 31.48 1.96 559 108 34 29 5 0 g.41.16.1 PSEUDOURIDINE SYNTHASE CBF5 & RIBOSOME BIOGENESIS PROTEIN NOP10 & 50S RIBOSOMAL PROTEIN L7AE & H/ACA RNA & 5'-R(*GP*AP*GP*CP*GP*(DU)P*GP*CP*GP*GP*UP*UP*U)-3'
1503 3iag 0.37 31.48 1.98 452 108 34 34 0 3 No_SCOP_id DNA & RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS
1504 2d45 0.37 32.41 1.99 513 108 35 35 0 3 a.4.5.39 DNA & METHICILLIN RESISTANCE REGULATORY PROTEIN MECI
1505 7icq 0.37 31.48 1.99 339 108 34 34 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1506 1f8v 0.37 33.33 2.01 1071 108 36 36 0 1 b.121.4.4 RNA & MATURE CAPSID PROTEIN BETA & MATURE CAPSID PROTEIN GAMMA
1507 1n3a 0.37 30.56 2.02 343 108 33 33 0 4 a.96.1.3;d.129.1.2 DNA COMPLEMENT STRAND & DNA INHIBITOR STRAND & N-GLYCOSYLASE/DNA LYASE
1508 1zqj 0.37 35.19 2.05 341 108 38 38 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1509 2w8k 0.37 31.48 2.05 370 108 34 34 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1510 1qqa 0.37 33.33 2.06 355 108 36 36 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE NUCLEOTIDE SYNTHESIS REPRESSOR)
1511 1zs4 0.37 37.04 2.06 370 108 40 40 0 1 a.35.1.9 DNA - 27MER & DNA - 27MER & REGULATORY PROTEIN CII
1512 3d0a 0.37 33.33 2.07 823 108 36 36 0 1 b.2.5.2 CELLULAR TUMOR ANTIGEN P53 & DNA
1513 1yqm 0.37 31.48 2.08 338 108 34 34 0 5 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1514 2kn7 0.37 32.41 2.10 154 108 35 34 1 4 a.60.2.5 DNA REPAIR ENDONUCLEASE XPF & DNA
1515 2xhi 0.37 34.26 2.11 343 108 37 36 1 3 a.96.1.3;d.129.1.0 N-GLYCOSYLASE/DNA LYASE & DNA & DNA
1516 3pw5 0.37 33.33 2.12 369 108 36 36 0 4 No_SCOP_id DNA POLYMERASE IV & DNA & DNA
1517 2agq 0.37 34.26 2.13 370 108 37 37 0 4 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
1518 2bqr 0.37 34.26 2.14 370 108 37 37 0 4 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1519 2ez6 0.37 36.11 2.16 492 108 39 39 0 2 a.149.1.1;d.50.1.1 28-MER & RIBONUCLEASE III
1520 1zvv 0.37 38.89 2.22 1290 108 42 42 0 2 a.35.1.5;c.93.1.1;d.94.1.1 DNA RECOGNITION STRAND CRE & GLUCOSE-RESISTANCE AMYLASE REGULATOR & HPR-LIKE PROTEIN CRH
1521 3g0q 0.37 39.81 2.27 363 108 43 43 0 4 a.96.1.2;d.113.1.3 A/G-SPECIFIC ADENINE GLYCOSYLASE & DNA & DNA
1522 6gat 0.36 23.91 1.43 92 108 22 22 0 1 g.39.1.1 DNA & NITROGEN REGULATORY PROTEIN AREA
1523 1yuj 0.35 26.32 1.69 76 108 20 20 0 1 g.37.1.1 DNA & GAGA-FACTOR
1524 1yui 0.35 27.63 1.78 76 108 21 21 0 0 g.37.1.1 DNA & GAGA-FACTOR
1525 3ts8 0.33 21.30 1.16 988 108 23 23 0 3 No_SCOP_id CELLULAR TUMOR ANTIGEN P53 & CDKN1A(P21) SENSE STRAND & CDKN1A(P21) ANTI-SENSE STRAND
1526 3isc 0.33 22.22 1.27 357 108 24 24 0 2 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA & DNA
1527 4ecx 0.33 24.07 1.29 450 108 26 26 0 2 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1528 1orn 0.33 23.15 1.30 234 108 25 25 0 2 a.96.1.1 DNA & ENDONUCLEASE III
1529 1xjv 0.33 23.15 1.33 301 108 25 25 0 2 b.40.4.3 HT10 D(TTAGGGTTAG) & PROTECTION OF TELOMERES 1
1530 1kb4 0.33 24.07 1.39 228 108 26 26 0 1 g.39.1.2 DNA & VITAMIN D3 RECEPTOR
1531 4ect 0.33 25.00 1.42 450 108 27 27 0 2 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1532 1a0a 0.33 25.93 1.44 160 108 28 28 0 2 a.38.1.1 DNA & PROTEIN (PHOSPHATE SYSTEM POSITIVE REGULATORY PROTEIN PHO4)
1533 1uvj 0.33 24.07 1.45 2004 108 26 26 0 0 e.8.1.6 P2 PROTEIN & 5'-R(*UP*UP*CP*CP)-3'
1534 1omh 0.33 25.00 1.46 303 108 27 27 0 2 d.89.1.5 DNA OLIGONUCLEOTIDE & TRWC PROTEIN
1535 1sds 0.33 25.93 1.46 381 108 28 28 0 0 d.79.3.1 BOX H/ACA SRNA & 50S RIBOSOMAL PROTEIN L7AE
1536 2zzm 0.33 25.93 1.56 413 108 28 28 0 0 No_SCOP_id UNCHARACTERIZED PROTEIN MJ0883 & RNA (84-MER)
1537 3iin 0.33 25.00 1.59 315 108 27 27 0 2 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & GROUP I INTRON & DNA/RNA (5'- R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*GP*AP*CP*C)-D(P*AP*GP*A)- R(P*CP*GP*GP*CP*C)-3') & DNA/RNA (5'-R(*CP*A)-D(P*T)-3')
1538 2qhb 0.33 26.85 1.61 199 108 29 29 0 2 a.4.1.3 TELOMERE BINDING PROTEIN TBP1 & DNA & DNA
1539 3btz 0.33 25.00 1.63 227 108 27 27 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1540 1zzn 0.33 25.93 1.64 314 108 28 26 2 4 d.58.7.1 197-MER & 5'- R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP *GP*CP*C)-3' & 5'-R(*CP*AP*(5MU))-3' & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A RNA BINDING DOMAIN
1541 3v72 0.33 24.07 1.64 345 108 26 26 0 2 No_SCOP_id DNA POLYMERASE BETA & DNA & DNA
1542 1kbu 0.33 26.85 1.66 711 108 29 28 1 0 a.60.9.1;d.163.1.1 LOXP & LOXP & CRE RECOMBINASE
1543 1mjo 0.33 25.93 1.67 454 108 28 28 0 4 a.43.1.5 CONSENSUS DNA OPERATOR DUPLEX WITH THE CENTRAL TA STEP MUTATED TO AT & METHIONINE REPRESSOR
1544 2bjc 0.33 25.93 1.67 168 108 28 28 0 3 a.35.1.5 LACTOSE OPERON REPRESSOR & DNA
1545 3pmn 0.33 27.78 1.69 333 108 30 30 0 1 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE LAMBDA & DNA & DNA & DNA
1546 1mow 0.33 25.93 1.70 1147 108 28 28 0 2 d.95.2.1 DNA & CHIMERA OF HOMING ENDONUCLEASE I-DMOI AND DNA ENDONUCLEASE I-CREI
1547 1n3f 0.33 27.78 1.72 692 108 30 30 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1548 1jfs 0.33 27.78 1.73 356 108 30 30 0 0 a.35.1.5;c.93.1.1 DNA & PURINE NUCLEOTIDE SYNTHESIS REPRESSOR
1549 9icu 0.33 28.70 1.73 339 108 31 31 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1550 2wiw 0.33 26.85 1.74 266 108 29 29 0 2 No_SCOP_id HJC & DNA
1551 3hxq 0.33 27.78 1.74 242 108 30 29 1 2 c.62.1.1 VON WILLEBRAND FACTOR & APTAMER ARC1172
1552 7icp 0.33 28.70 1.74 339 108 31 31 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1553 2r2s 0.33 26.85 1.76 270 108 29 29 0 1 e.8.1.2 REVERSE TRANSCRIPTASE & DNA & DNA
1554 3rzm 0.33 25.93 1.78 226 108 28 28 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1555 3bie 0.33 27.78 1.79 225 108 30 30 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1556 3o1s 0.33 27.78 1.80 225 108 30 30 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1557 9icg 0.33 29.63 1.80 341 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1558 1zlk 0.33 27.78 1.81 179 108 30 29 1 5 a.4.6.0 DNA & DORMANCY SURVIVAL REGULATOR
1559 2nug 0.33 27.78 1.81 478 108 30 28 2 1 a.149.1.1;d.50.1.1 5'-R(P*AP*AP*GP*GP*UP*CP*AP*UP*UP*CP*G)-3' & 5'-R(P*AP*GP*UP*GP*GP*CP*CP*UP*UP*GP*C)-3' & RIBONUCLEASE III
1560 1zbl 0.33 29.63 1.82 290 108 32 32 0 1 c.55.3.1 5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*C)-3' & DNA & RIBONUCLEASE H-RELATED PROTEIN
1561 1f2i 0.33 28.70 1.83 477 108 31 31 0 1 g.37.1.1 DNA & FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO ZIF12
1562 3k4e 0.33 28.70 1.83 1059 108 31 31 0 3 No_SCOP_id MRNA-BINDING PROTEIN PUF3 & RNA (5'-R(P*CP*UP*UP*GP*UP*AP*UP*AP*UP*A)-3')
1563 2r7y 0.33 32.41 1.85 142 108 35 35 0 2 c.55.3.1 RIBONUCLEASE H & RNA (5'-R(*UP*CP*GP*AP*CP*A)-3') & DNA
1564 1xi1 0.33 27.78 1.86 1148 108 30 30 0 2 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
1565 2p5l 0.33 28.70 1.86 325 108 31 30 1 2 a.4.5.3 DNA & ARGININE REPRESSOR
1566 3o9x 0.33 30.56 1.86 316 108 33 33 0 3 No_SCOP_id UNCHARACTERIZED HTH-TYPE TRANSCRIPTIONAL REGULATOR YGIT & DNA (26-MER) & DNA (26-MER)
1567 2b3j 0.33 31.48 1.87 654 108 34 34 0 0 c.97.1.2 ANTICODON STEM-LOOP OF T-RNA-ARG2 (NUCLEOTIDES 27-42) & TRNA ADENOSINE DEAMINASE
1568 9icn 0.33 29.63 1.88 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1569 1mvm 0.33 28.70 1.89 565 108 31 31 0 1 b.121.5.2 PROTEIN (MURINE MINUTE VIRUS COAT PROTEIN) & DNA & DNA & DNA
1570 1ya6 0.33 29.63 1.89 781 108 32 32 0 3 No_SCOP_id DNA & DNA ALPHA-GLUCOSYLTRANSFERASE
1571 3o1o 0.33 29.63 1.89 224 108 32 32 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1572 3brg 0.33 28.70 1.91 444 108 31 31 0 3 b.1.18.0;b.42.7.0 RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS & DNA & DNA
1573 3cun 0.33 30.56 1.91 357 108 33 33 0 2 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (92-MER)
1574 3gp8 0.33 29.63 1.92 559 108 32 32 0 2 No_SCOP_id EXODEOXYRIBONUCLEASE V, SUBUNIT RECD, PUTATIVE & DNA
1575 7icm 0.33 30.56 1.92 339 108 33 33 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1576 1ddl 0.33 30.56 1.93 560 108 33 33 0 4 b.121.4.6 RNA (5'-R(P*UP*UP*UP*UP*UP*UP*U)-3') & RNA (5'-R(P*UP*U)-3') & DESMODIUM YELLOW MOTTLE VIRUS
1577 3g6p 0.33 27.78 1.93 191 108 30 29 1 1 g.39.1.2 DNA & GLUCOCORTICOID RECEPTOR
1578 4aaf 0.33 29.63 1.93 351 108 32 32 0 2 No_SCOP_id DNA ENDONUCLEASE I-CREI & 24MER DNA
1579 2han 0.33 29.63 1.95 205 108 32 31 1 0 g.39.1.2 DNA & ECDYSONE RECEPTOR
1580 1n3c 0.33 29.63 1.98 343 108 32 32 0 4 a.96.1.3;d.129.1.2 DNA COMPLEMENT STRAND & 8-OXOG-CONTAINING DNA & N-GLYCOSYLASE/DNA LYASE
1581 1rc7 0.33 33.33 1.98 260 108 36 36 0 3 a.149.1.1;d.50.1.1 5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3' & RIBONUCLEASE III
1582 3cvt 0.33 28.70 1.98 1174 108 31 30 1 0 a.96.1.3;d.129.1.2 DNA-3-METHYLADENINE GLYCOSYLASE 2 & DNA & DNA
1583 1zbi 0.33 30.56 1.99 295 108 33 31 2 2 c.55.3.1 5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*UP*UP*C)-3' & DNA & RIBONUCLEASE H-RELATED PROTEIN
1584 1kqq 0.33 31.48 2.00 161 108 34 32 2 6 a.4.3.1 DEAD RINGER PROTEIN & DNA & DNA
1585 3oqm 0.33 31.48 2.00 868 108 34 34 0 4 No_SCOP_id CATABOLITE CONTROL PROTEIN A & PHOSPHOCARRIER PROTEIN HPR & DNA & DNA
1586 1sx5 0.33 35.19 2.08 504 108 38 38 0 0 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1587 3m7k 0.33 33.33 2.10 160 108 36 36 0 1 No_SCOP_id RESTRICTION ENDONUCLEASE PACI & DNA & DNA
1588 4ew0 0.33 33.33 2.11 164 108 36 33 3 1 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
1589 1bss 0.33 36.11 2.13 480 108 39 39 0 4 c.52.1.2 DNA & ECORV ENDONUCLEASE
1590 6cro 0.30 27.00 1.70 100 108 27 26 1 2 a.35.1.2 DNA & LAMBDA CRO REPRESSOR
1591 3rje 0.28 20.37 1.09 359 108 22 22 0 0 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
1592 1tv9 0.28 22.22 1.23 363 108 24 24 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & DNA POLYMERASE BETA
1593 2opf 0.28 22.22 1.28 278 108 24 24 0 0 a.156.1.2;b.113.1.1;g.39.1.8 ENDONUCLEASE VIII & DNA & DNA
1594 3h25 0.28 21.30 1.30 215 108 23 23 0 2 No_SCOP_id REPLICATION PROTEIN B & SINGLE STRANDED INITIATOR DNA (SSIA)
1595 3kmp 0.28 23.15 1.34 277 108 25 22 3 2 d.164.1.1 SMAD1-MH1 & DNA & DNA
1596 3kjo 0.28 23.15 1.37 301 108 25 25 0 2 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA/RNA (5'-D(*T)-R(P*U)- D(P*AP*GP*GP*GP*TP*TP*AP*G)-3')
1597 3rjg 0.28 23.15 1.38 356 108 25 25 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA POLYMERASE BETA & DNA & DNA & DNA
1598 4ed3 0.28 25.00 1.41 449 108 27 27 0 2 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1599 2xma 0.28 24.07 1.47 689 108 26 26 0 3 No_SCOP_id TRANSPOSASE & DRA2 TRANSPOSASE RIGHT END RECOGNITION SITE
1600 1qx0 0.28 24.07 1.48 310 108 26 26 0 2 d.89.1.5 DNA OLIGONUCLEOTIDE & TRWC PROTEIN
1601 3brd 0.28 23.15 1.48 472 108 25 25 0 2 b.1.18.1;b.2.5.8;b.42.7.1 LIN-12 AND GLP-1 PHENOTYPE PROTEIN 1, ISOFORM A & PROTEIN LIN-12 & DNA & DNA
1602 1hht 0.28 24.07 1.51 2007 108 26 26 0 0 e.8.1.6 P2 PROTEIN & DNA
1603 1uvi 0.28 24.07 1.51 2004 108 26 26 0 0 e.8.1.6 RNA-DEPENDENT RNA POLYMERASE & 5'-R(*UP*UP*UP*UP*CP*CP)-3'
1604 1hi0 0.28 24.07 1.52 2004 108 26 26 0 0 e.8.1.6 P2 PROTEIN & DNA
1605 2pxq 0.28 25.00 1.54 110 108 27 27 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1606 2vic 0.28 24.07 1.54 330 108 26 26 0 2 d.58.57.1 TRANSPOSASE ORFA & DNA
1607 2bqu 0.28 25.00 1.57 370 108 27 27 0 0 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1608 2rve 0.28 25.00 1.57 457 108 27 27 0 2 c.52.1.2 DNA & PROTEIN (ECO RV (E.C.3.1.21.4))
1609 1di2 0.28 25.93 1.61 169 108 28 27 1 0 d.50.1.1 RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3') & DOUBLE STRANDED RNA BINDING PROTEIN A
1610 2pxp 0.28 25.93 1.62 110 108 28 28 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1611 2w35 0.28 25.93 1.62 467 108 28 28 0 2 No_SCOP_id ENDONUCLEASE V & DNA & DNA
1612 3jrd 0.28 25.93 1.62 243 108 28 28 0 2 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1613 1c7y 0.28 23.15 1.64 299 108 25 25 0 3 a.5.1.1;a.60.2.1;b.40.4.2 HOLLIDAY JUNCTION DNA HELICASE RUVA & DNA & DNA & DNA & DNA & DNA & DNA & DNA & DNA
1614 2pxt 0.28 25.93 1.64 110 108 28 28 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1615 2jxi 0.28 27.78 1.67 118 108 30 30 0 2 a.43.1.11 PROLINE DEHYDROGENASE & DNA & DNA
1616 1svc 0.28 25.93 1.68 330 108 28 28 0 1 b.1.18.1;b.2.5.3 DNA & PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
1617 2o49 0.28 26.85 1.68 108 108 29 29 0 3 a.35.1.7 DNA-BINDING PROTEIN SATB1 & DNA & DNA
1618 2pfq 0.28 25.93 1.69 346 108 28 28 0 1 a.60.6.1;a.60.12.1;d.218.1.2 TEMPLATE & PRIMER & DOWNSTREAM PRIMER & DNA POLYMERASE LAMBDA
1619 3mky 0.28 25.00 1.69 265 108 27 27 0 3 No_SCOP_id DNA & PROTEIN SOPB
1620 1yfl 0.28 26.85 1.71 1053 108 29 29 0 2 c.66.1.28 DNA & DNA ADENINE METHYLASE
1621 2ivh 0.28 25.93 1.71 160 108 28 27 1 6 d.4.1.1 COLCIN-E7 & DNA
1622 2geq 0.28 26.85 1.72 405 108 29 28 1 2 b.2.5.2 DNA & CELLULAR TUMOR ANTIGEN P53
1623 3g6u 0.28 26.85 1.74 185 108 29 29 0 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1624 1pdn 0.28 26.85 1.75 153 108 29 29 0 2 a.4.1.5 DNA & PROTEIN (PRD PAIRED)
1625 9icq 0.28 29.63 1.77 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1626 3dsc 0.28 28.70 1.78 350 108 31 30 1 1 d.159.1.4 DNA DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 & DNA
1627 3jrf 0.28 28.70 1.78 243 108 31 30 1 3 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1628 3o1v 0.28 27.78 1.79 225 108 30 30 0 2 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
1629 9ich 0.28 29.63 1.79 341 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1630 2i9t 0.28 28.70 1.80 621 108 31 31 0 2 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR NF-KAPPA-B P105 SUBUNIT
1631 1pp8 0.28 26.85 1.81 751 108 29 28 1 0 a.4.5.44 ALPHA-SCS INR & ALPHA-SCS INR & 39 KDA INITIATOR BINDING PROTEIN
1632 7ice 0.28 29.63 1.81 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA)
1633 9icb 0.28 29.63 1.81 341 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1634 1lws 0.28 27.78 1.83 487 108 30 28 2 3 b.86.1.2;d.95.2.2 PI-SCEI DNA RECOGNITION REGION TOP STRAND & PI-SCEI DNA RECOGNITION REGION BOTTOM STRAND & ENDONUCLEASE PI-SCEI
1635 3g6r 0.28 26.85 1.83 189 108 29 29 0 1 g.39.1.2 DNA & GLUCOCORTICOID RECEPTOR
1636 2d6f 0.28 28.70 1.84 2001 108 31 31 0 2 a.182.1.2;b.38.3.1;b.38.3.0;c.88.1.1;d.74.4.1;d.128.1.5 TRNA & GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT D & GLUTAMYL-TRNA(GLN) AMIDOTRANSFERASE SUBUNIT E
1637 4enk 0.28 27.78 1.84 133 108 30 30 0 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
1638 7ick 0.28 29.63 1.88 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1639 1g9z 0.28 29.63 1.89 352 108 32 32 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1640 2h8c 0.28 30.56 1.91 499 108 33 33 0 1 d.79.6.1 DNA & CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASE RUSA
1641 9ict 0.28 30.56 1.91 339 108 33 33 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1642 3g96 0.28 27.78 1.92 968 108 30 30 0 0 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3') & GLMS RIBOZYME
1643 4a04 0.28 27.78 1.92 418 108 30 30 0 2 No_SCOP_id T-BOX TRANSCRIPTION FACTOR TBX1 & DNA
1644 1hlv 0.28 31.48 1.93 173 108 34 34 0 1 a.4.1.7 CENP-B BOX DNA & CENP-B BOX DNA & MAJOR CENTROMERE AUTOANTIGEN B
1645 3g9j 0.28 27.78 1.94 189 108 30 29 1 1 g.39.1.2 DNA & GLUCOCORTICOID RECEPTOR
1646 1owr 0.28 29.63 1.97 1256 108 32 32 0 1 b.1.18.1;b.2.5.3 NFAT1 MONOMERIC BINDING SITE, PLUS STRAND & NFAT1 MONOMERIC BINDING SITE, MINUS STRAND & NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2
1647 3g8t 0.28 30.56 1.99 966 108 33 31 2 6 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3') & GLMS GLUCOSAMINE-6-PHOSPHATE ACTIVATED RIBOZYME
1648 1kb2 0.28 30.56 2.02 210 108 33 33 0 3 g.39.1.2 DNA & VITAMIN D3 RECEPTOR
1649 1ynw 0.28 29.63 2.04 205 108 32 32 0 3 g.39.1.2 DNA & RETINOIC ACID RECEPTOR RXR-ALPHA
1650 2hzv 0.28 34.26 2.08 1152 108 37 36 1 7 a.43.1.3;d.58.18.4 DNA & NICKEL-RESPONSIVE REGULATOR
1651 2bq3 0.28 35.19 2.17 371 108 38 38 0 5 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1652 2aoq 0.28 37.04 2.18 244 108 40 40 0 5 c.52.1.14 DNA & DNA MISMATCH REPAIR PROTEIN MUTH
1653 2aor 0.28 35.19 2.21 483 108 38 38 0 5 c.52.1.14 DNA & DNA MISMATCH REPAIR PROTEIN MUTH
1654 1un6 0.28 35.19 2.23 353 108 38 36 2 1 g.37.1.1 TRANSCRIPTION FACTOR IIIA & 5S RIBOSOMAL RNA
1655 2ezf 0.25 20.59 1.11 34 108 7 7 0 0 j.10.1.1 DNA & HIGH MOBILITY GROUP PROTEIN HMG-I/HMG-Y
1656 2ezg 0.25 20.59 1.13 34 108 7 7 0 0 j.10.1.1 DNA & HIGH MOBILITY GROUP PROTEIN HMG-I/HMG-Y
1657 2oeh 0.24 21.30 1.28 136 108 23 23 0 1 a.4.3.1 AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5B & DNA & DNA
1658 1ign 0.24 21.30 1.31 453 108 23 23 0 2 a.4.1.6 DNA & PROTEIN (RAP1)
1659 2cv1 0.24 24.07 1.46 1086 108 26 26 0 1 a.97.1.1;c.26.1.1 TRNA & GLUTAMYL-TRNA SYNTHETASE
1660 4a8k 0.24 24.07 1.46 1998 108 26 26 0 0 No_SCOP_id RNA-DIRECTED RNA POLYMERASE & DNA & DNA
1661 4a8f 0.24 24.07 1.49 1996 108 26 26 0 0 No_SCOP_id RNA-DIRECTED RNA POLYMERASE & DNA
1662 2fjw 0.24 22.22 1.51 271 108 24 24 0 1 e.8.1.2 DNA & REVERSE TRANSCRIPTASE
1663 1wrq 0.24 25.00 1.54 300 108 27 27 0 0 d.275.1.1 5'-R(*UP*UP*UP*AP*GP*UP*U)-3' & HUT OPERON POSITIVE REGULATORY PROTEIN
1664 2pxd 0.24 25.00 1.54 110 108 27 27 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1665 3kjv 0.24 24.07 1.54 989 108 26 26 0 2 c.55.3.0;e.8.1.2 REVERSE TRANSCRIPTASE P66 SUBUNIT & REVERSE TRANSCRIPTASE P51 SUBUNIT & DNA & DNA
1666 1vol 0.24 25.00 1.57 423 108 27 27 0 0 a.74.1.2;d.129.1.1 DNA & PROTEIN (TATA BINDING PROTEIN (TBP))
1667 1jwl 0.24 25.93 1.60 955 108 28 28 0 4 a.35.1.5;c.93.1.1 DNA & LACTOSE OPERON REPRESSOR
1668 1iaw 0.24 24.07 1.61 675 108 26 22 4 3 c.52.1.9 DNA & TYPE II RESTRICTION ENZYME NAEI
1669 1ngm 0.24 25.00 1.61 1122 108 27 27 0 2 d.129.1.1;j.104.1.1 DNA & TRANSCRIPTION FACTOR IIIB BRF1 SUBUNIT
1670 1mjm 0.24 25.93 1.64 228 108 28 28 0 3 a.43.1.5 HALF CONSENSUS DNA OPERATOR DUPLEX & METHIONINE REPRESSOR
1671 3i0x 0.24 25.00 1.65 315 108 27 27 0 2 No_SCOP_id 8-OXOGUANINE-DNA-GLYCOSYLASE & DNA & DNA
1672 1z1c 0.24 26.85 1.68 570 108 29 29 0 2 b.121.5.2 COAT PROTEIN VP2 & DNA & DNA
1673 1m8y 0.24 26.85 1.71 703 108 29 29 0 3 a.118.1.8 5'-R(P*AP*UP*UP*GP*UP*AP*CP*AP*UP*A)-3' & PUMILIO 1
1674 1y6f 0.24 27.78 1.71 813 108 30 30 0 3 No_SCOP_id DNA & DNA ALPHA-GLUCOSYLTRANSFERASE
1675 1i7d 0.24 27.78 1.73 628 108 30 30 0 3 e.10.1.1 DNA & DNA TOPOISOMERASE III
1676 1u0d 0.24 27.78 1.74 352 108 30 30 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1677 3e6c 0.24 28.70 1.74 251 108 31 31 0 2 a.4.5.4;b.82.3.2 CYCLIC NUCLEOTIDE-BINDING PROTEIN & DNA & DNA
1678 1ruo 0.24 26.85 1.78 461 108 29 29 0 3 a.4.5.4;b.82.3.2 DNA & PROTEIN (CATABOLITE GENE ACTIVATOR PROTEIN (CAP) )
1679 3oye 0.24 25.00 1.78 588 108 27 27 0 1 No_SCOP_id PFV INTEGRASE & DNA & DNA
1680 6pax 0.24 25.00 1.78 185 108 27 27 0 1 a.4.1.5 26 NUCLEOTIDE DNA & 26 NUCLEOTIDE DNA & HOMEOBOX PROTEIN PAX-6
1681 5mht 0.24 27.78 1.81 350 108 30 30 0 4 c.66.1.26 DNA & PROTEIN (HHAI METHYLTRANSFERASE)
1682 1p6v 0.24 26.85 1.82 319 108 29 29 0 1 b.111.1.1 45-MER & SSRA-BINDING PROTEIN
1683 3rzg 0.24 26.85 1.82 232 108 29 29 0 4 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1684 3g6t 0.24 26.85 1.83 182 108 29 29 0 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1685 2py9 0.24 27.78 1.84 291 108 30 30 0 2 d.51.1.1 12-MER C-RICH STRAND OF HUMAN TELOMERIC RNA & POLY(RC)-BINDING PROTEIN 2
1686 1eon 0.24 26.85 1.85 490 108 29 29 0 2 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1687 1if1 0.24 28.70 1.85 261 108 31 31 0 3 a.4.5.23 DNA (26-MER) & PROTEIN (INTERFERON REGULATORY FACTOR 1)
1688 3g6q 0.24 26.85 1.86 184 108 29 29 0 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1689 3g8x 0.24 26.85 1.86 183 108 29 29 0 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1690 9ics 0.24 29.63 1.86 339 108 32 32 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1691 3exl 0.24 27.78 1.89 204 108 30 30 0 1 b.2.5.2 MOUSE P53 CORE DOMAIN & DNA & DNA
1692 2nl8 0.24 30.56 1.90 135 108 33 32 1 4 d.89.1.1 18-NT PEN ELEMENT OF THE SV40 DNA ORIGIN & LARGE T ANTIGEN
1693 8icr 0.24 30.56 1.90 342 108 33 33 0 2 a.60.6.1;a.60.12.1;d.218.1.2 DNA & PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
1694 1bdi 0.24 29.63 1.93 355 108 32 32 0 4 a.35.1.5;c.93.1.1 DNA & PROTEIN (PURINE REPRESSOR)
1695 3mxa 0.24 29.63 1.93 349 108 32 31 1 2 No_SCOP_id SCV3V2(G19S) & DNA & DNA & DNA & DNA
1696 1exd 0.24 29.63 1.94 602 108 32 32 0 1 b.53.1.2;c.26.1.1 GLUTAMINE TRNA APTAMER & GLUTAMINYL-TRNA SYNTHETASE
1697 3kz8 0.24 29.63 1.94 410 108 32 32 0 1 b.2.5.2 CELLULAR TUMOR ANTIGEN P53 & DNA
1698 1r0o 0.24 28.70 1.95 190 108 31 31 0 0 g.39.1.2 ECDYSONE RESPONSE ELEMENT & ECDYSONE RESPONSE ELEMENT & ULTRASPIRACLE PROTEIN & ECDYSONE RECEPTOR
1699 3ftf 0.24 29.63 1.97 290 108 32 32 0 0 c.66.1.0 DIMETHYLADENOSINE TRANSFERASE & 5'-R(P*AP*AP*CP*CP*GP*UP*AP*GP*GP*GP*GP*AP*AP*CP*CP*UP*GP*C P*GP*GP*UP*U)-3'
1700 4e9g 0.24 30.56 1.97 162 108 33 31 2 2 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
1701 1lww 0.24 28.70 1.98 343 108 31 31 0 4 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE
1702 3e54 0.24 29.63 1.99 362 108 32 29 3 0 No_SCOP_id RRNA INTRON-ENCODED ENDONUCLEASE & DNA & DNA & DNA & DNA
1703 1lwv 0.24 28.70 2.00 343 108 31 31 0 4 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE
1704 3g9i 0.24 28.70 2.01 192 108 31 30 1 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1705 4dkj 0.24 30.56 2.03 414 108 33 31 2 2 No_SCOP_id CYTOSINE-SPECIFIC METHYLTRANSFERASE & DNA & DNA
1706 1h0m 0.24 33.33 2.10 966 108 36 34 2 2 a.4.6.2;d.110.5.1 TRANSCRIPTIONAL ACTIVATOR PROTEIN TRAR & DNA
1707 1eri 0.24 31.48 2.12 274 108 34 34 0 2 c.52.1.1 DNA & PROTEIN (ECO RI ENDONUCLEASE (E.C.3.1.21.4))
1708 1imh 0.24 33.33 2.18 592 108 36 36 0 4 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR OF ACTIVATED T CELLS 5
1709 4gop 0.24 35.19 2.19 1371 108 38 38 0 3 No_SCOP_id PUTATIVE UNCHARACTERIZED PROTEIN & PUTATIVE UNCHARACTERIZED PROTEIN & PUTATIVE UNCHARACTERIZED PROTEIN & DNA (25-MER)
1710 1xbr 0.24 37.96 2.22 415 108 41 41 0 0 b.2.5.4 DNA & PROTEIN (T PROTEIN)
1711 3epk 0.24 38.89 2.25 942 108 42 42 0 3 No_SCOP_id TRNA ISOPENTENYLTRANSFERASE & TRNA
1712 1gat 0.24 25.00 1.60 76 108 19 15 4 0 g.39.1.1 DNA & ERYTHROID TRANSCRIPTION FACTOR GATA-1
1713 1g4d 0.23 21.78 1.22 101 108 22 13 9 3 a.6.1.7 REPRESSOR PROTEIN C & DNA & DNA
1714 1hcr 0.20 18.99 0.87 79 108 15 15 0 3 a.4.1.2 DNA & PROTEIN (HIN RECOMBINASE)
1715 3f27 0.20 22.64 1.34 106 108 24 24 0 2 a.21.1.1 DNA & TRANSCRIPTION FACTOR SOX-17
1716 3sse 0.20 19.44 1.04 325 108 21 21 0 1 No_SCOP_id 5-METHYLCYTOSINE-SPECIFIC RESTRICTION ENZYME B & DNA & DNA
1717 2pxl 0.20 20.37 1.05 108 108 22 21 1 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1718 1bc8 0.20 20.37 1.06 113 108 22 16 6 5 a.4.5.21 DNA & PROTEIN (SAP-1 ETS DOMAIN)
1719 2nny 0.20 20.37 1.11 302 108 22 16 6 6 a.4.5.21 DNA & C-ETS-1 PROTEIN
1720 3jrc 0.20 21.30 1.15 243 108 23 22 1 0 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1721 3brf 0.20 20.37 1.17 466 108 22 22 0 3 b.1.18.1;b.2.5.8;b.42.7.1 LIN-12 AND GLP-1 PHENOTYPE PROTEIN 1, ISOFORM A & PROTEIN LIN-12 & DNA & DNA
1722 4dk9 0.20 22.22 1.31 161 108 24 24 0 4 a.96.1.2 DNA & METHYL-CPG-BINDING DOMAIN PROTEIN 4
1723 1m5p 0.20 21.30 1.41 408 108 23 20 3 0 d.58.7.1 RNA INHIBITOR SUBSTRATE & RNA INHIBITOR SUBSTRATE & RNA HAIRPIN RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
1724 2ntc 0.20 22.22 1.41 295 108 24 24 0 2 d.89.1.1 21-NT PEN ELEMENT OF THE SV40 DNA ORIGIN & 21-NT PEN ELEMENT OF THE SV40 DNA ORIGIN & LARGE T ANTIGEN
1725 4a8y 0.20 24.07 1.47 1979 108 26 26 0 0 No_SCOP_id RNA-DIRECTED RNA POLYMERASE & DNA
1726 1a74 0.20 22.22 1.48 366 108 24 24 0 2 d.4.1.3 DNA & INTRON-ENCODED ENDONUCLEASE I-PPOI
1727 4a8q 0.20 24.07 1.48 1986 108 26 26 0 0 e.8.1.6 RNA-DIRECTED RNA POLYMERASE & DNA
1728 1d66 0.20 23.15 1.49 152 108 25 23 2 1 g.38.1.1;h.1.3.1 DNA & PROTEIN (GAL4)
1729 1ipp 0.20 22.22 1.49 366 108 24 24 0 2 d.4.1.3 DNA & INTRON-ENCODED ENDONUCLEASE I-PPOI
1730 2nra 0.20 23.15 1.52 298 108 25 24 1 3 a.4.5.10 DNA & PI PROTEIN
1731 2pxf 0.20 25.00 1.57 110 108 27 27 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1732 1m8x 0.20 25.00 1.64 697 108 27 27 0 4 a.118.1.8 5'-R(P*UP*UP*GP*UP*AP*UP*AP*U)-3' & 5'-R(P*UP*GP*UP*AP*UP*AP*U)-3' & PUMILIO 1
1733 1mjq 0.20 25.93 1.67 908 108 28 28 0 2 a.43.1.5 MUTATED MET CONSENSUS OPERATOR DUPLEX & METHIONINE REPRESSOR
1734 2xro 0.20 25.00 1.67 1043 108 27 16 11 3 No_SCOP_id HTH-TYPE TRANSCRIPTIONAL REGULATOR TTGV & TTGV OPERATOR DNA & TTGV OPERATOR DNA
1735 3h8o 0.20 25.00 1.68 230 108 27 27 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1736 3fhz 0.20 26.85 1.70 1072 108 29 29 0 5 No_SCOP_id ARGININE REPRESSOR & DNA & DNA
1737 3n6s 0.20 25.93 1.70 374 108 28 28 0 2 No_SCOP_id TRANSCRIPTION TERMINATION FACTOR, MITOCHONDRIAL & DNA & DNA
1738 3ulp 0.20 25.00 1.71 507 108 27 27 0 0 No_SCOP_id SINGLE-STRAND BINDING PROTEIN & DNA (35-MER)
1739 3bty 0.20 25.93 1.74 225 108 28 28 0 3 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1740 1pp7 0.20 25.93 1.76 139 108 28 27 1 1 a.4.5.44 FERREDOXIN INR & FERREDOXIN INR & 39 KDA INITIATOR BINDING PROTEIN
1741 2kdz 0.20 25.00 1.76 139 108 27 27 0 3 a.4.1.0 MYB24 & DNA & DNA
1742 1sax 0.20 27.78 1.78 290 108 30 30 0 1 a.4.5.39 DNA & METHICILLIN RESISTANCE REGULATORY PROTEIN MECI
1743 2oxv 0.20 27.78 1.79 274 108 30 30 0 2 c.52.1.1 TYPE II RESTRICTION ENZYME ECORI & DNA
1744 1je8 0.20 26.85 1.83 333 108 29 27 2 0 a.4.6.2 DNA & NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
1745 1lat 0.20 26.85 1.84 183 108 29 29 0 1 g.39.1.2 DNA & GLUCOCORTICOID RECEPTOR
1746 1eo4 0.20 26.85 1.85 492 108 29 29 0 2 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1747 3s57 0.20 26.85 1.85 232 108 29 29 0 4 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1748 3s5a 0.20 26.85 1.86 232 108 29 29 0 4 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1749 1suz 0.20 26.85 1.89 500 108 29 29 0 2 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1750 2b0e 0.20 27.78 1.89 491 108 30 29 1 3 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1751 3g9m 0.20 27.78 1.89 188 108 30 29 1 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1752 1dsz 0.20 28.70 1.90 189 108 31 29 2 2 g.39.1.2 DNA & RETINOIC ACID RECEPTOR RXR-ALPHA
1753 3jre 0.20 28.70 1.91 243 108 31 30 1 2 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1754 2i5w 0.20 28.70 1.92 332 108 31 31 0 4 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1755 3qyn 0.20 28.70 1.93 818 108 31 31 0 0 b.2.5.2 TUMOR PROTEIN 63 & DNA
1756 3g9o 0.20 27.78 1.94 182 108 30 29 1 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1757 3g9p 0.20 27.78 1.94 182 108 30 29 1 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1758 1lrr 0.20 28.70 1.98 282 108 31 31 0 2 d.228.1.1 DNA & SEQA PROTEIN
1759 2ddg 0.20 29.63 1.98 247 108 32 32 0 4 No_SCOP_id DNA & URACIL-DNA GLYCOSYLASE
1760 2ve9 0.20 28.70 1.99 432 108 31 31 0 1 a.4.5.67 DNA TRANSLOCASE FTSK & DNA & DNA
1761 2itl 0.20 30.56 2.05 283 108 33 31 2 4 d.89.1.1 24-NT PEN ELEMENT OF THE SV40 DNA ORIGIN & 24-NT PEN ELEMENT OF THE SV40 DNA ORIGIN & LARGE T ANTIGEN
1762 2xbm 0.20 33.33 2.12 1051 108 36 36 0 0 c.66.1.25 NONSTRUCTURAL PROTEIN NS5 & 5'-(*G3AP*GP*AP*AP*CP*CP*UP*GP*A)-3'
1763 3vh0 0.20 35.19 2.15 1308 108 38 38 0 1 No_SCOP_id UNCHARACTERIZED PROTEIN YNCE & DNA
1764 3g8s 0.20 33.33 2.16 972 108 36 31 5 6 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (5'-R(*AP*(A2M)P*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3') & GLMS RIBOZYME
1765 1jko 0.18 25.68 1.81 74 108 19 19 0 1 a.4.1.2 DNA & DNA-INVERTASE HIN
1766 1a1g 0.16 22.64 1.53 106 108 24 24 0 0 g.37.1.1 DNA & DSNR ZINC FINGER PEPTIDE
1767 2p7c 0.16 26.42 1.90 106 108 28 28 0 0 a.4.5.39 STRAND 1 OF TWELVE BASE-PAIR DNA & STRAND 2 OF TWELVE BASE-PAIR DNA & PENICILLINASE REPRESSOR
1768 1bc7 0.16 19.44 1.02 115 108 21 16 5 6 a.4.5.21 DNA & PROTEIN (ETS-DOMAIN PROTEIN)
1769 2i0q 0.16 21.30 1.13 688 108 23 23 0 1 b.40.4.3 DNA & TELOMERE-BINDING PROTEIN BETA SUBUNIT
1770 2pxv 0.16 21.30 1.34 110 108 23 22 1 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1771 3g38 0.16 23.15 1.35 273 108 25 25 0 2 d.151.1.0 EXODEOXYRIBONUCLEASE & DNA & DNA
1772 1g2d 0.16 21.30 1.36 241 108 23 23 0 2 k.12.1.1 DNA & TATA BOX ZINC FINGER PROTEIN
1773 1mj2 0.16 22.22 1.42 454 108 24 24 0 2 a.43.1.5 DNA & PROTEIN (METHIONINE REPRESSOR)
1774 1xsd 0.16 22.22 1.42 141 108 24 24 0 4 a.4.5.39 DNA & PENICILLINASE REPRESSOR
1775 1h9d 0.16 22.22 1.44 544 108 24 24 0 2 b.2.5.6;b.54.1.1 CORE-BINDING FACTOR ALPHA SUBUNIT1 & CORE-BINDING FACTOR CBF-BETA & DNA & DNA
1776 1y39 0.16 23.15 1.44 260 108 25 25 0 2 a.4.7.1 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN & 50S RIBOSOMAL PROTEIN L11
1777 2dr2 0.16 23.15 1.49 448 108 25 25 0 2 c.26.1.1 TRANSFER RNA-TRP & TRYPTOPHANYL-TRNA SYNTHETASE
1778 4a8s 0.16 24.07 1.49 1987 108 26 26 0 0 No_SCOP_id RNA-DIRECTED RNA POLYMERASE & DNA
1779 2o6m 0.16 22.22 1.50 366 108 24 24 0 2 d.4.1.3 INTRON-ENCODED ENDONUCLEASE I-PPOI & DNA
1780 3mkw 0.16 24.07 1.50 266 108 26 26 0 1 No_SCOP_id DNA & PROTEIN SOPB
1781 4hdu 0.16 23.15 1.53 133 108 25 25 0 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
1782 4a8w 0.16 23.15 1.54 1982 108 25 25 0 0 No_SCOP_id RNA-DIRECTED RNA POLYMERASE & DNA
1783 1i6u 0.16 23.15 1.55 326 108 25 24 1 4 d.140.1.1 16S RRNA FRAGMENT & 30S RIBOSOMAL PROTEIN S8P
1784 3clc 0.16 24.07 1.57 376 108 26 26 0 0 a.35.1.0 REGULATORY PROTEIN & 35-MER & 35-MER
1785 1ubd 0.16 24.07 1.58 154 108 26 20 6 1 g.37.1.1 DNA & PROTEIN (YY1 ZINC FINGER DOMAIN)
1786 2ltt 0.16 23.15 1.63 162 108 25 25 0 2 No_SCOP_id PUTATIVE UNCHARACTERIZED PROTEIN YDBC & DNA
1787 2fio 0.16 24.07 1.66 318 108 26 26 0 4 No_SCOP_id DNA (41-MER) & DNA (41-MER) & LATE GENES ACTIVATOR
1788 1qbj 0.16 25.00 1.72 212 108 27 27 0 1 a.4.5.19 DNA & PROTEIN (DOUBLE-STRANDED RNA SPECIFIC ADENOSINE DEAMINASE (ADAR1))
1789 1rvb 0.16 25.00 1.72 510 108 27 27 0 2 c.52.1.2 DNA & PROTEIN (ECO RV (E.C.3.1.21.4))
1790 2i3p 0.16 25.00 1.72 352 108 27 27 0 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1791 1g38 0.16 26.85 1.74 824 108 29 29 0 2 c.66.1.27;d.287.1.1 DNA & MODIFICATION METHYLASE TAQI
1792 3buc 0.16 25.93 1.75 225 108 28 28 0 3 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1793 3iwn 0.16 26.85 1.76 368 108 29 26 3 1 No_SCOP_id C-DI-GMP RIBOSWITCH & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
1794 3rzk 0.16 25.93 1.77 226 108 28 28 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1795 1p8k 0.16 25.93 1.78 314 108 28 28 0 2 d.95.2.1 DNA & INTRON-ENCODED ENDONUCLEASE I-ANII
1796 4hj7 0.16 25.93 1.79 147 108 28 27 1 0 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
1797 1oct 0.16 26.85 1.80 161 108 29 29 0 4 a.4.1.1;a.35.1.1 DNA & PROTEIN (OCT-1 POU DOMAIN)
1798 3jr9 0.16 28.70 1.82 243 108 31 31 0 1 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1799 3rzj 0.16 26.85 1.82 228 108 29 29 0 3 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1800 2b9s 0.16 26.85 1.83 522 108 29 28 1 2 No_SCOP_id DNA & DNA TOPOISOMERASE I-LIKE PROTEIN
1801 3jra 0.16 27.78 1.83 243 108 30 30 0 1 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1802 1rva 0.16 25.93 1.84 510 108 28 28 0 2 c.52.1.2 DNA & PROTEIN (ECO RV (E.C.3.1.21.4))
1803 3ih7 0.16 26.85 1.86 339 108 29 29 0 2 No_SCOP_id N-GLYCOSYLASE/DNA LYASE & DNA & DNA
1804 3irr 0.16 26.85 1.87 279 108 29 29 0 1 a.4.5.19 DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE & DNA & DNA
1805 3oyn 0.16 27.78 1.88 588 108 30 30 0 3 No_SCOP_id PFV INTEGRASE & DNA & DNA
1806 2du6 0.16 26.85 1.89 1070 108 29 29 0 0 No_SCOP_id TRNA & O-PHOSPHOSERYL-TRNA SYNTHETASE
1807 1n3e 0.16 27.78 1.90 700 108 30 29 1 2 d.95.2.1 DNA & DNA ENDONUCLEASE I-CREI
1808 3g8u 0.16 27.78 1.91 183 108 30 29 1 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1809 4fsj 0.16 27.78 1.93 1001 108 30 30 0 0 No_SCOP_id CAPSID PROTEIN BETA & CAPSID PROTEIN GAMMA & RANDOM CELLULAR RNA FRAGMENTS
1810 2noz 0.16 28.70 1.96 332 108 31 31 0 4 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1811 2h1k 0.16 28.70 1.97 178 108 31 29 2 5 a.4.1.0 15-MER DNA & 15-MER DNA & PANCREATIC AND DUODENAL HOMEOBOX 1
1812 1hu0 0.16 28.70 2.01 343 108 31 31 0 4 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE 1
1813 3kle 0.16 30.56 2.01 4098 108 33 33 0 0 No_SCOP_id REVERSE TRANSCRIPTASE/RIBONUCLEASE H & P51 RT & DNA (25-MER) & DNA
1814 1cl8 0.16 34.26 2.02 273 108 37 37 0 0 c.52.1.1 DNA & PROTEIN (ENDONUCLEASE)
1815 4aqu 0.16 31.48 2.03 351 108 34 34 0 2 No_SCOP_id DNA ENDONUCLEASE I-CREI & DNA & DNA
1816 1osl 0.16 29.63 2.04 160 108 32 30 2 3 a.35.1.5 LACTOSE OPERON REPRESSOR & DNA
1817 3oqg 0.16 31.48 2.05 367 108 34 34 0 3 No_SCOP_id HPY188I & DNA & DNA
1818 2dtu 0.16 36.11 2.14 3703 108 39 39 0 1 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
1819 1s10 0.16 32.41 2.20 371 108 35 35 0 5 d.240.1.1;e.8.1.7 DNA & DNA POLYMERASE IV
1820 2fmt 0.16 33.33 2.21 772 108 36 34 2 3 b.46.1.1;c.65.1.1 FORMYL-METHIONYL-TRNAFMET2 & METHIONYL-TRNA FMET FORMYLTRANSFERASE
1821 1t38 0.16 33.33 2.24 176 108 36 36 0 1 a.4.2.1;c.55.7.1 DNA & METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
1822 1mzp 0.12 18.52 0.84 268 108 20 20 0 3 e.24.1.1 FRAGMENT OF 23S RRNA & 50S RIBOSOMAL PROTEIN L1P
1823 3oa6 0.12 18.52 1.01 236 108 20 20 0 0 No_SCOP_id MALE-SPECIFIC LETHAL 3 HOMOLOG & DNA & DNA & H4 PEPTIDE MONOMETHYLATED AT LYSINE 20
1824 2wj0 0.12 21.30 1.35 298 108 23 22 1 3 No_SCOP_id ARCHAEAL HJC & HALF-JUNCTION & HALF-JUNCTION
1825 2nof 0.12 20.37 1.37 327 108 22 22 0 2 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1826 1mji 0.12 22.22 1.39 423 108 24 24 0 1 d.77.1.1 5S RRNA FRAGMENT & 50S RIBOSOMAL PROTEIN L5
1827 3dsd 0.12 21.30 1.41 689 108 23 23 0 1 d.159.1.4 DNA DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11 & DNA
1828 2jpa 0.12 22.22 1.52 147 108 24 24 0 1 No_SCOP_id WILMS TUMOR 1 & DNA & DNA
1829 4enm 0.12 23.15 1.56 133 108 25 25 0 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
1830 1x9n 0.12 25.00 1.57 665 108 27 27 0 0 a.235.1.1;b.40.4.6;d.142.2.1 DIDEOXY TERMINATED DNA & 5'-PHOSPHORYLATED DNA & TEMPLATE DNA & DNA LIGASE I
1831 1si3 0.12 22.22 1.62 126 108 24 24 0 3 b.34.14.1 5'-R(*CP*GP*UP*GP*AP*CP*UP*CP*U)-3' & EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1
1832 1lau 0.12 25.00 1.63 231 108 27 27 0 1 c.18.1.1 DNA & PROTEIN (URACIL-DNA GLYCOSYLASE (E.C.3.2.2.-))
1833 1eop 0.12 23.15 1.68 501 108 25 24 1 1 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
1834 1hc8 0.12 24.07 1.68 258 108 26 25 1 1 a.4.7.1 RIBOSOMAL PROTEIN L11 & 58 NUCLEOTIDE RIBOSOMAL 23S RNA DOMAIN
1835 2og0 0.12 24.07 1.71 139 108 26 24 2 4 a.6.1.7 DNA & EXCISIONASE
1836 1rrs 0.12 25.00 1.73 364 108 27 26 1 2 a.96.1.2;d.113.1.3 DNA & MUTY
1837 1s6m 0.12 25.00 1.73 309 108 27 27 0 2 d.89.1.5 DNA (25-MER) & TRWC
1838 2gat 0.12 26.53 1.74 98 108 26 26 0 2 g.39.1.1 DNA & ERYTHROID TRANSCRIPTION FACTOR GATA-1
1839 1mey 0.12 25.93 1.78 245 108 28 26 2 3 k.12.1.1 DNA & CONSENSUS ZINC FINGER
1840 1zg1 0.12 25.93 1.78 332 108 28 27 1 0 a.4.6.2 DNA & NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
1841 3btx 0.12 25.93 1.78 229 108 28 28 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1842 3h8r 0.12 25.93 1.78 228 108 28 28 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1843 2fcc 0.12 26.85 1.79 316 108 29 29 0 0 a.18.1.1 DNA & ENDONUCLEASE V
1844 1bvo 0.12 26.85 1.80 205 108 29 29 0 2 b.2.5.3 DNA DUPLEX & DNA DUPLEX & TRANSCRIPTION FACTOR GAMBIF1
1845 1k8w 0.12 25.93 1.83 325 108 28 28 0 1 b.122.1.1;d.265.1.2 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FHU) P*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' & TRNA PSEUDOURIDINE SYNTHASE B
1846 1cdw 0.12 25.93 1.85 211 108 28 28 0 1 d.129.1.1 DNA & PROTEIN (TATA BINDING PROTEIN (TBP))
1847 2ata 0.12 25.00 1.85 831 108 27 23 4 3 b.2.5.2 DNA & CELLULAR TUMOR ANTIGEN P53
1848 3jrh 0.12 28.70 1.88 243 108 31 31 0 1 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
1849 2pxk 0.12 26.85 1.90 110 108 29 29 0 2 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1850 3g97 0.12 26.85 1.93 177 108 29 29 0 1 g.39.1.2 GLUCOCORTICOID RECEPTOR & DNA & DNA
1851 1f0o 0.12 26.85 1.95 331 108 29 29 0 0 c.52.1.6 DNA & TYPE II RESTRICTION ENZYME PVUII
1852 3co7 0.12 25.93 1.95 238 108 28 17 11 4 a.4.5.14 FORKHEAD BOX PROTEIN O1 & DNA & DNA
1853 3exj 0.12 29.63 1.95 411 108 32 31 1 1 b.2.5.2 MOUSE P53 CORE DOMAIN & DNA & DNA
1854 2c7a 0.12 26.85 1.96 190 108 29 28 1 1 No_SCOP_id PROGESTERONE RECEPTOR & DNA & DNA
1855 1jbt 0.12 25.93 1.97 356 108 28 28 0 4 d.1.1.3 29-MER SARCIN/RICIN DOMAIN RNA ANALOG & RESTRICTOCIN
1856 1r0n 0.12 27.78 1.97 200 108 30 29 1 1 g.39.1.2 ECDSYONE RESPONSE ELEMENT & ECDYSONE RESPONSE ELEMENT & RETINOIC ACID RECEPTOR RXR-ALPHA & ECDYSONE RECEPTOR
1857 1lwt 0.12 28.70 1.99 514 108 31 30 1 2 b.86.1.2;d.95.2.2 PI-SCEI DNA SUBSTRATE TOP STRAND & PI-SCEI DNA SUBSTRATE BOTTOM STRAND & ENDONUCLEASE PI-SCEI
1858 2uzk 0.12 30.56 2.00 240 108 33 32 1 0 No_SCOP_id FORKHEAD BOX PROTEIN O3A & DNA & DNA
1859 1rta 0.12 27.78 2.04 128 108 30 30 0 3 d.5.1.1 DNA & PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5))
1860 3f21 0.12 28.70 2.04 212 108 31 31 0 1 a.4.5.19 DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE & DNA
1861 2dp6 0.12 29.63 2.06 247 108 32 30 2 4 No_SCOP_id DNA & URACIL-DNA GLYCOSYLASE
1862 3l3c 0.12 31.48 2.06 968 108 34 30 4 5 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (5'-R(*AP*(A2M)*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3') & GLMS RIBOZYME
1863 1hao 0.12 30.56 2.13 295 108 33 33 0 1 b.47.1.2 DNA & ALPHA-THROMBIN HEAVY CHAIN
1864 2wbu 0.10 24.76 1.80 105 108 26 26 0 1 g.37.1.0 KRUEPPEL-LIKE FACTOR 4 & DNA & DNA
1865 2wbs 0.10 27.72 1.96 101 108 28 27 1 2 g.37.1.0 KRUEPPEL-LIKE FACTOR 4 & DNA & DNA
1866 1f4s 0.09 21.18 1.40 85 108 18 16 2 4 g.38.1.1 DNA & ETHANOL REGULON TRANSCRIPTIONAL FACTOR
1867 1dux 0.08 19.44 1.16 224 108 21 16 5 6 a.4.5.21 DNA & ETS-DOMAIN PROTEIN ELK-1
1868 1mms 0.08 19.44 1.18 319 108 21 21 0 2 a.4.7.1;d.47.1.1 23S RIBOSOMAL RNA & PROTEIN (RIBOSOMAL PROTEIN L11)
1869 3us2 0.08 20.37 1.25 1576 108 22 22 0 0 No_SCOP_id TUMOR PROTEIN 63 & DNA & DNA
1870 4dl3 0.08 21.30 1.28 449 108 23 23 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1871 4ecr 0.08 21.30 1.29 449 108 23 23 0 1 No_SCOP_id DNA POLYMERASE ETA & DNA & DNA
1872 2ff0 0.08 21.30 1.35 132 108 23 23 0 3 No_SCOP_id STEROIDOGENIC FACTOR 1 & GGCTCAGGGCCACAG & CTGTGGCCCTGAGCC
1873 1bdt 0.08 20.37 1.43 249 108 22 17 5 4 a.43.1.1 DNA & PROTEIN (GENE-REGULATING PROTEIN ARC)
1874 2py5 0.08 23.15 1.43 1152 108 25 25 0 5 c.55.3.5;e.8.1.1 DNA & DNA POLYMERASE
1875 1tgh 0.08 21.30 1.47 204 108 23 23 0 2 d.129.1.1 DNA & PROTEIN (TATA BINDING PROTEIN (TBP))
1876 4ea4 0.08 23.15 1.47 160 108 25 25 0 4 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
1877 1hcq 0.08 22.22 1.53 362 108 24 24 0 1 g.39.1.2 DNA & PROTEIN (ESTROGEN RECEPTOR)
1878 3jxd 0.08 22.22 1.54 172 108 24 22 2 2 a.35.1.2 DNA & REPRESSOR PROTEIN C2
1879 3ubt 0.08 24.07 1.63 1020 108 26 26 0 2 c.66.1.26 MODIFICATION METHYLASE HAEIII & DNA
1880 2rbf 0.08 25.93 1.64 126 108 28 28 0 3 a.43.1.11 BIFUNCTIONAL PROTEIN PUTA & DNA & DNA
1881 4e9f 0.08 25.00 1.67 161 108 27 27 0 3 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
1882 1b01 0.08 26.85 1.73 124 108 29 27 2 3 a.43.1.3 DNA & TRANSCRIPTIONAL REPRESSOR COPG
1883 2q2u 0.08 25.00 1.73 1336 108 27 25 2 2 b.40.4.6;d.142.2.1 DNA & CHLORELLA VIRUS DNA LIGASE
1884 2gxb 0.08 24.07 1.76 138 108 26 26 0 1 a.4.5.19 5'-R(P*(DU)P*CP*GP*CP*GP*CP*G)-3' & DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE
1885 3h8x 0.08 25.93 1.78 228 108 28 28 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1886 2r2t 0.08 25.93 1.80 271 108 28 28 0 2 e.8.1.2 REVERSE TRANSCRIPTASE & DNA & DNA
1887 1zl3 0.08 25.93 1.81 323 108 28 28 0 1 b.122.1.1;d.265.1.2 5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*UP*(FLO) UP*CP*GP*AP*UP*CP*CP*CP*GP*UP*UP*GP*C)-3' & TRNA PSEUDOURIDINE SYNTHASE B
1888 3vd0 0.08 25.93 1.86 1702 108 28 28 0 2 b.2.5.2 TUMOR PROTEIN P73 & DNA
1889 3bu0 0.08 26.85 1.87 228 108 29 29 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1890 3rzh 0.08 26.85 1.87 226 108 29 29 0 2 No_SCOP_id ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 & DNA & DNA
1891 2gzk 0.08 27.78 1.88 191 108 30 30 0 3 a.21.1.1 SEX-DETERMINING REGION ON Y / HMGB1 & DNA & DNA
1892 1r4o 0.08 26.85 1.89 198 108 29 28 1 1 g.39.1.2 DNA & GLUCOCORTICOID RECEPTOR
1893 2w7n 0.08 25.93 1.89 255 108 28 28 0 2 No_SCOP_id TRFB TRANSCRIPTIONAL REPRESSOR PROTEIN & DNA & DNA
1894 1awc 0.08 27.78 1.92 300 108 30 30 0 3 a.4.5.21;d.211.1.1 DNA & PROTEIN (GA BINDING PROTEIN BETA 1)
1895 1po6 0.08 26.85 1.94 193 108 29 29 0 0 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
1896 1u1n 0.08 27.78 1.97 193 108 30 30 0 0 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
1897 1jbr 0.08 25.93 1.99 359 108 28 28 0 4 d.1.1.3 5'- R(*GP*CP*GP*CP*UP*CP*CP*UP*CP*AP*GP*UP*AP*CP*GP*AP*GP*(A23) )-3' & 5'-R(*GP*GP*AP*AP*CP*CP*GP*GP*AP*GP*CP*GP*C)-3' & 31-MER SRD RNA ANALOG & RESTRICTOCIN
1898 1yfh 0.08 28.70 2.02 537 108 31 31 0 1 a.4.2.1;c.55.7.1 DNA & METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE
1899 1hap 0.08 29.63 2.04 295 108 32 32 0 2 b.47.1.2 DNA & THROMBIN HEAVY CHAIN
1900 1lei 0.08 29.63 2.11 615 108 32 32 0 3 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR NF-KAPPA-B P50 SUBUNIT
1901 3gat 0.07 27.55 1.90 98 108 27 27 0 2 g.39.1.1 DNA & ERYTHROID TRANSCRIPTION FACTOR GATA-1
1902 2l4l 0.07 30.61 2.13 49 108 15 15 0 0 g.40.1.1 HIV-1 NUCLEOCAPSID PROTEIN NCP7 & DNA
1903 2o8k 0.05 29.67 1.99 91 108 27 26 1 1 No_SCOP_id RNA POLYMERASE SIGMA FACTOR RPON & DNA & DNA
1904 2lev 0.04 24.14 1.81 87 108 21 20 1 1 No_SCOP_id LER & DNA & DNA
1905 1yo5 0.04 20.37 1.19 114 108 22 16 6 6 a.4.5.21 ENHANCER SITE OF PROSTATE SPECIFIC ANTIGEN PROMOTER REGION & ENHANCER SITE OF PROSTATE SPECIFIC ANTIGEN PROMOTER REGION & SAM POINTED DOMAIN CONTAINING ETS TRANSCRIPTION FACTOR
1906 1ztg 0.04 20.37 1.38 305 108 22 21 1 2 d.51.1.1 POLY(RC)-BINDING PROTEIN 1 & DNA
1907 1m5k 0.04 20.37 1.39 404 108 22 20 2 0 d.58.7.1 RNA INHIBITOR SUBSTRATE & RNA HAIRPIN RIBOZYME & PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A)
1908 1zx4 0.04 24.07 1.50 394 108 26 25 1 1 No_SCOP_id PARS-SMALL DNA CENTROMERE SITE & PARS-SMALL DNA CENTROMERE SITE & PLASMID PARTITION PAR B PROTEIN
1909 2gie 0.04 23.15 1.54 1078 108 25 25 0 1 c.52.1.19 DNA & TYPE II RESTRICTION ENZYME HINCII
1910 3eyi 0.04 22.22 1.56 144 108 24 24 0 2 No_SCOP_id Z-DNA-BINDING PROTEIN 1 & 5'-TCGCGCG-3'
1911 3jxc 0.04 23.15 1.57 172 108 25 22 3 2 a.35.1.2 DNA & REPRESSOR PROTEIN C2
1912 1u78 0.04 21.30 1.58 155 108 23 23 0 4 a.4.1.2 26-MER & 26-MER & TRANSPOSABLE ELEMENT TC3 TRANSPOSASE
1913 2pxb 0.04 24.07 1.59 110 108 26 26 0 1 a.36.1.1 SIGNAL RECOGNITION PARTICLE PROTEIN & 4.5 S RNA
1914 3ukg 0.04 22.22 1.60 285 108 24 24 0 2 a.4.1.6;a.4.1.0 DNA-BINDING PROTEIN RAP1 & TELOMERIC DNA & TELOMERIC DNA
1915 1mdm 0.04 23.15 1.65 305 108 25 25 0 3 a.4.1.5;a.4.5.21 PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER & PAX5/ETS BINDING SITE ON THE MB-1 PROMOTER & PAIRED BOX PROTEIN PAX-5 & C-ETS-1 PROTEIN
1916 3jtg 0.04 23.15 1.66 127 108 25 25 0 2 a.4.5.21 ETS-RELATED TRANSCRIPTION FACTOR ELF-3 & DNA & DNA
1917 1rg2 0.04 24.07 1.69 864 108 26 26 0 3 d.136.1.3 DNA & TYROSYL-DNA PHOSPHODIESTERASE 1
1918 2a66 0.04 25.00 1.71 119 108 27 27 0 0 g.39.1.0 DNA & ORPHAN NUCLEAR RECEPTOR NR5A2
1919 2kej 0.04 23.15 1.72 170 108 25 25 0 1 a.35.1.5 LACTOSE OPERON REPRESSOR & DNA & DNA
1920 2up1 0.04 24.07 1.75 194 108 26 26 0 1 d.58.7.1 DNA & PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
1921 1jj4 0.04 24.07 1.77 182 108 26 26 0 0 d.58.8.1 E2 BINDING SITE DNA & REGULATORY PROTEIN E2
1922 2ccz 0.04 25.00 1.81 254 108 27 27 0 0 b.40.4.3 PRIMOSOMAL REPLICATION PROTEIN N & DNA
1923 3us1 0.04 25.93 1.83 397 108 28 28 0 0 b.2.5.2 TUMOR PROTEIN 63 & DNA
1924 1sfu 0.04 25.93 1.84 152 108 28 28 0 2 a.4.5.19 DNA & 34L PROTEIN
1925 1az0 0.04 25.93 1.87 488 108 28 28 0 0 c.52.1.2 DNA & PROTEIN (TYPE II RESTRICTION ENZYME ECORV)
1926 1l3l 0.04 26.85 1.88 974 108 29 28 1 2 a.4.6.2;d.110.5.1 DNA & TRANSCRIPTIONAL ACTIVATOR PROTEIN TRAR
1927 1fn7 0.04 27.78 1.89 343 108 30 30 0 4 a.96.1.3;d.129.1.2 DNA & 8-OXOGUANINE DNA GLYCOSYLASE 1
1928 3bdn 0.04 27.78 1.89 506 108 30 30 0 2 No_SCOP_id LAMBDA REPRESSOR & DNA & DNA
1929 2ahi 0.04 25.93 1.90 830 108 28 22 6 4 b.2.5.2 DNA & CELLULAR TUMOR ANTIGEN P53
1930 3c25 0.04 25.93 1.90 751 108 28 28 0 3 No_SCOP_id NOTI RESTRICTION ENDONUCLEASE & DNA & DNA
1931 3s8q 0.04 25.93 1.90 191 108 28 28 0 3 a.35.1.0 R-M CONTROLLER PROTEIN & DNA & DNA
1932 1yqr 0.04 27.78 1.91 341 108 30 30 0 0 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1933 1yql 0.04 27.78 1.92 338 108 30 30 0 4 a.96.1.3;d.129.1.2 DNA & N-GLYCOSYLASE/DNA LYASE
1934 3bo4 0.04 26.85 1.92 315 108 29 28 1 1 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & GROUP I INTRON P9 & DNA/RNA (5'- R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*A)-D(P*DG)- 3') & DNA/RNA (5'-R(*CP*A)-D(P*DU)- R(P*AP*CP*GP*GP*CP*C)-3')
1935 3udg 0.04 25.00 1.93 664 108 27 26 1 2 No_SCOP_id SINGLE-STRANDED DNA-BINDING PROTEIN & DNA
1936 3hqf 0.04 26.85 1.94 191 108 29 29 0 0 No_SCOP_id RESTRICTION ENDONUCLEASE & DNA & DNA
1937 3g73 0.04 27.78 1.99 227 108 30 28 2 2 No_SCOP_id FORKHEAD BOX PROTEIN M1 & DNA & DNA
1938 3rn5 0.04 28.70 1.99 851 108 31 31 0 2 b.40.16.0 INTERFERON-INDUCIBLE PROTEIN AIM2 & DNA & DNA
1939 1rh6 0.04 25.93 2.00 135 108 28 28 0 2 a.6.1.7 DNA & EXCISIONASE
1940 4hj5 0.04 27.78 2.04 147 108 30 28 2 0 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
1941 4fpv 0.04 27.78 2.07 512 108 30 30 0 4 No_SCOP_id TYROSYL-DNA PHOSPHODIESTERASE 2 & DNA
1942 2o6g 0.04 31.48 2.10 550 108 34 34 0 2 a.4.5.23 INTERFERON-B ENHANCER & INTERFERON-B ENHANCER & INTERFERON REGULATORY FACTOR 3
1943 4f6m 0.04 31.48 2.10 154 108 34 32 2 2 No_SCOP_id TRANSCRIPTIONAL REGULATOR KAISO & DNA & DNA
1944 4enn 0.04 30.56 2.13 264 108 33 32 1 3 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & RNA (5'-R(*GP*CP*CP*AP*TP*GP*(C6G)P*CP*TP*AP*GP*TP*A)-3')
1945 1noy 0.04 30.56 2.14 721 108 33 33 0 4 c.55.3.5 DNA & PROTEIN (DNA POLYMERASE (E.C.2.7.7.7))
1946 2hvr 0.04 35.19 2.23 732 108 38 38 0 2 No_SCOP_id DNA & T4 RNA LIGASE 2
1947 1jj8 0.03 21.33 1.47 75 108 16 16 0 3 a.4.1.2 DNA & DNA-INVERTASE HIN
1948 1tn9 0.00 29.47 2.16 95 108 28 28 0 0 d.10.1.1 PROTEIN (INTEGRASE) & DNA & DNA
1949 1m5v -0.00 20.37 1.38 412 108 22 20 2 0 d.58.7.1 RNA INHIBITOR SUBSTRATE & RNA INHIBITOR SUBSTRATE & RNA HAIRPIN RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
1950 3mxh -0.00 20.37 1.46 178 108 22 21 1 0 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & C-DI-GMP RIBOSWITCH
1951 1m5o -0.00 21.30 1.47 411 108 23 20 3 0 d.58.7.1 RNA SUBSTRATE & RNA HAIRPIN RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
1952 3kxt -0.00 20.83 1.51 72 108 15 15 0 0 No_SCOP_id CHROMATIN PROTEIN CREN7 & DNA
1953 2bnz -0.00 22.22 1.57 244 108 24 23 1 1 a.43.1.4 ORF OMEGA & DNA & DNA
1954 2uvw -0.00 22.22 1.57 371 108 24 24 0 1 d.240.1.0;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1955 1j3e -0.00 21.30 1.58 134 108 23 23 0 3 d.228.1.1 DNA & SEQA PROTEIN
1956 2rba -0.00 22.22 1.59 409 108 24 24 0 0 No_SCOP_id G/T MISMATCH-SPECIFIC THYMINE DNA GLYCOSYLASE & DNA & DNA
1957 2jp9 -0.00 23.15 1.60 153 108 25 25 0 1 No_SCOP_id WILMS TUMOR 1 & DNA & DNA
1958 3igk -0.00 23.15 1.61 208 108 25 25 0 2 b.2.5.2 CELLULAR TUMOR ANTIGEN P53 & DNA
1959 3bq2 -0.00 23.15 1.66 364 108 25 25 0 2 d.240.1.1;e.8.1.7 DNA POLYMERASE IV & DNA & DNA
1960 3pvi -0.00 24.07 1.69 338 108 26 26 0 3 c.52.1.6 DNA & PROTEIN (PVUII ENDONUCLEASE)
1961 3iev -0.00 23.15 1.70 313 108 25 25 0 2 No_SCOP_id GTP-BINDING PROTEIN ERA & 5'-R(P*AP*UP*CP*AP*CP*CP*UP*CP*CP*UP*UP*A)-3'
1962 3odc -0.00 21.30 1.70 225 108 23 22 1 2 No_SCOP_id POLY [ADP-RIBOSE] POLYMERASE 1 & DNA & DNA
1963 1zet -0.00 24.07 1.71 411 108 26 26 0 1 d.240.1.1;e.8.1.7 DNA & POLYMERASE (DNA DIRECTED) IOTA
1964 4evv -0.00 25.00 1.77 167 108 27 27 0 4 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
1965 2ayg -0.00 22.22 1.78 210 108 24 17 7 4 d.58.8.1 DNA & REGULATORY PROTEIN E2
1966 2oaa -0.00 24.07 1.79 538 108 26 25 1 1 No_SCOP_id DNA & R.MVAI
1967 3fsp -0.00 25.93 1.85 373 108 28 28 0 1 No_SCOP_id A/G-SPECIFIC ADENINE GLYCOSYLASE & DNA & DNA
1968 3a5u -0.00 25.00 1.88 256 108 27 25 2 1 b.40.4.3 SINGLE-STRANDED DNA-BINDING PROTEIN & DNA (31-MER)
1969 4ea5 -0.00 25.93 1.88 156 108 28 28 0 3 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
1970 1oup -0.00 26.85 1.94 455 108 29 29 0 1 d.4.1.6 DNA & NUCLEASE
1971 4aae -0.00 28.70 2.02 353 108 31 31 0 1 No_SCOP_id DNA ENDONUCLEASE I-CREI & 24MER DNA & 24MER DNA
1972 3irw -0.00 27.78 2.10 180 108 30 28 2 1 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & C-DI-GMP RIBOSWITCH
1973 2i13 -0.00 29.63 2.16 383 108 32 21 11 3 k.12.1.1 DNA & AART
1974 3kde -0.03 25.00 1.87 92 108 23 23 0 2 No_SCOP_id DNA & TRANSPOSABLE ELEMENT P TRANSPOSASE
1975 2ky8 -0.03 29.55 2.12 88 108 26 24 2 3 d.10.1.0 METHYL-CPG-BINDING DOMAIN PROTEIN 2 & DNA & DNA
1976 3gxq -0.04 18.52 1.16 128 108 20 20 0 1 No_SCOP_id PUTATIVE REGULATOR OF TRANSFER GENES ARTA & DNA & DNA
1977 3us0 -0.04 18.52 1.20 820 108 20 15 5 3 b.2.5.2 TUMOR PROTEIN 63 & DNA
1978 1wpu -0.04 20.37 1.48 308 108 22 22 0 2 d.275.1.1 5'-R(*UP*UP*GP*AP*GP*UP*U)-3' & HUT OPERON POSITIVE REGULATORY PROTEIN
1979 1k7a -0.04 21.30 1.50 267 108 23 23 0 3 a.4.5.21 DNA & C-ETS-1 PROTEIN
1980 1sj3 -0.04 21.30 1.54 168 108 23 21 2 0 d.58.7.1 PRECURSOR FORM OF THE HEPATITIS DELTA VIRUS RIBOZYME & SMALL NUCLEAR RIBONUCLEOPROTEIN A
1981 1vbx -0.04 21.30 1.54 168 108 23 21 2 0 d.58.7.1 HEPATITIS DELTA VIRUS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
1982 1k79 -0.04 21.30 1.58 268 108 23 23 0 4 a.4.5.21 DNA & C-ETS-1 PROTEIN
1983 2ayb -0.04 21.30 1.58 206 108 23 17 6 3 d.58.8.1 DNA & REGULATORY PROTEIN E2
1984 2hdc -0.04 22.22 1.63 131 108 24 24 0 2 a.4.5.14 PROTEIN (TRANSCRIPTION FACTOR) & DNA & DNA
1985 1si2 -0.04 22.22 1.66 129 108 24 24 0 2 b.34.14.1 5'-R(*CP*GP*UP*GP*AP*CP*U)-D(P*CP*T)-3' & EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1
1986 1par -0.04 23.15 1.70 252 108 25 25 0 0 a.43.1.1 DNA & PROTEIN (ARC REPRESSOR)
1987 1p5w -0.04 23.15 1.73 554 108 25 25 0 0 b.121.5.2 COAT PROTEIN VP2 & DNA
1988 3zvk -0.04 23.15 1.78 852 108 25 24 1 1 No_SCOP_id TOXIN OF TOXIN-ANTITOXIN SYSTEM & ANTITOXIN OF TOXIN-ANTITOXIN SYSTEM VAPB & DNA & DNA
1989 2c6y -0.04 24.07 1.80 225 108 26 26 0 1 a.4.5.14 FORKHEAD BOX PROTEIN K2 & INTERLEUKIN 2 PROMOTOR & INTERLEUKIN 2 PROMOTOR
1990 2kei -0.04 22.22 1.80 170 108 24 23 1 1 a.35.1.5 LACTOSE OPERON REPRESSOR & DNA & DNA
1991 3pky -0.04 25.93 1.85 584 108 28 28 0 1 No_SCOP_id PUTATIVE DNA LIGASE-LIKE PROTEIN & DNA & DNA
1992 4fvu -0.04 25.00 1.87 224 108 27 27 0 0 No_SCOP_id NUCLEOPROTEIN & RNA (5'-R(*GP*GP*AP*GP*GP*GP*AP*G)-3') & RNA (5'-R(*CP*UP*CP*CP*CP*UP*CP*C)-3')
1993 3qws -0.04 25.93 1.97 159 108 28 27 1 0 No_SCOP_id GP39 & DNA
1994 3u58 -0.04 25.93 1.97 860 108 28 28 0 3 No_SCOP_id TETRAHYMENA TEB1 AB & DNA
1995 1xs9 -0.04 25.93 2.00 250 108 28 28 0 2 i.11.1.1 MULTIPLE ANTIBIOTIC RESISTANCE PROTEIN MARA & DNA & DNA & DNA-DIRECTED RNA POLYMERASE ALPHA CHAIN
1996 3h0d -0.04 29.63 2.08 342 108 32 32 0 3 No_SCOP_id CTSR & DNA (26-MER) & DNA (26-MER)
1997 3or3 -0.04 33.33 2.38 362 108 36 36 0 1 No_SCOP_id RESTRICTION ENDONUCLEASE HPY188I & DNA & DNA & DNA & DNA
1998 1gau -0.06 19.74 1.28 76 108 15 15 0 2 g.39.1.1 DNA & ERYTHROID TRANSCRIPTION FACTOR GATA-1
1999 3qmi -0.06 21.05 1.39 76 108 16 9 7 5 No_SCOP_id CPG-BINDING PROTEIN & DNA
2000 3hts -0.07 22.34 1.76 94 108 21 21 0 2 a.4.5.22 DNA & HEAT SHOCK TRANSCRIPTION FACTOR
2001 4gat -0.07 21.74 1.71 92 108 20 20 0 0 g.39.1.1 DNA & NITROGEN REGULATORY PROTEIN AREA
2002 1dnk -0.09 18.52 1.19 265 108 20 20 0 3 d.151.1.1 DNA & PROTEIN (DEOXYRIBONUCLEASE I (DNASE I) (E.C.3.1.21.1))
2003 1jid -0.09 18.52 1.20 140 108 20 20 0 1 d.201.1.1 HELIX 6 OF HUMAN SRP RNA & SIGNAL RECOGNITION PARTICLE 19 KDA PROTEIN
2004 3kjp -0.09 18.52 1.44 304 108 20 20 0 0 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2005 3l2c -0.09 21.30 1.47 111 108 23 16 7 1 a.4.5.14 FOXO CONSENSUS BINDING SEQUENCE, PLUS STRAND & FOXO CONSENSUS BINDING SEQUENCE, MINUS STRAND & FORKHEAD BOX PROTEIN O4
2006 3coa -0.09 20.37 1.49 237 108 22 22 0 1 a.4.5.14 FORKHEAD BOX PROTEIN O1 & DNA & DNA
2007 1vby -0.09 19.44 1.55 168 108 21 21 0 2 d.58.7.1 HEPATITIS DELTA VIRUS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2008 3jri -0.09 24.07 1.72 243 108 26 26 0 1 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
2009 4hik -0.09 24.07 1.80 144 108 26 26 0 1 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2010 1wmq -0.09 24.07 1.81 300 108 26 26 0 2 d.275.1.1 5'-R(P*UP*UP*UP*AP*GP*UP*U)-3' & HUT OPERON POSITIVE REGULATORY PROTEIN
2011 3fde -0.09 23.15 1.81 461 108 25 25 0 2 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
2012 2axy -0.09 23.15 1.83 297 108 25 25 0 3 d.51.1.1 C-RICH STRAND OF HUMAN TELOMERIC DNA & POLY(RC)-BINDING PROTEIN 2
2013 1dct -0.09 25.00 1.90 713 108 27 27 0 2 c.66.1.26 DNA & PROTEIN (MODIFICATION METHYLASE HAEIII)
2014 2evj -0.09 25.00 1.90 317 108 27 27 0 3 b.2.5.7 DNA & NDT80 PROTEIN
2015 1pvi -0.09 24.07 1.92 338 108 26 26 0 2 c.52.1.6 DNA & PROTEIN (PVUII (E.C.3.1.21.4))
2016 3eeo -0.09 26.85 1.99 350 108 29 27 2 3 c.66.1.26 DNA & MODIFICATION METHYLASE HHAI
2017 1m8w -0.09 26.85 2.00 711 108 29 29 0 2 a.118.1.8 5'-R(P*UP*UP*GP*UP*AP*UP*AP*U)-3' & 5'-R(P*UP*GP*UP*AP*UP*AP*U)-3' & 5'-R(P*UP*UP*GP*UP*CP*CP*AP*G)-3' & 5'-R(P*UP*GP*UP*CP*CP*AP*G)-3' & PUMILIO 1
2018 2czj -0.09 26.85 2.07 722 108 29 25 4 1 b.111.1.1 SSRA-BINDING PROTEIN & TMRNA (63-MER)
2019 3gib -0.09 27.78 2.12 200 108 30 30 0 3 b.38.1.2 PROTEIN HFQ & 5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*A)-3'
2020 2qoj -0.09 30.56 2.16 311 108 33 32 1 0 d.95.2.1 INTRON-ENCODED DNA ENDONUCLEASE I-ANII & I-ANII DNA TARGET SEQ1 & I-ANII DNA TARGET SEQ2
2021 1laj -0.09 31.48 2.19 543 108 34 34 0 2 b.121.4.5 CAPSID PROTEIN & 5'-R(*AP*AP*A)-3'
2022 3rnu -0.09 30.56 2.21 830 108 33 33 0 2 b.40.16.1 GAMMA-INTERFERON-INDUCIBLE PROTEIN 16 & DNA & DNA
2023 1a1f -0.09 18.87 1.29 106 108 20 20 0 2 g.37.1.1 DNA & THREE-FINGER ZIF268 PEPTIDE
2024 1b69 -0.09 22.11 1.71 95 108 21 21 0 2 d.10.1.1 PROTEIN (INTEGRASE) & DNA & DNA
2025 2a9x -0.09 23.81 1.69 42 108 10 10 0 1 No_SCOP_id BIV-2 CYCLIC PEPTIDE & BIV TAR RNA
2026 1aay -0.11 19.63 1.48 107 108 21 21 0 1 g.37.1.1 DNA & PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
2027 2kv6 -0.13 14.81 0.45 27 108 4 4 0 1 No_SCOP_id DNA & KWKK TETRAPEPTIDE
2028 4e9h -0.13 19.44 1.38 160 108 21 21 0 2 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
2029 3mht -0.13 19.44 1.39 352 108 21 21 0 0 c.66.1.26 DNA & PROTEIN (HHAI METHYLTRANSFERASE (E.C.2.1.1.73))
2030 1sj4 -0.13 19.44 1.40 168 108 21 15 6 1 d.58.7.1 PRECURSOR FORM OF THE HEPATITIS DELTA VIRUS RIBOZYME & SMALL NUCLEAR RIBONUCLEOPROTEIN A
2031 1vtn -0.13 18.52 1.43 128 108 20 20 0 0 a.4.5.14 DNA & HNF-3/FORK HEAD DNA-RECOGNITION MOTIF
2032 1cit -0.13 18.52 1.46 121 108 20 20 0 2 g.39.1.2 DNA & PROTEIN (ORPHAN NUCLEAR RECEPTOR NGFI-B)
2033 1drz -0.13 20.37 1.54 163 108 22 20 2 0 d.58.7.1 RNA (HEPATITIS DELTA VIRUS GENOMIC RIBOZYME) & PROTEIN (U1 SMALL RIBONUCLEOPROTEIN A)
2034 1qri -0.13 21.30 1.54 274 108 23 23 0 3 c.52.1.1 DNA & ECO RI ENDONCULEASE
2035 3mut -0.13 20.37 1.56 181 108 22 22 0 2 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & G20A/C92U MUTANT C-DI-GMP RIBOSWITCH
2036 1vc0 -0.13 20.37 1.57 168 108 22 20 2 0 d.58.7.1 HEPATITIS DELTA VIRUS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2037 1vc6 -0.13 21.30 1.59 167 108 23 21 2 0 d.58.7.1 HEPATITIS DELTA VIRUS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2038 1vbz -0.13 20.37 1.68 168 108 22 22 0 2 d.58.7.1 HEPATITIS DELTA VIRUS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2039 1sjf -0.13 20.37 1.70 169 108 22 22 0 2 d.58.7.1 HEPATITIS DELTA VIRUS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2040 3osg -0.13 23.15 1.73 261 108 25 25 0 2 a.4.1.0 MYB21 & DNA & DNA
2041 3mur -0.13 22.22 1.74 181 108 24 20 4 0 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & C92U MUTANT C-DI-GMP RIBOSWITCH
2042 1jmc -0.13 23.15 1.81 246 108 25 25 0 0 b.40.4.3 DNA & PROTEIN (REPLICATION PROTEIN A (RPA))
2043 3qi5 -0.13 25.00 1.90 464 108 27 27 0 2 b.46.1.2 DNA-3-METHYLADENINE GLYCOSYLASE & DNA & DNA
2044 3f23 -0.13 25.00 1.93 211 108 27 27 0 2 a.4.5.19 DOUBLE-STRANDED RNA-SPECIFIC ADENOSINE DEAMINASE & DNA
2045 1ttu -0.13 26.85 1.97 465 108 29 29 0 2 b.1.18.1;b.2.5.8;b.42.7.1 DNA & LIN-12 AND GLP-1 TRANSCRIPTIONAL REGULATOR
2046 2b0d -0.13 25.93 1.99 497 108 28 28 0 0 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
2047 3vd2 -0.13 25.93 2.05 1291 108 28 28 0 2 No_SCOP_id TUMOR PROTEIN P73 & DNA
2048 3qmh -0.14 22.08 1.64 77 108 17 10 7 4 No_SCOP_id CPG-BINDING PROTEIN & DNA
2049 1jk1 -0.15 19.63 1.50 107 108 21 21 0 1 g.37.1.1 DNA & ZIF268
2050 3ol9 -0.17 18.52 1.34 1984 108 20 20 0 3 e.8.1.4 POLYMERASE & RNA (5'- R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*GP*UP*CP*CP*GP* GP*AP*AP*A)-3') & RNA (5'-R(*GP*CP*CP*CP*GP*GP*AP*CP*GP*AP*GP*AP*GP*AP*(O2C) )-3') & RNA (5'-R(*GP*GP*GP*AP*GP*AP*UP*GP*A)-3')
2051 1glu -0.17 18.52 1.41 200 108 20 20 0 1 g.39.1.2 DNA & PROTEIN (GLUCOCORTICOID RECEPTOR)
2052 2ge5 -0.17 21.30 1.47 460 108 23 23 0 2 c.52.1.2 DNA & TYPE II RESTRICTION ENZYME ECORV
2053 3khc -0.17 21.30 1.56 425 108 23 23 0 1 b.82.2.10 ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB & DNA & DNA
2054 1rcn -0.17 19.44 1.57 128 108 21 21 0 3 d.5.1.1 DNA & PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5))
2055 2oj3 -0.17 19.44 1.58 168 108 21 21 0 2 d.58.7.1 HDV RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2056 1keg -0.17 21.30 1.64 435 108 23 23 0 0 b.1.1.1;b.1.1.2 DNA & ANTI-(6-4) PHOTOPRODUCT ANTIBODY 64M-2 FAB (HEAVY CHAIN)
2057 2kek -0.17 23.15 1.66 170 108 25 22 3 2 a.35.1.5 LACTOSE OPERON REPRESSOR & DNA & DNA
2058 2prt -0.17 20.37 1.69 141 108 22 22 0 0 No_SCOP_id WILMS TUMOR 1 & DNA & DNA
2059 2r1j -0.17 22.22 1.70 172 108 24 21 3 2 a.35.1.2 DNA & REPRESSOR PROTEIN C2
2060 3agv -0.17 20.37 1.72 410 108 22 22 0 0 b.1.1.2 IG GAMMA-1 CHAIN C REGION & 5'-R(*GP*GP*AP*GP*GP*(UFT)P*GP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ) P*GP*AP*AP*A*GP*GP*AP*AP*(CFZ)P*(UFT)P*(CFZ)P*(CFZ)P*A)-3'
2061 1mse -0.17 19.44 1.78 127 108 21 21 0 3 a.4.1.3 DNA & C-MYB DNA-BINDING DOMAIN
2062 1ijs -0.17 24.07 1.97 559 108 26 26 0 0 b.121.5.2 PROTEIN (PARVOVIRUS COAT PROTEIN) & DNA & DNA
2063 2gli -0.17 24.07 1.97 197 108 26 25 1 1 g.37.1.1 DNA & PROTEIN (FIVE-FINGER GLI)
2064 1pgz -0.17 23.15 1.98 192 108 25 25 0 1 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2065 1per -0.17 25.93 2.01 166 108 28 24 4 3 a.35.1.2 DNA & PROTEIN (434 REPRESSOR)
2066 3vdy -0.17 25.93 2.02 222 108 28 28 0 1 No_SCOP_id SINGLE-STRANDED DNA-BINDING PROTEIN SSBB & DNA
2067 1by4 -0.17 26.85 2.09 380 108 29 26 3 1 g.39.1.2 PROTEIN (RETINOIC ACID RECEPTOR RXR-ALPHA) & DNA & DNA
2068 1a1i -0.19 18.69 1.32 107 108 20 20 0 1 g.37.1.1 DNA & RADR ZIF268 ZINC FINGER PEPTIDE
2069 4hp3 -0.21 21.33 1.65 75 108 16 16 0 0 No_SCOP_id DNA & LOC100036628 PROTEIN
2070 3g9c -0.21 18.52 1.43 962 108 20 15 5 1 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3') & GLMS RIBOZYME
2071 1cbv -0.21 18.52 1.58 441 108 20 20 0 1 b.1.1.1;b.1.1.2 DNA & PROTEIN (FAB (BV04-01) AUTOANTIBODY-HEAVY CHAIN)
2072 1qrh -0.21 20.37 1.69 274 108 22 22 0 2 c.52.1.1 5'-(TP*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G*)-3' & ECO RI ENDONCULEASE
2073 1i8m -0.21 21.30 1.72 858 108 23 23 0 0 b.1.1.1;b.1.1.2 DNA & ANTIBODY HEAVY CHAIN FAB
2074 3uk3 -0.21 22.22 1.76 146 108 24 22 2 2 No_SCOP_id DNA & ZINC FINGER PROTEIN 217
2075 2ady -0.21 20.37 1.77 419 108 22 22 0 1 b.2.5.2 DNA & CELLULAR TUMOR ANTIGEN P53
2076 1ksx -0.21 22.22 1.81 1244 108 24 24 0 2 d.89.1.2 E1 RECOGNITION SEQUENCE & REPLICATION PROTEIN E1
2077 1pzu -0.21 23.15 1.87 1740 108 25 24 1 0 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2
2078 1tsr -0.21 23.15 1.98 627 108 25 25 0 0 b.2.5.2 DNA & PROTEIN (P53 TUMOR SUPPRESSOR)
2079 1tup -0.21 23.15 1.98 627 108 25 25 0 0 b.2.5.2 DNA & PROTEIN (P53 TUMOR SUPPRESSOR )
2080 2k7f -0.21 24.07 1.99 133 108 26 26 0 1 No_SCOP_id REPLICATION FACTOR C SUBUNIT 1 & DNA & DNA
2081 1fym -0.21 25.00 2.00 188 108 27 27 0 2 a.4.5.22 TAIL-TO-TAIL HSE & HEAT SHOCK TRANSCRIPTION PROTEIN
2082 4dih -0.21 25.93 2.05 291 108 28 28 0 3 No_SCOP_id PROTHROMBIN & PROTHROMBIN & THROMBIN BINDING APTAMER
2083 1d02 -0.21 28.70 2.11 417 108 31 31 0 2 c.52.1.8 DNA & TYPE II RESTRICTION ENZYME MUNI
2084 2jx1 -0.23 15.79 1.16 57 108 9 9 0 0 No_SCOP_id MYELIN TRANSCRIPTION FACTOR 1 & DNA & DNA
2085 3qmg -0.23 23.68 1.79 76 108 18 11 7 4 No_SCOP_id CPG-BINDING PROTEIN & DNA & DNA
2086 1a1l -0.23 16.82 1.23 107 108 18 18 0 2 g.37.1.1 DNA & PROTEIN (ZIF268 ZINC FINGER PEPTIDE)
2087 2pfj -0.25 17.59 1.20 313 108 19 19 0 1 c.52.1.17 ENDODEOXYRIBONUCLEASE 1 & 27-MER & 27-MER
2088 2oih -0.25 16.67 1.24 168 108 18 18 0 1 d.58.7.1 HDV RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2089 1rpe -0.25 19.44 1.37 166 108 21 21 0 2 a.35.1.2 DNA & PROTEIN (434 REPRESSOR)
2090 3p49 -0.25 20.37 1.67 261 108 22 21 1 0 No_SCOP_id GLYCINE RIBOSWITCH & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2091 2stw -0.25 20.37 1.68 130 108 22 22 0 1 a.4.5.21 DNA & ETS1
2092 3fte -0.25 20.37 1.72 277 108 22 22 0 1 No_SCOP_id DIMETHYLADENOSINE TRANSFERASE & 5'-R(P*AP*AP*CP*CP*GP*UP*AP*GP*GP*GP*GP*AP*AP*CP*CP*UP*GP*C P*GP*GP*UP*U)-3'
2093 1r7m -0.25 22.22 1.75 542 108 24 24 0 2 d.95.2.1 DNA & INTRON-ENCODED ENDONUCLEASE I-SCEI
2094 1t2t -0.25 19.44 1.77 138 108 21 12 9 1 d.285.1.1 DNA & INTRON-ASSOCIATED ENDONUCLEASE 1
2095 2x6v -0.25 20.37 1.77 370 108 22 22 0 2 b.2.5.4 T-BOX TRANSCRIPTION FACTOR TBX5 & DNA & DNA
2096 3gx4 -0.25 22.22 1.86 133 108 24 24 0 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
2097 1odh -0.25 23.15 1.93 183 108 25 24 1 2 d.239.1.1 MGCM1 & DNA & DNA
2098 2lt7 -0.25 24.07 1.94 171 108 26 23 3 0 No_SCOP_id TRANSCRIPTIONAL REGULATOR KAISO & DNA & DNA
2099 3c2i -0.25 23.15 1.96 108 108 25 23 2 3 No_SCOP_id METHYL-CPG-BINDING PROTEIN 2 & DNA & DNA
2100 3cbb -0.25 23.15 1.97 196 108 25 25 0 2 g.39.1.2 HEPATOCYTE NUCLEAR FACTOR 4-ALPHA, DNA BINDING DOMAIN & HEPATOCYTE NUCLEAR FACTOR 4-ALPHA PROMOTER ELEMENT DNA & HEPATOCYTE NUCLEAR FACTOR 4-ALPHA PROMOTER ELEMENT DNA
2101 1ais -0.25 25.00 1.99 406 108 27 27 0 2 a.74.1.2;d.129.1.1 DNA & PROTEIN (TRANSCRIPTION INITIATION FACTOR IIB)
2102 1a6y -0.25 25.00 2.03 201 108 27 27 0 4 g.39.1.2 DNA & ORPHAN NUCLEAR RECEPTOR NR1D1
2103 3u6y -0.25 25.93 2.06 208 108 28 27 1 2 d.68.6.0 DNA/RNA-BINDING PROTEIN ALBA 2 & DNA & DNA
2104 2dnj -0.25 25.93 2.09 267 108 28 28 0 3 d.151.1.1 DNA & DEOXYRIBONUCLEASE I
2105 2z33 -0.25 26.85 2.09 136 108 29 29 0 4 a.4.6.1 PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN PHOB & DNA & DNA
2106 1r4r -0.25 26.85 2.11 188 108 29 27 2 3 g.39.1.2 DNA & GLUCOCORTICOID RECEPTOR
2107 4hid -0.25 24.07 2.11 147 108 26 26 0 2 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2108 3h15 -0.25 27.78 2.28 176 108 30 30 0 4 No_SCOP_id PROTEIN MCM10 HOMOLOG & DNA
2109 3lwh -0.27 21.33 1.96 75 108 16 16 0 0 No_SCOP_id CHROMATIN PROTEIN CREN7 & DNA
2110 1bnz -0.27 16.25 1.30 80 108 13 13 0 1 b.34.13.1 DNA & DNA-BINDING PROTEIN 7A
2111 3v7e -0.29 14.81 0.83 410 108 16 16 0 2 No_SCOP_id RIBOSOME-ASSOCIATED PROTEIN L7AE-LIKE & SAM-I RIBOSWITCH APTAMER WITH AN ENGINEERED HELIX P3
2112 2etw -0.29 16.67 1.24 324 108 18 18 0 2 b.2.5.7 DNA & NDT80 PROTEIN
2113 3cul -0.29 16.67 1.32 359 108 18 18 0 4 d.58.7.1 U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & RNA (92-MER) & RNA (92-MER)
2114 2heo -0.29 20.37 1.67 129 108 22 22 0 2 a.4.5.19 DNA & Z-DNA BINDING PROTEIN 1
2115 2ief -0.29 20.37 1.70 230 108 22 22 0 1 a.6.1.7 15-MER DNA & 19-MER DNA & 34-MER DNA & EXCISIONASE
2116 3swm -0.29 21.30 1.76 608 108 23 22 1 1 No_SCOP_id NAC DOMAIN-CONTAINING PROTEIN 19 & OLIGONUCLEOTIDE FORWARD & OLIGONUCLEOTIDE REVERSE
2117 1f6o -0.29 21.30 1.78 236 108 23 23 0 2 b.46.1.2 DNA & 3-METHYL-ADENINE DNA GLYCOSYLASE
2118 4f6n -0.29 21.30 1.83 153 108 23 20 3 0 No_SCOP_id TRANSCRIPTIONAL REGULATOR KAISO & DNA & DNA
2119 2zkf -0.29 21.30 1.84 230 108 23 23 0 1 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
2120 3igl -0.29 22.22 1.87 208 108 24 24 0 0 b.2.5.2 CELLULAR TUMOR ANTIGEN P53 & DNA
2121 1pue -0.29 25.00 1.91 241 108 27 27 0 4 a.4.5.21 DNA & PROTEIN (TRANSCRIPTION FACTOR PU.1 (TF PU.1))
2122 1m07 -0.29 23.15 1.93 228 108 25 25 0 4 d.5.1.1 DNA & RIBONUCLEASE
2123 1f4r -0.29 23.15 1.99 222 108 25 25 0 2 b.46.1.2 DNA & 3-METHYL-ADENINE DNA GLYCOSYLASE
2124 1l1m -0.29 25.00 2.00 170 108 27 26 1 1 a.35.1.5 LACTOSE OPERON REPRESSOR & DNA & DNA
2125 3fc3 -0.29 22.22 2.00 395 108 24 24 0 0 No_SCOP_id RESTRICTION ENDONUCLEASE HPY99I & 5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3' & 5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3'
2126 2kmk -0.29 22.22 2.03 114 108 24 22 2 2 g.37.1.0 ZINC FINGER PROTEIN GFI-1 & DNA & DNA
2127 3q0d -0.29 25.93 2.22 304 108 28 27 1 4 No_SCOP_id HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 & DNA & DNA
2128 1bj6 -0.31 27.66 2.28 47 108 13 13 0 1 g.40.1.1 DNA & NUCLEOCAPSID PROTEIN 7
2129 2es2 -0.31 25.00 2.16 72 108 18 17 1 1 b.40.4.5 DNA & COLD SHOCK PROTEIN CSPB
2130 7gat -0.31 17.39 1.48 92 108 16 16 0 3 g.39.1.1 DNA & NITROGEN REGULATORY PROTEIN AREA
2131 1ig4 -0.32 18.56 1.67 97 108 18 18 0 0 d.10.1.3 METHYL-CPG BINDING PROTEIN & DNA
2132 1a1k -0.32 20.56 1.58 107 108 22 21 1 0 g.37.1.1 DNA & RADR ZIF268 VARIANT
2133 3co6 -0.33 16.67 1.38 123 108 18 18 0 2 a.4.5.14 FORKHEAD BOX PROTEIN O1 & DNA & DNA
2134 3gyh -0.33 17.59 1.48 134 108 19 19 0 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
2135 4rve -0.33 21.30 1.74 750 108 23 23 0 3 c.52.1.2 DNA & PROTEIN (ECO RV (E.C.3.1.21.4))
2136 3ode -0.33 21.30 1.84 216 108 23 22 1 2 No_SCOP_id POLY [ADP-RIBOSE] POLYMERASE 1 & DNA & DNA
2137 1i3j -0.33 21.30 1.89 138 108 23 13 10 1 d.285.1.1 DNA & INTRON-ASSOCIATED ENDONUCLEASE 1
2138 4aa6 -0.33 24.07 1.92 348 108 26 26 0 1 No_SCOP_id ESTROGEN RECEPTOR & DNA & DNA
2139 4hja -0.33 22.22 1.93 150 108 24 24 0 1 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2140 3gox -0.33 22.22 1.94 398 108 24 24 0 0 No_SCOP_id RESTRICTION ENDONUCLEASE HPY99I & 5'-(*DCP*DTP*DCP*DGP*DAP*DCP*DGP*DTP*DAP*DGP*DA)-3' & 5'-(*DTP*DAP*DCP*DGP*DTP*DCP*DGP*DAP*DGP*DTP*DC)-3'
2141 2zo2 -0.33 22.22 1.98 225 108 24 24 0 3 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA
2142 2as5 -0.33 25.00 2.04 824 108 27 16 11 4 a.4.5.0;b.1.18.1;b.2.5.3 DNA & FORKHEAD BOX PROTEIN P2
2143 2vw9 -0.33 21.30 2.04 237 108 23 23 0 0 b.40.4.0 SINGLE-STRANDED DNA BINDING PROTEIN & POLY-DT
2144 3cro -0.33 24.07 2.11 170 108 26 25 1 1 a.35.1.2 DNA & PROTEIN (434 CRO)
2145 2jzw -0.34 25.86 2.07 58 108 15 14 1 1 No_SCOP_id HIV-1 NUCLEOCAPSID PROTEIN NCP7(12-55) & DNA
2146 1a1j -0.34 20.75 1.86 106 108 22 20 2 2 g.37.1.1 DNA & PROTEIN (RADR ZIF268 ZINC FINGER PEPTIDE)
2147 1zaa -0.36 22.43 1.89 107 108 24 24 0 2 g.37.1.1 DNA & PROTEIN (ZIF268)
2148 2evf -0.37 16.67 1.39 317 108 18 18 0 2 b.2.5.7 DNA & NDT80 PROTEIN
2149 3f8j -0.37 15.74 1.39 229 108 17 17 0 1 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
2150 2ko0 -0.37 16.67 1.46 119 108 18 18 0 1 No_SCOP_id THAP DOMAIN-CONTAINING PROTEIN 1 & RRM1 & ZINC ION
2151 2drp -0.37 16.67 1.54 204 108 18 17 1 3 g.37.1.1 DNA & PROTEIN (TRAMTRACK DNA-BINDING DOMAIN)
2152 2evh -0.37 19.44 1.62 317 108 21 21 0 2 b.2.5.7 DNA & NDT80 PROTEIN
2153 1p47 -0.37 18.52 1.65 215 108 20 20 0 0 g.37.1.1 DNA & EARLY GROWTH RESPONSE PROTEIN 1
2154 1brn -0.37 17.59 1.68 222 108 19 19 0 1 d.1.1.2 DNA & PROTEIN (BARNASE (E.C.3.1.27.-))
2155 3jrb -0.37 21.30 1.70 243 108 23 22 1 2 a.4.1.12 DNA-BINDING PROTEIN FIS & DNA (27-MER) & DNA (27-MER)
2156 2stt -0.37 18.52 1.72 130 108 20 12 8 3 a.4.5.21 DNA & ETS1
2157 2euw -0.37 20.37 1.85 317 108 22 22 0 3 b.2.5.7 DNA & NDT80 PROTEIN
2158 3qlp -0.37 23.15 1.91 308 108 25 25 0 0 No_SCOP_id THROMBIN HEAVY CHAIN & THROMBIN LIGHT CHAIN & MODIFIED THROMBIN BINDING DNA APTAMER
2159 4hj8 -0.37 22.22 1.92 147 108 24 24 0 2 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2160 4hc9 -0.37 22.22 1.98 145 108 24 15 9 3 No_SCOP_id TRANS-ACTING T-CELL-SPECIFIC TRANSCRIPTION FACTOR GATA-3 & DNA & DNA
2161 1u1k -0.37 21.30 2.00 193 108 23 23 0 3 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2162 2euz -0.37 21.30 2.03 317 108 23 23 0 4 b.2.5.7 DNA & NDT80 PROTEIN
2163 2evg -0.37 21.30 2.07 317 108 23 23 0 4 b.2.5.7 DNA & NDT80 PROTEIN
2164 2o93 -0.37 24.07 2.20 908 108 26 22 4 5 b.1.18.1;b.2.5.3 KAPPAB ENHANCER ELEMENT, DNA 25-MER & KAPPAB ENHANCER ELEMENT, DNA 25-MER & ACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2
2165 1a34 -0.37 26.85 2.25 167 108 29 29 0 2 b.121.7.1 PROTEIN (SATELLITE TOBACCO MOSAIC VIRUS) & RNA (5'-R(P*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3') & RNA (5'-R(P*UP*UP*UP*UP*UP*UP*UP*UP*UP*U)-3')
2166 1a1h -0.40 25.23 2.13 107 108 27 27 0 1 g.37.1.1 DNA & QGSR ZINC FINGER PEPTIDE
2167 5gat -0.41 22.83 1.86 92 108 21 21 0 1 g.39.1.1 DNA & NITROGEN REGULATORY PROTEIN AREA
2168 3uby -0.41 17.59 1.47 397 108 19 19 0 1 b.46.1.2 DNA-3-METHYLADENINE GLYCOSYLASE & DNA
2169 1ga5 -0.41 17.59 1.56 398 108 19 19 0 0 g.39.1.2 DNA & ORPHAN NUCLEAR RECEPTOR NR1D1
2170 3muv -0.41 18.52 1.58 180 108 20 17 3 2 No_SCOP_id U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A & G20A/C92U MUTANT C-DI-GMP RIBOSWITCH
2171 1cjg -0.41 19.44 1.73 168 108 21 21 0 0 a.35.1.5 PROTEIN (LAC REPRESSOR) & DNA
2172 2evi -0.41 21.30 2.05 317 108 23 23 0 4 b.2.5.7 DNA & NDT80 PROTEIN
2173 1mnn -0.41 21.30 2.06 318 108 23 23 0 4 b.2.5.7 DNA & NDT80 PROTEIN
2174 2eux -0.41 21.30 2.06 318 108 23 23 0 4 b.2.5.7 DNA & NDT80 PROTEIN
2175 1fyl -0.41 26.85 2.22 178 108 29 29 0 1 a.4.5.22 HEAD-TO-HEAD HSE & HEAT SHOCK FACTOR PROTEIN
2176 2fz2 -0.41 26.85 2.26 545 108 29 29 0 1 b.121.4.6 COAT PROTEIN & 5'-R(*CP*CP*C)-3'
2177 2exf -0.42 20.69 1.95 58 108 12 12 0 1 g.40.1.1 NUCLEOCAPSID PROTEIN* (NC*) & DNA
2178 3qmc -0.43 20.78 1.84 77 108 16 16 0 1 No_SCOP_id CPG-BINDING PROTEIN & DNA & DNA
2179 4ew4 -0.46 16.67 1.31 163 108 18 18 0 0 No_SCOP_id METHYL-CPG-BINDING DOMAIN PROTEIN 4 & DNA & DNA
2180 2lbs -0.46 16.67 1.38 122 108 18 18 0 1 d.50.1.1 RNA (32-MER) & RIBONUCLEASE 3
2181 2f03 -0.46 16.67 1.45 555 108 18 18 0 3 No_SCOP_id DNA & TYPE II RESTRICTION ENZYME SFII
2182 1gxp -0.46 17.59 1.47 500 108 19 19 0 0 a.4.6.1 PHOSPHATE REGULON TRANSCRIPTIONAL REGULATORY PROTEIN & DNA & DNA
2183 2euv -0.46 18.52 1.50 315 108 20 20 0 2 b.2.5.7 DNA & NDT80 PROTEIN
2184 2zke -0.46 21.30 1.94 233 108 23 22 1 1 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
2185 1g2f -0.46 22.22 2.08 240 108 24 24 0 0 k.12.1.1 DNA & TATA BOX ZINC FINGER PROTEIN
2186 4hdv -0.46 25.00 2.10 133 108 27 25 2 1 No_SCOP_id ALKYLTRANSFERASE-LIKE PROTEIN 1 & DNA & DNA
2187 1oj8 -0.46 25.00 2.25 108 108 27 27 0 4 d.5.1.1 RC-RNASE6 RIBONUCLEASE & DNA
2188 1tf3 -0.50 18.52 1.82 122 108 20 20 0 1 g.37.1.1 5S RNA GENE & 5S RNA GENE & TRANSCRIPTION FACTOR IIIA
2189 2nz4 -0.50 19.44 1.84 972 108 21 20 1 4 d.58.7.1 SUBSTRATE STRAND RNA 13-MER & GLMS RIBOZYME & U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A
2190 4dpv -0.50 23.15 2.12 570 108 25 25 0 0 b.121.5.2 PROTEIN (PARVOVIRUS COAT PROTEIN) & DNA
2191 2kkf -0.51 18.52 1.93 81 108 15 15 0 3 No_SCOP_id HISTONE-LYSINE N-METHYLTRANSFERASE HRX & DNA
2192 4hj9 -0.54 12.96 0.94 149 108 14 14 0 3 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2193 3ciy -0.54 19.44 2.01 1421 108 21 21 0 1 No_SCOP_id TOLL-LIKE RECEPTOR 3 & 46-MER & 46-MER
2194 1u1q -0.54 20.37 2.03 194 108 22 22 0 5 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2195 3swp -0.54 23.15 2.07 608 108 25 25 0 2 No_SCOP_id NAC DOMAIN-CONTAINING PROTEIN 19 & OLIGONUCLEOTIDE FORWARD & OLIGONUCLEOTIDE REVERSE
2196 3dd2 -0.54 21.30 2.10 303 108 23 23 0 0 No_SCOP_id THROMBIN LIGHT CHAIN & THROMBIN HEAVY CHAIN & RNA (26-MER)
2197 1msf -0.54 22.22 2.12 127 108 24 24 0 1 a.4.1.3 DNA & C-MYB DNA-BINDING DOMAIN
2198 1u1r -0.54 22.22 2.12 193 108 24 24 0 5 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2199 1p7h -0.54 21.30 2.25 1204 108 23 20 3 7 b.1.18.1;b.2.5.3 DNA & NUCLEAR FACTOR OF ACTIVATED T-CELLS, CYTOPLASMIC 2
2200 3qmd -0.54 20.78 2.03 77 108 16 16 0 1 No_SCOP_id CPG-BINDING PROTEIN & DNA & DNA
2201 1rbj -0.58 17.59 1.86 128 108 19 19 0 1 d.5.1.1 DNA & PROTEIN (RIBONUCLEASE B (E.C.3.1.27.5))
2202 1u1l -0.58 20.37 2.03 193 108 22 22 0 5 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2203 1u1m -0.58 20.37 2.04 193 108 22 22 0 5 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2204 1u1o -0.58 20.37 2.04 194 108 22 22 0 5 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2205 1u1p -0.58 20.37 2.04 193 108 22 22 0 5 d.58.7.1 DNA & HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1
2206 1jk2 -0.61 14.95 1.37 107 108 16 16 0 0 g.37.1.1 DNA & ZIF268
2207 3q0c -0.62 12.96 1.23 310 108 14 14 0 1 No_SCOP_id HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 & DNA
2208 2l1g -0.62 12.96 1.28 119 108 14 14 0 0 g.39.1.0 THAP DOMAIN-CONTAINING PROTEIN 1 & DNA & DNA
2209 3q0f -0.62 14.81 1.49 311 108 16 15 1 3 No_SCOP_id HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 & DNA & DNA
2210 4hio -0.62 16.67 1.58 148 108 18 18 0 3 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2211 3bs1 -0.62 17.59 1.73 133 108 19 14 5 4 No_SCOP_id ACCESSORY GENE REGULATOR PROTEIN A & DNA & DNA
2212 2k1n -0.62 17.59 1.82 270 108 19 17 2 2 No_SCOP_id TRANSITION STATE REGULATORY PROTEIN ABRB & DNA (25-MER) & DNA (25-MER)
2213 1r4i -0.62 19.44 1.95 181 108 21 21 0 1 g.39.1.2 DNA & ANDROGEN RECEPTOR
2214 1ewn -0.62 23.15 2.16 223 108 25 24 1 1 b.46.1.2 DNA & 3-METHYL-ADENINE DNA GLYCOSYLASE
2215 3lwi -0.62 25.00 2.35 148 108 27 24 3 2 No_SCOP_id CHROMATIN PROTEIN CREN7 & DNA
2216 1f5e -0.64 12.94 1.09 85 108 11 11 0 1 g.38.1.1 DNA & ETHANOL REGULON TRANSCRIPTIONAL FACTOR
2217 3q0b -0.66 12.96 1.23 155 108 14 14 0 1 No_SCOP_id HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH5 & DNA
2218 4him -0.66 13.89 1.30 147 108 15 15 0 1 No_SCOP_id PROTECTION OF TELOMERES PROTEIN 1 & DNA
2219 3dfv -0.66 14.81 1.38 152 108 16 16 0 3 g.39.1.1 TRANS-ACTING T-CELL-SPECIFIC TRANSCRIPTION FACTOR GATA-3 & DNA & DNA
2220 1bnk -0.66 14.81 1.67 225 108 16 16 0 2 b.46.1.2 DNA & PROTEIN (3-METHYLADENINE DNA GLYCOSYLASE)
2221 4hp1 -0.70 16.44 1.90 73 108 12 12 0 2 No_SCOP_id DNA & LOC100036628 PROTEIN
2222 2zo1 -0.70 12.96 1.34 226 108 14 14 0 1 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
2223 2zo0 -0.70 12.96 1.41 234 108 14 14 0 3 b.122.1.12 E3 UBIQUITIN-PROTEIN LIGASE UHRF1 & DNA & DNA
2224 1hjc -0.70 21.30 2.27 300 108 23 23 0 0 b.2.5.6 RUNT-RELATED TRANSCRIPTION FACTOR 1 & DNA & DNA
2225 3qmb -0.73 17.95 1.91 78 108 14 14 0 1 No_SCOP_id CPG-BINDING PROTEIN & DNA
2226 2eze -0.74 12.24 0.95 49 108 6 6 0 1 j.10.1.1 DNA & HIGH MOBILITY GROUP PROTEIN HMG-I/HMG-Y
2227 1d6k -0.74 12.04 0.89 131 108 13 13 0 0 b.53.1.1 RIBOSOMAL PROTEIN L25 & 5S RRNA E-LOOP (5SE)
2228 4dii -0.74 13.89 1.49 292 108 15 15 0 0 No_SCOP_id PROTHROMBIN & PROTHROMBIN & THROMBIN BINDING APTAMER
2229 4a75 -0.74 16.67 1.97 372 108 18 18 0 0 b.40.4.0 LIN28 COLD SHOCK DOMAIN & DNA
2230 1eyg -0.78 11.11 1.07 491 108 12 12 0 1 b.40.4.3 SINGLE STRANDED 28-MER OF D(C) & SINGLE-STRAND DNA-BINDING PROTEIN
2231 2lex -0.82 14.46 1.72 83 108 12 12 0 3 g.79.1.1 PROBABLE WRKY TRANSCRIPTION FACTOR 4 & DNA & DNA
2232 4a76 -0.83 23.15 2.31 368 108 25 23 2 3 b.40.4.0 LIN28 COLD SHOCK DOMAIN & DNA
2233 1bbx -0.91 12.04 1.47 150 108 13 13 0 1 b.34.13.1 DNA & DNA-BINDING PROTEIN 7D
2234 3pf5 -0.95 13.89 1.77 139 108 15 15 0 3 b.40.4.5 COLD SHOCK PROTEIN CSPB & HEXARIBOURACIL (RU6)
2235 1u6p -1.03 13.89 1.84 156 108 15 13 2 0 g.40.1.1 GAG POLYPROTEIN & 101-MER
2236 3uxw -1.11 12.96 1.97 130 108 14 9 5 1 No_SCOP_id DODECAMER DNA & A-T HOOK PEPTIDE
2237 3pf4 -1.11 17.59 2.22 137 108 19 19 0 2 b.40.4.5 COLD SHOCK PROTEIN CSPB & HEXARIBONUCLEOTIDE (RGUCUUUA)
2238 4hqx -1.14 12.26 1.95 106 108 13 13 0 1 No_SCOP_id PLATELET-DERIVED GROWTH FACTOR SUBUNIT B & SOMAMER SL4
2239 4hqu -1.14 12.26 1.98 106 108 13 13 0 1 No_SCOP_id PLATELET-DERIVED GROWTH FACTOR SUBUNIT B & SOMAMER SL5
2240 2hax -1.16 12.04 1.99 144 108 13 13 0 1 b.40.4.5 DNA & COLD SHOCK PROTEIN CSPB

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