Server For Computing/Predicting DEPTH, Cavity Sizes, Ligand Binding Sites and pKa

Download

Depth

  • tar -xvzf depth_source.tar.gz
  • cd depth_source/bin
  • make
  • ./DEPTH -i 2grn.pdb -o 2grn
  • For options run ./DEPTH wihtout any inputs


If you want to run BindingSite with evolutionary information using Blast download database from UniProt